Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.29□□□□□ -2.04
TRAV17A0A0B4J275 RNU4-60P-201ENST00000517239 135 ntBASIC2.29□□□□□ -2.04
TRAV17A0A0B4J275 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.29□□□□□ -2.04
TRAV17A0A0B4J275 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
TRAV17A0A0B4J275 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.29□□□□□ -2.04
TRAV17A0A0B4J275 AL355836.1-201ENST00000555951 870 ntBASIC2.29□□□□□ -2.04
TRAV17A0A0B4J275 AC009063.1-201ENST00000563342 702 ntBASIC2.29□□□□□ -2.04
TRAV17A0A0B4J275 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC2.29□□□□□ -2.04
TRAV17A0A0B4J275 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.29□□□□□ -2.04
TRAV17A0A0B4J275 AC006116.7-201ENST00000590141 756 ntBASIC2.29□□□□□ -2.04
TRAV17A0A0B4J275 AP003117.1-201ENST00000602771 554 ntBASIC2.29□□□□□ -2.04
TRAV17A0A0B4J275 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.29□□□□□ -2.04
TRAV17A0A0B4J275 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.29□□□□□ -2.04
TRAV17A0A0B4J275 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
TRAV17A0A0B4J275 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.29□□□□□ -2.04
TRAV17A0A0B4J275 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
TRAV17A0A0B4J275 ZNF658B-202ENST00000615961 3375 ntBASIC2.29□□□□□ -2.04
TRAV17A0A0B4J275 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.28□□□□□ -2.04
TRAV17A0A0B4J275 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
TRAV17A0A0B4J275 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
TRAV17A0A0B4J275 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
TRAV17A0A0B4J275 AC096656.1-201ENST00000623826 1364 ntBASIC2.28□□□□□ -2.04
TRAV17A0A0B4J275 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
TRAV17A0A0B4J275 MIR518C-201ENST00000384822 101 ntBASIC2.28□□□□□ -2.04
TRAV17A0A0B4J275 MIR320B1-201ENST00000390209 79 ntBASIC2.28□□□□□ -2.04
TRAV17A0A0B4J275 AL355379.1-201ENST00000405542 640 ntBASIC2.28□□□□□ -2.04
TRAV17A0A0B4J275 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.28□□□□□ -2.04
TRAV17A0A0B4J275 AC080125.1-201ENST00000414888 684 ntBASIC2.28□□□□□ -2.04
TRAV17A0A0B4J275 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
TRAV17A0A0B4J275 NPM1P11-201ENST00000417106 855 ntBASIC2.28□□□□□ -2.04
TRAV17A0A0B4J275 AC104332.2-201ENST00000429959 156 ntBASIC2.28□□□□□ -2.04
TRAV17A0A0B4J275 FCF1P1-201ENST00000432690 571 ntBASIC2.28□□□□□ -2.04
TRAV17A0A0B4J275 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
TRAV17A0A0B4J275 AL590103.1-201ENST00000434488 307 ntBASIC2.28□□□□□ -2.04
TRAV17A0A0B4J275 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.28□□□□□ -2.04
TRAV17A0A0B4J275 RPL37P6-202ENST00000464216 403 ntBASIC2.28□□□□□ -2.04
TRAV17A0A0B4J275 RPL23AP11-201ENST00000475260 469 ntBASIC2.28□□□□□ -2.04
TRAV17A0A0B4J275 AC126182.1-201ENST00000478134 357 ntBASIC2.28□□□□□ -2.04
TRAV17A0A0B4J275 RN7SL636P-201ENST00000497504 294 ntBASIC2.28□□□□□ -2.04
TRAV17A0A0B4J275 AC104986.1-201ENST00000517978 436 ntBASIC2.28□□□□□ -2.04
TRAV17A0A0B4J275 SEC11B-201ENST00000518383 499 ntBASIC2.28□□□□□ -2.04
TRAV17A0A0B4J275 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.28□□□□□ -2.04
TRAV17A0A0B4J275 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.28□□□□□ -2.04
TRAV17A0A0B4J275 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
TRAV17A0A0B4J275 AC128657.1-201ENST00000549459 145 ntBASIC2.28□□□□□ -2.04
TRAV17A0A0B4J275 SYF2P1-201ENST00000550658 413 ntBASIC2.28□□□□□ -2.04
TRAV17A0A0B4J275 MTCO3P24-201ENST00000572729 782 ntBASIC2.28□□□□□ -2.04
TRAV17A0A0B4J275 MIR5092-201ENST00000583139 88 ntBASIC2.28□□□□□ -2.04
TRAV17A0A0B4J275 NF1P5-201ENST00000588287 448 ntBASIC2.28□□□□□ -2.04
TRAV17A0A0B4J275 YWHAQP7-201ENST00000603536 658 ntBASIC2.28□□□□□ -2.04
TRAV17A0A0B4J275 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
TRAV17A0A0B4J275 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.28□□□□□ -2.05
TRAV17A0A0B4J275 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
TRAV17A0A0B4J275 AC092447.7-201ENST00000422212 1621 ntBASIC2.28□□□□□ -2.05
TRAV17A0A0B4J275 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
TRAV17A0A0B4J275 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
TRAV17A0A0B4J275 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
TRAV17A0A0B4J275 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.27□□□□□ -2.05
TRAV17A0A0B4J275 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.27□□□□□ -2.05
TRAV17A0A0B4J275 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
TRAV17A0A0B4J275 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.27□□□□□ -2.05
TRAV17A0A0B4J275 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
TRAV17A0A0B4J275 AL359511.1-201ENST00000402970 211 ntBASIC2.27□□□□□ -2.05
TRAV17A0A0B4J275 AL354719.1-201ENST00000406535 843 ntBASIC2.27□□□□□ -2.05
TRAV17A0A0B4J275 SNORA3.2-201ENST00000408221 125 ntBASIC2.27□□□□□ -2.05
TRAV17A0A0B4J275 RNA5SP425-201ENST00000410336 112 ntBASIC2.27□□□□□ -2.05
TRAV17A0A0B4J275 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.27□□□□□ -2.05
TRAV17A0A0B4J275 RPS20P25-201ENST00000412447 352 ntBASIC2.27□□□□□ -2.05
TRAV17A0A0B4J275 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC2.27□□□□□ -2.05
TRAV17A0A0B4J275 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.27□□□□□ -2.05
TRAV17A0A0B4J275 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
TRAV17A0A0B4J275 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.27□□□□□ -2.05
TRAV17A0A0B4J275 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.27□□□□□ -2.05
TRAV17A0A0B4J275 HIGD1AP2-201ENST00000446367 280 ntBASIC2.27□□□□□ -2.05
TRAV17A0A0B4J275 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
TRAV17A0A0B4J275 RPL36AP33-201ENST00000450395 310 ntBASIC2.27□□□□□ -2.05
TRAV17A0A0B4J275 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
TRAV17A0A0B4J275 HMGB1P25-201ENST00000468402 607 ntBASIC2.27□□□□□ -2.05
TRAV17A0A0B4J275 RPL30P11-201ENST00000495304 339 ntBASIC2.27□□□□□ -2.05
TRAV17A0A0B4J275 AC147055.1-201ENST00000509261 750 ntBASIC2.27□□□□□ -2.05
TRAV17A0A0B4J275 RNU1-41P-201ENST00000516161 162 ntBASIC2.27□□□□□ -2.05
TRAV17A0A0B4J275 RNU1-48P-201ENST00000516400 162 ntBASIC2.27□□□□□ -2.05
TRAV17A0A0B4J275 AC239860.2-201ENST00000525886 270 ntBASIC2.27□□□□□ -2.05
TRAV17A0A0B4J275 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC2.27□□□□□ -2.05
TRAV17A0A0B4J275 EIF5A2P1-201ENST00000564027 460 ntBASIC2.27□□□□□ -2.05
TRAV17A0A0B4J275 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.27□□□□□ -2.05
TRAV17A0A0B4J275 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.27□□□□□ -2.05
TRAV17A0A0B4J275 AL627309.6-201ENST00000606857 840 ntBASIC2.27□□□□□ -2.05
TRAV17A0A0B4J275 AL136164.4-201ENST00000625013 2135 ntBASIC2.27□□□□□ -2.05
TRAV17A0A0B4J275 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.27□□□□□ -2.05
TRAV17A0A0B4J275 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
TRAV17A0A0B4J275 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
TRAV17A0A0B4J275 ZNF33CP-201ENST00000432492 2030 ntBASIC2.26□□□□□ -2.05
TRAV17A0A0B4J275 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
TRAV17A0A0B4J275 RNA5SP289-201ENST00000362332 137 ntBASIC2.26□□□□□ -2.05
TRAV17A0A0B4J275 RNU6-618P-201ENST00000363518 112 ntBASIC2.26□□□□□ -2.05
TRAV17A0A0B4J275 AC240504.1-201ENST00000395709 845 ntBASIC2.26□□□□□ -2.05
TRAV17A0A0B4J275 SNORD88.1-201ENST00000408684 91 ntBASIC2.26□□□□□ -2.05
TRAV17A0A0B4J275 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.26□□□□□ -2.05
TRAV17A0A0B4J275 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms