Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CNTN3Q9P232 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CNTN3Q9P232 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.75□□□□□ -1.49
CNTN3Q9P232 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC5.75□□□□□ -1.49
CNTN3Q9P232 MIR3942-201ENST00000585264 109 ntBASIC5.75□□□□□ -1.49
CNTN3Q9P232 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.75□□□□□ -1.49
CNTN3Q9P232 AC211433.2-201ENST00000608433 387 ntBASIC5.75□□□□□ -1.49
CNTN3Q9P232 AC092807.2-201ENST00000609367 243 ntBASIC5.75□□□□□ -1.49
CNTN3Q9P232 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CNTN3Q9P232 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CNTN3Q9P232 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.75□□□□□ -1.49
CNTN3Q9P232 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CNTN3Q9P232 AC091046.3-201ENST00000631455 1574 ntBASIC5.75□□□□□ -1.49
CNTN3Q9P232 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.75□□□□□ -1.49
CNTN3Q9P232 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC5.75□□□□□ -1.49
CNTN3Q9P232 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
CNTN3Q9P232 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.74□□□□□ -1.49
CNTN3Q9P232 AL122126.1-201ENST00000546905 1318 ntBASIC5.74□□□□□ -1.49
CNTN3Q9P232 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CNTN3Q9P232 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
CNTN3Q9P232 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CNTN3Q9P232 MTND5P10-201ENST00000603719 1809 ntBASIC5.74□□□□□ -1.49
CNTN3Q9P232 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
CNTN3Q9P232 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CNTN3Q9P232 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
CNTN3Q9P232 SNORA17.1-201ENST00000362945 126 ntBASIC5.74□□□□□ -1.49
CNTN3Q9P232 RNU6-82P-201ENST00000363970 107 ntBASIC5.74□□□□□ -1.49
CNTN3Q9P232 MIR105-1-201ENST00000385222 81 ntBASIC5.74□□□□□ -1.49
CNTN3Q9P232 HSPA8P15-201ENST00000401676 786 ntBASIC5.74□□□□□ -1.49
CNTN3Q9P232 RNU6-370P-201ENST00000411008 104 ntBASIC5.74□□□□□ -1.49
CNTN3Q9P232 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.74□□□□□ -1.49
CNTN3Q9P232 GPS2P1-201ENST00000411761 986 ntBASIC5.74□□□□□ -1.49
CNTN3Q9P232 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC5.74□□□□□ -1.49
CNTN3Q9P232 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.74□□□□□ -1.49
CNTN3Q9P232 AL137792.2-201ENST00000443484 235 ntBASIC5.74□□□□□ -1.49
CNTN3Q9P232 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC5.74□□□□□ -1.49
CNTN3Q9P232 ARL2BPP10-201ENST00000446487 531 ntBASIC5.74□□□□□ -1.49
CNTN3Q9P232 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC5.74□□□□□ -1.49
CNTN3Q9P232 snoU13.7-201ENST00000459220 104 ntBASIC5.74□□□□□ -1.49
CNTN3Q9P232 TRBVA-201ENST00000498804 316 ntBASIC5.74□□□□□ -1.49
CNTN3Q9P232 RNU6-566P-201ENST00000516790 107 ntBASIC5.74□□□□□ -1.49
CNTN3Q9P232 MYL12AP1-201ENST00000518490 515 ntBASIC5.74□□□□□ -1.49
CNTN3Q9P232 AP000857.1-201ENST00000532151 543 ntBASIC5.74□□□□□ -1.49
CNTN3Q9P232 AC024940.3-201ENST00000538551 316 ntBASIC5.74□□□□□ -1.49
CNTN3Q9P232 AC063949.1-201ENST00000552900 865 ntBASIC5.74□□□□□ -1.49
CNTN3Q9P232 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC5.74□□□□□ -1.49
CNTN3Q9P232 CTHRC1P1-201ENST00000605383 469 ntBASIC5.74□□□□□ -1.49
CNTN3Q9P232 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.74□□□□□ -1.49
CNTN3Q9P232 AL121612.2-201ENST00000612261 482 ntBASIC5.74□□□□□ -1.49
CNTN3Q9P232 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC5.74□□□□□ -1.49
CNTN3Q9P232 AC244517.12-201ENST00000623581 663 ntBASIC5.74□□□□□ -1.49
CNTN3Q9P232 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC5.74□□□□□ -1.49
CNTN3Q9P232 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
CNTN3Q9P232 AC007823.1-201ENST00000569932 1566 ntBASIC5.74□□□□□ -1.49
CNTN3Q9P232 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CNTN3Q9P232 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CNTN3Q9P232 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CNTN3Q9P232 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CNTN3Q9P232 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
CNTN3Q9P232 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CNTN3Q9P232 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CNTN3Q9P232 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CNTN3Q9P232 AC244517.1-201ENST00000606030 2086 ntBASIC5.73□□□□□ -1.49
CNTN3Q9P232 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CNTN3Q9P232 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.73□□□□□ -1.49
CNTN3Q9P232 RPL23P2-201ENST00000320371 421 ntBASIC5.73□□□□□ -1.49
CNTN3Q9P232 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.73□□□□□ -1.49
CNTN3Q9P232 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC5.73□□□□□ -1.49
CNTN3Q9P232 Y_RNA.31-201ENST00000362574 102 ntBASIC5.73□□□□□ -1.49
CNTN3Q9P232 Y_RNA.112-201ENST00000363250 102 ntBASIC5.73□□□□□ -1.49
CNTN3Q9P232 RNU6-1309P-201ENST00000363305 108 ntBASIC5.73□□□□□ -1.49
CNTN3Q9P232 RNU6-179P-201ENST00000363350 107 ntBASIC5.73□□□□□ -1.49
CNTN3Q9P232 Y_RNA.212-201ENST00000364177 102 ntBASIC5.73□□□□□ -1.49
CNTN3Q9P232 AC079809.1-201ENST00000415468 276 ntBASIC5.73□□□□□ -1.49
CNTN3Q9P232 AL139396.1-201ENST00000421137 167 ntBASIC5.73□□□□□ -1.49
CNTN3Q9P232 VTI1BP4-201ENST00000427516 527 ntBASIC5.73□□□□□ -1.49
CNTN3Q9P232 RPL7L1P10-201ENST00000427790 463 ntBASIC5.73□□□□□ -1.49
CNTN3Q9P232 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC5.73□□□□□ -1.49
CNTN3Q9P232 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.73□□□□□ -1.49
CNTN3Q9P232 SNRPEP4-201ENST00000435815 279 ntBASIC5.73□□□□□ -1.49
CNTN3Q9P232 AF228730.2-201ENST00000438784 848 ntBASIC5.73□□□□□ -1.49
CNTN3Q9P232 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC5.73□□□□□ -1.49
CNTN3Q9P232 RPL32P28-201ENST00000443577 397 ntBASIC5.73□□□□□ -1.49
CNTN3Q9P232 RPL23AP43-201ENST00000446445 471 ntBASIC5.73□□□□□ -1.49
CNTN3Q9P232 BX284632.1-201ENST00000478218 541 ntBASIC5.73□□□□□ -1.49
CNTN3Q9P232 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC5.73□□□□□ -1.49
CNTN3Q9P232 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
CNTN3Q9P232 AC098591.2-201ENST00000510152 315 ntBASIC5.73□□□□□ -1.49
CNTN3Q9P232 LIAS-206ENST00000513731 826 ntTSL 5 BASIC5.73□□□□□ -1.49
CNTN3Q9P232 RNU6-1088P-201ENST00000516850 104 ntBASIC5.73□□□□□ -1.49
CNTN3Q9P232 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC5.73□□□□□ -1.49
CNTN3Q9P232 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.73□□□□□ -1.49
CNTN3Q9P232 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.73□□□□□ -1.49
CNTN3Q9P232 AC004817.2-201ENST00000561794 651 ntBASIC5.73□□□□□ -1.49
CNTN3Q9P232 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.73□□□□□ -1.49
CNTN3Q9P232 BNIP3P25-201ENST00000596023 559 ntBASIC5.73□□□□□ -1.49
CNTN3Q9P232 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.73□□□□□ -1.49
CNTN3Q9P232 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.73□□□□□ -1.49
CNTN3Q9P232 AC133644.2-201ENST00000608142 540 ntBASIC5.73□□□□□ -1.49
CNTN3Q9P232 AL713922.2-201ENST00000619384 716 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms