Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 LARP1BP1-201ENST00000506036 1359 ntBASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 AL161781.1-201ENST00000354277 403 ntBASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 RNY4P16-201ENST00000364768 94 ntBASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 SNORA51.6-201ENST00000384151 125 ntBASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 RNU6-463P-201ENST00000384340 107 ntBASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 MIR649-201ENST00000384843 97 ntBASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 MIR137-201ENST00000385223 102 ntBASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 RNA5SP397-201ENST00000391323 118 ntBASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 AL357515.1-201ENST00000402967 542 ntBASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 AL035079.1-201ENST00000405210 287 ntBASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 RPS15AP12-201ENST00000419498 388 ntBASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 OR1AA1P-201ENST00000419597 916 ntBASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 AL451054.2-201ENST00000420896 202 ntBASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 BEND7P1-201ENST00000422058 457 ntBASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 PPIAP13-201ENST00000434706 478 ntBASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 HSPE1P28-201ENST00000443139 211 ntBASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 RPL7AP28-201ENST00000464513 571 ntBASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 AC010618.1-201ENST00000469924 477 ntBASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 AC027575.1-201ENST00000481064 460 ntBASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 Y_RNA.711-201ENST00000516993 102 ntBASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 CYCSP28-201ENST00000534284 321 ntBASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 AC133555.2-201ENST00000550213 292 ntBASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 AC068831.4-201ENST00000556118 109 ntBASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 FRG2DP-202ENST00000566967 323 ntBASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 HSPE1P14-201ENST00000605812 302 ntBASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 SSX9-202ENST00000608568 580 ntTSL 4 BASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 AL355472.4-201ENST00000610233 626 ntBASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 AC010632.3-201ENST00000611377 369 ntBASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 MIR6716-201ENST00000613413 80 ntBASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 AL078596.1-201ENST00000624856 447 ntBASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RTCBQ9Y3I0 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 AC083843.2-201ENST00000568248 6253 ntBASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 RNU6-441P-201ENST00000384545 106 ntBASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 RPL7P60-201ENST00000397636 735 ntBASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 AC018630.2-202ENST00000422992 927 ntBASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 AC137499.1-201ENST00000427602 88 ntBASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 IPO7P1-201ENST00000442031 636 ntBASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 AC000111.2-201ENST00000448200 210 ntBASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 RPL23AP41-201ENST00000484754 458 ntBASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 AL163540.1-201ENST00000485382 386 ntBASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 SRP72-202ENST00000504757 745 ntTSL 2 BASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 SCARNA24.1-201ENST00000516465 137 ntBASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 RNA5SP337-201ENST00000517007 109 ntBASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 LSM6P2-201ENST00000552208 177 ntBASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 AC023575.1-201ENST00000580510 358 ntBASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 AC124312.5-201ENST00000604451 268 ntBASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 AL022345.1-201ENST00000607292 135 ntBASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 AC130324.3-201ENST00000614165 542 ntBASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 MIR6133-201ENST00000617057 108 ntBASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 AC040168.1-201ENST00000623594 991 ntBASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 OR2L1P-202ENST00000641567 1023 ntBASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 PROS2P-201ENST00000474651 1951 ntBASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 MAPK10-338ENST00000641647 3362 ntBASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
RTCBQ9Y3I0 MTND5P1-201ENST00000445440 1375 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms