Protein–RNA interactions for Protein: Q9NVP1

DDX18, ATP-dependent RNA helicase DDX18, humanhuman

Known RBP Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX18Q9NVP1 HMGB3P11-201ENST00000440127 604 ntBASIC3.18□□□□□ -1.9
DDX18Q9NVP1 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.18□□□□□ -1.9
DDX18Q9NVP1 RBMY2UP-201ENST00000453474 324 ntBASIC3.18□□□□□ -1.9
DDX18Q9NVP1 MTND3P4-201ENST00000453537 303 ntBASIC3.18□□□□□ -1.9
DDX18Q9NVP1 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.18□□□□□ -1.9
DDX18Q9NVP1 AC091564.1-201ENST00000464563 479 ntBASIC3.18□□□□□ -1.9
DDX18Q9NVP1 FAM133DP-201ENST00000464802 691 ntBASIC3.18□□□□□ -1.9
DDX18Q9NVP1 RN7SL601P-201ENST00000471221 293 ntBASIC3.18□□□□□ -1.9
DDX18Q9NVP1 AC112198.1-201ENST00000505369 1220 ntBASIC3.18□□□□□ -1.9
DDX18Q9NVP1 ARL4AP2-201ENST00000507378 601 ntBASIC3.18□□□□□ -1.9
DDX18Q9NVP1 HMGN1P15-201ENST00000513870 295 ntBASIC3.18□□□□□ -1.9
DDX18Q9NVP1 RNU1-143P-201ENST00000516296 146 ntBASIC3.18□□□□□ -1.9
DDX18Q9NVP1 EEF1B2P4-201ENST00000551398 348 ntBASIC3.18□□□□□ -1.9
DDX18Q9NVP1 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.18□□□□□ -1.9
DDX18Q9NVP1 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.18□□□□□ -1.9
DDX18Q9NVP1 AC010653.1-201ENST00000571108 881 ntBASIC3.18□□□□□ -1.9
DDX18Q9NVP1 AC067852.3-201ENST00000589177 561 ntBASIC3.18□□□□□ -1.9
DDX18Q9NVP1 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.18□□□□□ -1.9
DDX18Q9NVP1 GLUD1P4-201ENST00000590914 418 ntBASIC3.18□□□□□ -1.9
DDX18Q9NVP1 RPL23AP78-201ENST00000599928 470 ntBASIC3.18□□□□□ -1.9
DDX18Q9NVP1 AC010738.1-201ENST00000604970 987 ntBASIC3.18□□□□□ -1.9
DDX18Q9NVP1 U1.23-201ENST00000610293 146 ntBASIC3.18□□□□□ -1.9
DDX18Q9NVP1 MIR6798-201ENST00000612887 67 ntBASIC3.18□□□□□ -1.9
DDX18Q9NVP1 RNU1-68P-201ENST00000615382 146 ntBASIC3.18□□□□□ -1.9
DDX18Q9NVP1 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.18□□□□□ -1.9
DDX18Q9NVP1 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.18□□□□□ -1.9
DDX18Q9NVP1 U1.39-201ENST00000621562 146 ntBASIC3.18□□□□□ -1.9
DDX18Q9NVP1 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.18□□□□□ -1.9
DDX18Q9NVP1 AL392088.2-201ENST00000637607 285 ntBASIC3.18□□□□□ -1.9
DDX18Q9NVP1 AC011460.1-201ENST00000636268 1834 ntBASIC3.18□□□□□ -1.9
DDX18Q9NVP1 AL513185.3-201ENST00000433335 1300 ntBASIC3.18□□□□□ -1.9
DDX18Q9NVP1 MTND5P19-201ENST00000424872 1794 ntBASIC3.17□□□□□ -1.9
DDX18Q9NVP1 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
DDX18Q9NVP1 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
DDX18Q9NVP1 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.17□□□□□ -1.9
DDX18Q9NVP1 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.17□□□□□ -1.9
DDX18Q9NVP1 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
DDX18Q9NVP1 RNA5SP197-201ENST00000363357 119 ntBASIC3.17□□□□□ -1.9
DDX18Q9NVP1 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
DDX18Q9NVP1 MIR200C-201ENST00000384980 68 ntBASIC3.17□□□□□ -1.9
DDX18Q9NVP1 SNORD17-201ENST00000390930 237 ntBASIC3.17□□□□□ -1.9
DDX18Q9NVP1 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.17□□□□□ -1.9
DDX18Q9NVP1 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
DDX18Q9NVP1 AL031121.1-201ENST00000406553 254 ntBASIC3.17□□□□□ -1.9
DDX18Q9NVP1 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.17□□□□□ -1.9
DDX18Q9NVP1 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.17□□□□□ -1.9
DDX18Q9NVP1 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.17□□□□□ -1.9
DDX18Q9NVP1 MTND4LP7-201ENST00000431728 294 ntBASIC3.17□□□□□ -1.9
DDX18Q9NVP1 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.17□□□□□ -1.9
DDX18Q9NVP1 RNU6-775P-201ENST00000459318 96 ntBASIC3.17□□□□□ -1.9
DDX18Q9NVP1 SETP11-201ENST00000473027 690 ntBASIC3.17□□□□□ -1.9
DDX18Q9NVP1 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.17□□□□□ -1.9
DDX18Q9NVP1 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.17□□□□□ -1.9
DDX18Q9NVP1 SAP18P1-201ENST00000512058 390 ntBASIC3.17□□□□□ -1.9
DDX18Q9NVP1 APOOP4-201ENST00000513530 597 ntBASIC3.17□□□□□ -1.9
DDX18Q9NVP1 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.17□□□□□ -1.9
DDX18Q9NVP1 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.17□□□□□ -1.9
DDX18Q9NVP1 HMGB1P1-201ENST00000522557 636 ntBASIC3.17□□□□□ -1.9
DDX18Q9NVP1 ARL2BPP5-201ENST00000523141 481 ntBASIC3.17□□□□□ -1.9
DDX18Q9NVP1 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.17□□□□□ -1.9
DDX18Q9NVP1 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.17□□□□□ -1.9
DDX18Q9NVP1 OR5B10P-201ENST00000532869 642 ntBASIC3.17□□□□□ -1.9
DDX18Q9NVP1 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.17□□□□□ -1.9
DDX18Q9NVP1 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.17□□□□□ -1.9
DDX18Q9NVP1 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
DDX18Q9NVP1 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.17□□□□□ -1.9
DDX18Q9NVP1 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.17□□□□□ -1.9
DDX18Q9NVP1 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.17□□□□□ -1.9
DDX18Q9NVP1 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
DDX18Q9NVP1 MAGOH2P-202ENST00000584384 429 ntBASIC3.17□□□□□ -1.9
DDX18Q9NVP1 AC078899.3-201ENST00000599065 212 ntBASIC3.17□□□□□ -1.9
DDX18Q9NVP1 NUTF2P8-201ENST00000604593 363 ntBASIC3.17□□□□□ -1.9
DDX18Q9NVP1 U3.45-201ENST00000607547 219 ntBASIC3.17□□□□□ -1.9
DDX18Q9NVP1 RMST_10.1-201ENST00000616309 154 ntBASIC3.17□□□□□ -1.9
DDX18Q9NVP1 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.17□□□□□ -1.9
DDX18Q9NVP1 AC040168.1-201ENST00000623594 991 ntBASIC3.17□□□□□ -1.9
DDX18Q9NVP1 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.17□□□□□ -1.9
DDX18Q9NVP1 AC084035.1-201ENST00000634543 607 ntBASIC3.17□□□□□ -1.9
DDX18Q9NVP1 AC244258.1-201ENST00000637553 1071 ntBASIC3.17□□□□□ -1.9
DDX18Q9NVP1 AC132825.7-201ENST00000638744 335 ntBASIC3.17□□□□□ -1.9
DDX18Q9NVP1 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.17□□□□□ -1.9
DDX18Q9NVP1 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
DDX18Q9NVP1 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.17□□□□□ -1.9
DDX18Q9NVP1 MFSD8-213ENST00000641134 1327 ntBASIC3.17□□□□□ -1.9
DDX18Q9NVP1 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
DDX18Q9NVP1 NUP58P1-201ENST00000502546 1738 ntBASIC3.16□□□□□ -1.9
DDX18Q9NVP1 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
DDX18Q9NVP1 U3.6-201ENST00000363622 211 ntBASIC3.16□□□□□ -1.9
DDX18Q9NVP1 SNORD56.4-201ENST00000363883 71 ntBASIC3.16□□□□□ -1.9
DDX18Q9NVP1 SNORA51.4-201ENST00000364993 124 ntBASIC3.16□□□□□ -1.9
DDX18Q9NVP1 RNU6-796P-201ENST00000391086 107 ntBASIC3.16□□□□□ -1.9
DDX18Q9NVP1 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.16□□□□□ -1.9
DDX18Q9NVP1 RPL27AP8-201ENST00000424277 446 ntBASIC3.16□□□□□ -1.9
DDX18Q9NVP1 SAR1AP4-201ENST00000429225 591 ntBASIC3.16□□□□□ -1.9
DDX18Q9NVP1 AC091286.1-201ENST00000431233 461 ntBASIC3.16□□□□□ -1.9
DDX18Q9NVP1 SETP8-201ENST00000435341 628 ntBASIC3.16□□□□□ -1.9
DDX18Q9NVP1 MTCO3P2-201ENST00000457365 171 ntBASIC3.16□□□□□ -1.9
DDX18Q9NVP1 PABPC1P3-201ENST00000469174 459 ntBASIC3.16□□□□□ -1.9
DDX18Q9NVP1 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
DDX18Q9NVP1 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms