Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
VPS29Q9UBQ0 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
VPS29Q9UBQ0 AC123912.3-201ENST00000600907 1367 ntBASIC2.65□□□□□ -1.98
VPS29Q9UBQ0 RNU6-564P-201ENST00000410983 104 ntBASIC2.65□□□□□ -1.99
VPS29Q9UBQ0 RPL7P10-201ENST00000417407 739 ntBASIC2.65□□□□□ -1.99
VPS29Q9UBQ0 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.65□□□□□ -1.99
VPS29Q9UBQ0 MUPP-201ENST00000438111 566 ntBASIC2.65□□□□□ -1.99
VPS29Q9UBQ0 RABEPKP1-201ENST00000440529 1026 ntBASIC2.65□□□□□ -1.99
VPS29Q9UBQ0 RPS23P3-201ENST00000470993 430 ntBASIC2.65□□□□□ -1.99
VPS29Q9UBQ0 RPS29P26-201ENST00000477483 171 ntBASIC2.65□□□□□ -1.99
VPS29Q9UBQ0 AP001025.2-201ENST00000490908 477 ntBASIC2.65□□□□□ -1.99
VPS29Q9UBQ0 HMGB1P47-201ENST00000511281 589 ntBASIC2.65□□□□□ -1.99
VPS29Q9UBQ0 AC093770.1-201ENST00000511559 571 ntBASIC2.65□□□□□ -1.99
VPS29Q9UBQ0 AC139103.1-201ENST00000534696 1030 ntBASIC2.65□□□□□ -1.99
VPS29Q9UBQ0 AL133271.1-201ENST00000538229 291 ntBASIC2.65□□□□□ -1.99
VPS29Q9UBQ0 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.65□□□□□ -1.99
VPS29Q9UBQ0 AC022080.3-201ENST00000544433 482 ntBASIC2.65□□□□□ -1.99
VPS29Q9UBQ0 AC074029.2-201ENST00000551045 634 ntBASIC2.65□□□□□ -1.99
VPS29Q9UBQ0 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.65□□□□□ -1.99
VPS29Q9UBQ0 AC023043.3-201ENST00000593113 385 ntBASIC2.65□□□□□ -1.99
VPS29Q9UBQ0 AC008277.2-201ENST00000605196 797 ntBASIC2.65□□□□□ -1.99
VPS29Q9UBQ0 VIS1.1-201ENST00000610517 203 ntBASIC2.65□□□□□ -1.99
VPS29Q9UBQ0 AL442067.2-201ENST00000614033 363 ntBASIC2.65□□□□□ -1.99
VPS29Q9UBQ0 AC091046.2-201ENST00000620775 665 ntBASIC2.65□□□□□ -1.99
VPS29Q9UBQ0 AC073348.1-201ENST00000623002 331 ntBASIC2.65□□□□□ -1.99
VPS29Q9UBQ0 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.65□□□□□ -1.99
VPS29Q9UBQ0 MTND5P28-201ENST00000438005 1594 ntBASIC2.65□□□□□ -1.99
VPS29Q9UBQ0 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.65□□□□□ -1.99
VPS29Q9UBQ0 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
VPS29Q9UBQ0 AC092435.3-201ENST00000565538 3654 ntBASIC2.64□□□□□ -1.99
VPS29Q9UBQ0 UBA52P6-201ENST00000399822 382 ntBASIC2.64□□□□□ -1.99
VPS29Q9UBQ0 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.64□□□□□ -1.99
VPS29Q9UBQ0 AL139281.1-201ENST00000422120 335 ntBASIC2.64□□□□□ -1.99
VPS29Q9UBQ0 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.64□□□□□ -1.99
VPS29Q9UBQ0 AL451062.2-201ENST00000427515 271 ntBASIC2.64□□□□□ -1.99
VPS29Q9UBQ0 AL139132.1-201ENST00000431587 344 ntBASIC2.64□□□□□ -1.99
VPS29Q9UBQ0 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
VPS29Q9UBQ0 AL136126.1-201ENST00000473603 402 ntBASIC2.64□□□□□ -1.99
VPS29Q9UBQ0 HMGB1P3-201ENST00000502802 616 ntBASIC2.64□□□□□ -1.99
VPS29Q9UBQ0 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC2.64□□□□□ -1.99
VPS29Q9UBQ0 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.64□□□□□ -1.99
VPS29Q9UBQ0 KLHL2P1-201ENST00000508691 521 ntBASIC2.64□□□□□ -1.99
VPS29Q9UBQ0 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.64□□□□□ -1.99
VPS29Q9UBQ0 AC104986.1-201ENST00000517978 436 ntBASIC2.64□□□□□ -1.99
VPS29Q9UBQ0 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.64□□□□□ -1.99
VPS29Q9UBQ0 SERPINE4P-201ENST00000554978 281 ntBASIC2.64□□□□□ -1.99
VPS29Q9UBQ0 AL355836.1-201ENST00000555951 870 ntBASIC2.64□□□□□ -1.99
VPS29Q9UBQ0 MTCYBP28-201ENST00000566728 1132 ntBASIC2.64□□□□□ -1.99
VPS29Q9UBQ0 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.64□□□□□ -1.99
VPS29Q9UBQ0 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.64□□□□□ -1.99
VPS29Q9UBQ0 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.64□□□□□ -1.99
VPS29Q9UBQ0 CR381653.2-201ENST00000624041 768 ntBASIC2.64□□□□□ -1.99
VPS29Q9UBQ0 LRRC77P-213ENST00000637727 880 ntBASIC2.64□□□□□ -1.99
VPS29Q9UBQ0 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.64□□□□□ -1.99
VPS29Q9UBQ0 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.64□□□□□ -1.99
VPS29Q9UBQ0 ZNF807-201ENST00000328088 1707 ntBASIC2.63□□□□□ -1.99
VPS29Q9UBQ0 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
VPS29Q9UBQ0 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
VPS29Q9UBQ0 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
VPS29Q9UBQ0 RNU6-374P-201ENST00000364146 108 ntBASIC2.63□□□□□ -1.99
VPS29Q9UBQ0 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.63□□□□□ -1.99
VPS29Q9UBQ0 AC073264.1-201ENST00000411508 416 ntBASIC2.63□□□□□ -1.99
VPS29Q9UBQ0 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.63□□□□□ -1.99
VPS29Q9UBQ0 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.63□□□□□ -1.99
VPS29Q9UBQ0 RSL24D1P3-201ENST00000449255 495 ntBASIC2.63□□□□□ -1.99
VPS29Q9UBQ0 S100A11P2-201ENST00000467589 312 ntBASIC2.63□□□□□ -1.99
VPS29Q9UBQ0 AC104472.2-201ENST00000469035 601 ntBASIC2.63□□□□□ -1.99
VPS29Q9UBQ0 RN7SL297P-201ENST00000483161 293 ntBASIC2.63□□□□□ -1.99
VPS29Q9UBQ0 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC2.63□□□□□ -1.99
VPS29Q9UBQ0 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.63□□□□□ -1.99
VPS29Q9UBQ0 AC004062.1-201ENST00000509926 645 ntBASIC2.63□□□□□ -1.99
VPS29Q9UBQ0 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
VPS29Q9UBQ0 SNORA74D-201ENST00000516404 141 ntBASIC2.63□□□□□ -1.99
VPS29Q9UBQ0 RNU6-56P-201ENST00000516986 93 ntBASIC2.63□□□□□ -1.99
VPS29Q9UBQ0 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.63□□□□□ -1.99
VPS29Q9UBQ0 AC010306.1-201ENST00000523223 1117 ntBASIC2.63□□□□□ -1.99
VPS29Q9UBQ0 CIR1P1-201ENST00000524055 1133 ntBASIC2.63□□□□□ -1.99
VPS29Q9UBQ0 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.63□□□□□ -1.99
VPS29Q9UBQ0 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.63□□□□□ -1.99
VPS29Q9UBQ0 MIR4504-201ENST00000577413 92 ntBASIC2.63□□□□□ -1.99
VPS29Q9UBQ0 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.63□□□□□ -1.99
VPS29Q9UBQ0 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC2.63□□□□□ -1.99
VPS29Q9UBQ0 FRG1DP-201ENST00000635586 771 ntBASIC2.63□□□□□ -1.99
VPS29Q9UBQ0 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
VPS29Q9UBQ0 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
VPS29Q9UBQ0 AL645568.2-201ENST00000432815 1337 ntBASIC2.63□□□□□ -1.99
VPS29Q9UBQ0 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
VPS29Q9UBQ0 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 RNU6-263P-201ENST00000363811 107 ntBASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 SFR1P1-201ENST00000403720 688 ntBASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 MTATP6P4-201ENST00000427725 675 ntBASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 YWHAZP8-201ENST00000436935 731 ntBASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 GSTA11P-201ENST00000452866 669 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms