Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AL139039.1-201ENST00000401900 692 ntBASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 AC245096.1-201ENST00000413104 546 ntBASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 AC015977.1-201ENST00000418887 292 ntBASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 UBE2V1P4-201ENST00000425374 344 ntBASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 CEACAMP1-201ENST00000434624 1035 ntBASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 AC005077.1-201ENST00000449226 375 ntBASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 AC010631.1-201ENST00000474150 156 ntBASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 RPL12P20-201ENST00000475538 479 ntBASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 AC008945.1-201ENST00000505144 499 ntBASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 AC092436.3-201ENST00000511788 257 ntBASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 SCARNA18.1-201ENST00000516330 83 ntBASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 RNU6-406P-201ENST00000516470 107 ntBASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 SNORA40.14-201ENST00000516543 86 ntBASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 OR5D17P-201ENST00000531492 978 ntBASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 AL049779.3-201ENST00000557141 606 ntBASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 HMGN2P47-201ENST00000559378 272 ntBASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 RNU4ATAC-201ENST00000580972 127 ntBASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 HMGB1P50-201ENST00000605814 607 ntBASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 AL512329.2-201ENST00000607350 548 ntBASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 AC098479.1-201ENST00000609225 154 ntBASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 AC006329.2-201ENST00000611491 394 ntBASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 MIR6826-201ENST00000617808 98 ntBASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 MIR4272-201ENST00000635924 64 ntBASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
PCDHB11Q9Y5F2 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
PCDHB11Q9Y5F2 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.9□□□□□ -1.47
PCDHB11Q9Y5F2 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.9□□□□□ -1.47
PCDHB11Q9Y5F2 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
PCDHB11Q9Y5F2 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.9□□□□□ -1.47
PCDHB11Q9Y5F2 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 AC097461.1-201ENST00000568928 2821 ntBASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 OR52B3P-201ENST00000314715 928 ntBASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 Y_RNA.60-201ENST00000362831 98 ntBASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 RNU105B-201ENST00000364478 208 ntBASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 RNU6-339P-201ENST00000384310 107 ntBASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 AL096829.1-201ENST00000413677 457 ntBASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 RPS23P10-201ENST00000416185 486 ntBASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 RPL30P3-201ENST00000424262 333 ntBASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 AL590399.4-201ENST00000436561 601 ntBASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 AC105758.1-201ENST00000506038 399 ntBASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 Y_RNA.667-201ENST00000516212 107 ntBASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 AC007991.1-201ENST00000522680 631 ntBASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 CR383656.7-201ENST00000548164 174 ntBASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 AC063949.1-201ENST00000552900 865 ntBASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 AC068768.2-201ENST00000602352 343 ntBASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 AC103858.2-201ENST00000621471 543 ntBASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 AC074140.1-201ENST00000621617 208 ntBASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 AC073488.3-201ENST00000631611 778 ntBASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 AL049767.1-202ENST00000637826 242 ntBASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 DDX10P1-201ENST00000448545 1933 ntBASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PCDHB11Q9Y5F2 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDHB11Q9Y5F2 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHB11Q9Y5F2 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
PCDHB11Q9Y5F2 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms