Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.59□□□□□ -1.67
COL20A1Q9P218 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.59□□□□□ -1.67
COL20A1Q9P218 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.59□□□□□ -1.68
COL20A1Q9P218 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.59□□□□□ -1.68
COL20A1Q9P218 AC010300.1-201ENST00000600671 5134 ntBASIC4.59□□□□□ -1.68
COL20A1Q9P218 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL20A1Q9P218 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.58□□□□□ -1.68
COL20A1Q9P218 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
COL20A1Q9P218 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL20A1Q9P218 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.58□□□□□ -1.68
COL20A1Q9P218 RNU6-28P-201ENST00000362378 107 ntBASIC4.58□□□□□ -1.68
COL20A1Q9P218 RNY4P24-201ENST00000362735 96 ntBASIC4.58□□□□□ -1.68
COL20A1Q9P218 SNORD35B-201ENST00000363660 87 ntBASIC4.58□□□□□ -1.68
COL20A1Q9P218 RNU6-777P-201ENST00000364265 104 ntBASIC4.58□□□□□ -1.68
COL20A1Q9P218 SNORA48.7-201ENST00000391302 135 ntBASIC4.58□□□□□ -1.68
COL20A1Q9P218 RN7SKP202-201ENST00000410439 330 ntBASIC4.58□□□□□ -1.68
COL20A1Q9P218 RN7SKP159-201ENST00000410657 292 ntBASIC4.58□□□□□ -1.68
COL20A1Q9P218 AL663109.1-201ENST00000411498 844 ntBASIC4.58□□□□□ -1.68
COL20A1Q9P218 MTCO1P17-201ENST00000411522 491 ntBASIC4.58□□□□□ -1.68
COL20A1Q9P218 RPL31P45-201ENST00000419532 356 ntBASIC4.58□□□□□ -1.68
COL20A1Q9P218 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.58□□□□□ -1.68
COL20A1Q9P218 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.58□□□□□ -1.68
COL20A1Q9P218 SKP1P1-201ENST00000438081 489 ntBASIC4.58□□□□□ -1.68
COL20A1Q9P218 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.58□□□□□ -1.68
COL20A1Q9P218 AC127537.2-201ENST00000439258 465 ntBASIC4.58□□□□□ -1.68
COL20A1Q9P218 AL592447.1-201ENST00000447592 540 ntBASIC4.58□□□□□ -1.68
COL20A1Q9P218 SSXP1-201ENST00000453640 473 ntBASIC4.58□□□□□ -1.68
COL20A1Q9P218 HMGB1P15-201ENST00000453854 435 ntBASIC4.58□□□□□ -1.68
COL20A1Q9P218 AC005798.1-201ENST00000513715 387 ntBASIC4.58□□□□□ -1.68
COL20A1Q9P218 AC034159.1-201ENST00000513885 583 ntBASIC4.58□□□□□ -1.68
COL20A1Q9P218 RNU1-45P-201ENST00000517191 141 ntBASIC4.58□□□□□ -1.68
COL20A1Q9P218 IGHV3-32-201ENST00000519182 355 ntBASIC4.58□□□□□ -1.68
COL20A1Q9P218 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.58□□□□□ -1.68
COL20A1Q9P218 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.58□□□□□ -1.68
COL20A1Q9P218 AP002963.1-201ENST00000530590 184 ntBASIC4.58□□□□□ -1.68
COL20A1Q9P218 AL139174.1-201ENST00000531489 886 ntBASIC4.58□□□□□ -1.68
COL20A1Q9P218 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.58□□□□□ -1.68
COL20A1Q9P218 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.58□□□□□ -1.68
COL20A1Q9P218 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.58□□□□□ -1.68
COL20A1Q9P218 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC4.58□□□□□ -1.68
COL20A1Q9P218 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.58□□□□□ -1.68
COL20A1Q9P218 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.58□□□□□ -1.68
COL20A1Q9P218 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.58□□□□□ -1.68
COL20A1Q9P218 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.58□□□□□ -1.68
COL20A1Q9P218 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.58□□□□□ -1.68
COL20A1Q9P218 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.58□□□□□ -1.68
COL20A1Q9P218 AL592436.1-201ENST00000605135 558 ntBASIC4.58□□□□□ -1.68
COL20A1Q9P218 AP003117.2-201ENST00000606010 545 ntBASIC4.58□□□□□ -1.68
COL20A1Q9P218 AC104073.3-201ENST00000610942 955 ntBASIC4.58□□□□□ -1.68
COL20A1Q9P218 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
COL20A1Q9P218 AL392088.2-201ENST00000637607 285 ntBASIC4.58□□□□□ -1.68
COL20A1Q9P218 AC006378.2-201ENST00000623178 2476 ntBASIC4.58□□□□□ -1.68
COL20A1Q9P218 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COL20A1Q9P218 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
COL20A1Q9P218 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
COL20A1Q9P218 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL20A1Q9P218 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL20A1Q9P218 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL20A1Q9P218 AC092435.4-201ENST00000623012 4159 ntBASIC4.57□□□□□ -1.68
COL20A1Q9P218 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.57□□□□□ -1.68
COL20A1Q9P218 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL20A1Q9P218 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COL20A1Q9P218 DCAF13P1-201ENST00000495256 1330 ntBASIC4.57□□□□□ -1.68
COL20A1Q9P218 AL161781.1-201ENST00000354277 403 ntBASIC4.57□□□□□ -1.68
COL20A1Q9P218 RNA5SP399-201ENST00000364003 117 ntBASIC4.57□□□□□ -1.68
COL20A1Q9P218 OR5H15-201ENST00000383696 930 ntBASIC4.57□□□□□ -1.68
COL20A1Q9P218 MTND4LP20-201ENST00000402379 270 ntBASIC4.57□□□□□ -1.68
COL20A1Q9P218 MTCYBP36-201ENST00000404146 440 ntBASIC4.57□□□□□ -1.68
COL20A1Q9P218 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.57□□□□□ -1.68
COL20A1Q9P218 RPL21P32-201ENST00000419877 477 ntBASIC4.57□□□□□ -1.68
COL20A1Q9P218 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.57□□□□□ -1.68
COL20A1Q9P218 PSMA6P3-201ENST00000428242 164 ntBASIC4.57□□□□□ -1.68
COL20A1Q9P218 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COL20A1Q9P218 AL589823.1-201ENST00000429577 183 ntBASIC4.57□□□□□ -1.68
COL20A1Q9P218 AL590233.1-201ENST00000430017 456 ntBASIC4.57□□□□□ -1.68
COL20A1Q9P218 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.57□□□□□ -1.68
COL20A1Q9P218 SDCBPP1-201ENST00000440192 890 ntBASIC4.57□□□□□ -1.68
COL20A1Q9P218 OR6K1P-201ENST00000456766 971 ntBASIC4.57□□□□□ -1.68
COL20A1Q9P218 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.57□□□□□ -1.68
COL20A1Q9P218 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.57□□□□□ -1.68
COL20A1Q9P218 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.57□□□□□ -1.68
COL20A1Q9P218 OR5H5P-201ENST00000503164 928 ntBASIC4.57□□□□□ -1.68
COL20A1Q9P218 PRELID3BP7-201ENST00000503606 469 ntBASIC4.57□□□□□ -1.68
COL20A1Q9P218 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.57□□□□□ -1.68
COL20A1Q9P218 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.57□□□□□ -1.68
COL20A1Q9P218 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.57□□□□□ -1.68
COL20A1Q9P218 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.57□□□□□ -1.68
COL20A1Q9P218 TXNP6-201ENST00000510190 310 ntBASIC4.57□□□□□ -1.68
COL20A1Q9P218 AC021146.3-201ENST00000511911 260 ntBASIC4.57□□□□□ -1.68
COL20A1Q9P218 SNORA67.7-201ENST00000516664 135 ntBASIC4.57□□□□□ -1.68
COL20A1Q9P218 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.57□□□□□ -1.68
COL20A1Q9P218 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.57□□□□□ -1.68
COL20A1Q9P218 OR8L1P-201ENST00000534005 955 ntBASIC4.57□□□□□ -1.68
COL20A1Q9P218 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.57□□□□□ -1.68
COL20A1Q9P218 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.57□□□□□ -1.68
COL20A1Q9P218 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.57□□□□□ -1.68
COL20A1Q9P218 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.57□□□□□ -1.68
COL20A1Q9P218 AC233280.2-201ENST00000603917 1070 ntBASIC4.57□□□□□ -1.68
COL20A1Q9P218 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL20A1Q9P218 MIR432-201ENST00000606207 94 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms