Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 RPL31P50-201ENST00000471002 296 ntBASIC1.94□□□□□ -2.1
CPSF4LA6NMK7 AC011979.1-201ENST00000472300 483 ntBASIC1.94□□□□□ -2.1
CPSF4LA6NMK7 RPL21P93-201ENST00000480465 489 ntBASIC1.94□□□□□ -2.1
CPSF4LA6NMK7 AC233702.1-201ENST00000482905 502 ntBASIC1.94□□□□□ -2.1
CPSF4LA6NMK7 AC093591.1-201ENST00000491435 481 ntBASIC1.94□□□□□ -2.1
CPSF4LA6NMK7 RPL21P16-201ENST00000495531 483 ntBASIC1.94□□□□□ -2.1
CPSF4LA6NMK7 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.94□□□□□ -2.1
CPSF4LA6NMK7 CCNHP1-201ENST00000513311 678 ntBASIC1.94□□□□□ -2.1
CPSF4LA6NMK7 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.94□□□□□ -2.1
CPSF4LA6NMK7 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.94□□□□□ -2.1
CPSF4LA6NMK7 ZNF192P1-203ENST00000565888 810 ntBASIC1.94□□□□□ -2.1
CPSF4LA6NMK7 MIR4458-201ENST00000578872 75 ntBASIC1.94□□□□□ -2.1
CPSF4LA6NMK7 AC008687.2-201ENST00000597865 520 ntBASIC1.94□□□□□ -2.1
CPSF4LA6NMK7 AL121917.1-203ENST00000605534 577 ntBASIC1.94□□□□□ -2.1
CPSF4LA6NMK7 AC011890.2-201ENST00000613393 294 ntBASIC1.94□□□□□ -2.1
CPSF4LA6NMK7 AC004696.1-201ENST00000614345 607 ntBASIC1.94□□□□□ -2.1
CPSF4LA6NMK7 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC1.94□□□□□ -2.1
CPSF4LA6NMK7 MTND5P6-201ENST00000422338 1798 ntBASIC1.94□□□□□ -2.1
CPSF4LA6NMK7 AC110774.1-201ENST00000623567 2018 ntBASIC1.94□□□□□ -2.1
CPSF4LA6NMK7 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CPSF4LA6NMK7 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CPSF4LA6NMK7 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.93□□□□□ -2.1
CPSF4LA6NMK7 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CPSF4LA6NMK7 RNA5SP37-201ENST00000365420 130 ntBASIC1.93□□□□□ -2.1
CPSF4LA6NMK7 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CPSF4LA6NMK7 SNORA11.4-201ENST00000408823 129 ntBASIC1.93□□□□□ -2.1
CPSF4LA6NMK7 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC1.93□□□□□ -2.1
CPSF4LA6NMK7 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC1.93□□□□□ -2.1
CPSF4LA6NMK7 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.93□□□□□ -2.1
CPSF4LA6NMK7 TRAPPC2P5-201ENST00000426293 308 ntBASIC1.93□□□□□ -2.1
CPSF4LA6NMK7 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC1.93□□□□□ -2.1
CPSF4LA6NMK7 ELOCP10-201ENST00000440624 327 ntBASIC1.93□□□□□ -2.1
CPSF4LA6NMK7 CLIC4P1-201ENST00000453177 535 ntBASIC1.93□□□□□ -2.1
CPSF4LA6NMK7 AC092754.2-201ENST00000463506 460 ntBASIC1.93□□□□□ -2.1
CPSF4LA6NMK7 AC025033.1-201ENST00000463883 194 ntBASIC1.93□□□□□ -2.1
CPSF4LA6NMK7 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC1.93□□□□□ -2.1
CPSF4LA6NMK7 MTND4LP22-201ENST00000508209 276 ntBASIC1.93□□□□□ -2.1
CPSF4LA6NMK7 RNU1-40P-201ENST00000516816 164 ntBASIC1.93□□□□□ -2.1
CPSF4LA6NMK7 RNU1-97P-201ENST00000516872 164 ntBASIC1.93□□□□□ -2.1
CPSF4LA6NMK7 AC021733.2-201ENST00000518830 497 ntBASIC1.93□□□□□ -2.1
CPSF4LA6NMK7 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC1.93□□□□□ -2.1
CPSF4LA6NMK7 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.93□□□□□ -2.1
CPSF4LA6NMK7 AC002984.1-201ENST00000591692 448 ntBASIC1.93□□□□□ -2.1
CPSF4LA6NMK7 ELOCP34-201ENST00000604436 327 ntBASIC1.93□□□□□ -2.1
CPSF4LA6NMK7 AL135786.2-201ENST00000608422 615 ntBASIC1.93□□□□□ -2.1
CPSF4LA6NMK7 AC005156.1-201ENST00000613371 573 ntBASIC1.93□□□□□ -2.1
CPSF4LA6NMK7 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CPSF4LA6NMK7 AC034102.8-201ENST00000615146 484 ntBASIC1.93□□□□□ -2.1
CPSF4LA6NMK7 MIR6873-201ENST00000622788 63 ntBASIC1.93□□□□□ -2.1
CPSF4LA6NMK7 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC1.93□□□□□ -2.1
CPSF4LA6NMK7 FO624990.1-201ENST00000636373 85 ntBASIC1.93□□□□□ -2.1
CPSF4LA6NMK7 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
CPSF4LA6NMK7 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CPSF4LA6NMK7 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CPSF4LA6NMK7 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.92□□□□□ -2.1
CPSF4LA6NMK7 MIR144-201ENST00000384886 86 ntBASIC1.92□□□□□ -2.1
CPSF4LA6NMK7 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CPSF4LA6NMK7 RPS4XP7-201ENST00000406274 780 ntBASIC1.92□□□□□ -2.1
CPSF4LA6NMK7 RNU4-53P-201ENST00000410828 140 ntBASIC1.92□□□□□ -2.1
CPSF4LA6NMK7 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.92□□□□□ -2.1
CPSF4LA6NMK7 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC1.92□□□□□ -2.1
CPSF4LA6NMK7 AL157827.1-201ENST00000447622 132 ntBASIC1.92□□□□□ -2.1
CPSF4LA6NMK7 VN1R48P-201ENST00000448149 1036 ntBASIC1.92□□□□□ -2.1
CPSF4LA6NMK7 OR5H5P-201ENST00000503164 928 ntBASIC1.92□□□□□ -2.1
CPSF4LA6NMK7 MTCO1P30-201ENST00000515244 580 ntBASIC1.92□□□□□ -2.1
CPSF4LA6NMK7 RNU6-56P-201ENST00000516986 93 ntBASIC1.92□□□□□ -2.1
CPSF4LA6NMK7 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
CPSF4LA6NMK7 AP002812.4-201ENST00000532139 286 ntBASIC1.92□□□□□ -2.1
CPSF4LA6NMK7 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC1.92□□□□□ -2.1
CPSF4LA6NMK7 AC006270.2-201ENST00000578523 652 ntBASIC1.92□□□□□ -2.1
CPSF4LA6NMK7 OR4K7P-201ENST00000580232 945 ntBASIC1.92□□□□□ -2.1
CPSF4LA6NMK7 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CPSF4LA6NMK7 AC079089.3-201ENST00000603094 673 ntBASIC1.92□□□□□ -2.1
CPSF4LA6NMK7 AC009314.1-201ENST00000603871 304 ntBASIC1.92□□□□□ -2.1
CPSF4LA6NMK7 AC090953.1-201ENST00000604305 1092 ntBASIC1.92□□□□□ -2.1
CPSF4LA6NMK7 AC092954.1-201ENST00000609121 445 ntBASIC1.92□□□□□ -2.1
CPSF4LA6NMK7 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC1.92□□□□□ -2.1
CPSF4LA6NMK7 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.92□□□□□ -2.1
CPSF4LA6NMK7 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC1.92□□□□□ -2.1
CPSF4LA6NMK7 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.92□□□□□ -2.1
CPSF4LA6NMK7 CU459211.1-201ENST00000635667 749 ntBASIC1.92□□□□□ -2.1
CPSF4LA6NMK7 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CPSF4LA6NMK7 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CPSF4LA6NMK7 AL139811.1-201ENST00000424779 2299 ntBASIC1.92□□□□□ -2.1
CPSF4LA6NMK7 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.92□□□□□ -2.1
CPSF4LA6NMK7 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
CPSF4LA6NMK7 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
CPSF4LA6NMK7 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
CPSF4LA6NMK7 RNA5SP167-201ENST00000365461 116 ntBASIC1.91□□□□□ -2.1
CPSF4LA6NMK7 RNU1-73P-201ENST00000383971 164 ntBASIC1.91□□□□□ -2.1
CPSF4LA6NMK7 ARF4P3-201ENST00000397387 509 ntBASIC1.91□□□□□ -2.1
CPSF4LA6NMK7 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.91□□□□□ -2.1
CPSF4LA6NMK7 RNA5SP338-201ENST00000410495 85 ntBASIC1.91□□□□□ -2.1
CPSF4LA6NMK7 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.91□□□□□ -2.1
CPSF4LA6NMK7 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC1.91□□□□□ -2.1
CPSF4LA6NMK7 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
CPSF4LA6NMK7 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.91□□□□□ -2.1
CPSF4LA6NMK7 USP9YP8-201ENST00000441913 500 ntBASIC1.91□□□□□ -2.1
CPSF4LA6NMK7 DPPA3P1-201ENST00000448050 469 ntBASIC1.91□□□□□ -2.1
CPSF4LA6NMK7 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms