Protein–RNA interactions for Protein: Q9NUW8

TDP1, Tyrosyl-DNA phosphodiesterase 1, humanhuman

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1Q9NUW8 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TDP1Q9NUW8 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TDP1Q9NUW8 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.62□□□□□ -1.67
TDP1Q9NUW8 ZNF734P-201ENST00000419494 1534 ntBASIC4.62□□□□□ -1.67
TDP1Q9NUW8 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
TDP1Q9NUW8 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.62□□□□□ -1.67
TDP1Q9NUW8 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
TDP1Q9NUW8 AC017104.4-201ENST00000636283 1592 ntBASIC4.62□□□□□ -1.67
TDP1Q9NUW8 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.62□□□□□ -1.67
TDP1Q9NUW8 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TDP1Q9NUW8 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TDP1Q9NUW8 AC008033.1-201ENST00000216407 1162 ntBASIC4.62□□□□□ -1.67
TDP1Q9NUW8 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
TDP1Q9NUW8 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
TDP1Q9NUW8 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
TDP1Q9NUW8 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.62□□□□□ -1.67
TDP1Q9NUW8 MIR3065-201ENST00000390137 79 ntBASIC4.62□□□□□ -1.67
TDP1Q9NUW8 U3.29-201ENST00000391296 212 ntBASIC4.62□□□□□ -1.67
TDP1Q9NUW8 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.62□□□□□ -1.67
TDP1Q9NUW8 GSTA9P-201ENST00000406231 611 ntBASIC4.62□□□□□ -1.67
TDP1Q9NUW8 RNU2-15P-201ENST00000410692 191 ntBASIC4.62□□□□□ -1.67
TDP1Q9NUW8 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.62□□□□□ -1.67
TDP1Q9NUW8 AL353777.1-201ENST00000425552 326 ntBASIC4.62□□□□□ -1.67
TDP1Q9NUW8 OR2AH1P-201ENST00000425717 928 ntBASIC4.62□□□□□ -1.67
TDP1Q9NUW8 USP9YP18-201ENST00000425912 695 ntBASIC4.62□□□□□ -1.67
TDP1Q9NUW8 AL596276.1-201ENST00000434465 418 ntBASIC4.62□□□□□ -1.67
TDP1Q9NUW8 ARPC3P1-201ENST00000437218 533 ntBASIC4.62□□□□□ -1.67
TDP1Q9NUW8 MTND4P18-201ENST00000447010 465 ntBASIC4.62□□□□□ -1.67
TDP1Q9NUW8 FGF7P6-202ENST00000451282 293 ntBASIC4.62□□□□□ -1.67
TDP1Q9NUW8 AP1S2P1-201ENST00000457344 379 ntBASIC4.62□□□□□ -1.67
TDP1Q9NUW8 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.62□□□□□ -1.67
TDP1Q9NUW8 RPS27AP17-201ENST00000463344 455 ntBASIC4.62□□□□□ -1.67
TDP1Q9NUW8 KCTD9P5-201ENST00000504141 1170 ntBASIC4.62□□□□□ -1.67
TDP1Q9NUW8 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.62□□□□□ -1.67
TDP1Q9NUW8 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.62□□□□□ -1.67
TDP1Q9NUW8 MTCO1P35-201ENST00000515270 228 ntBASIC4.62□□□□□ -1.67
TDP1Q9NUW8 HIGD1AP3-201ENST00000515857 278 ntBASIC4.62□□□□□ -1.67
TDP1Q9NUW8 IGKV2D-36-201ENST00000518643 226 ntBASIC4.62□□□□□ -1.67
TDP1Q9NUW8 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.62□□□□□ -1.67
TDP1Q9NUW8 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.62□□□□□ -1.67
TDP1Q9NUW8 CENPUP2-201ENST00000555897 1186 ntBASIC4.62□□□□□ -1.67
TDP1Q9NUW8 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.62□□□□□ -1.67
TDP1Q9NUW8 NRBF2P1-201ENST00000587407 859 ntBASIC4.62□□□□□ -1.67
TDP1Q9NUW8 AL365503.1-201ENST00000605247 905 ntBASIC4.62□□□□□ -1.67
TDP1Q9NUW8 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.62□□□□□ -1.67
TDP1Q9NUW8 AL592295.2-201ENST00000612578 206 ntBASIC4.62□□□□□ -1.67
TDP1Q9NUW8 MIR3653-201ENST00000625572 110 ntBASIC4.62□□□□□ -1.67
TDP1Q9NUW8 AC010149.2-201ENST00000637608 315 ntBASIC4.62□□□□□ -1.67
TDP1Q9NUW8 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
TDP1Q9NUW8 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TDP1Q9NUW8 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TDP1Q9NUW8 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TDP1Q9NUW8 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.62□□□□□ -1.67
TDP1Q9NUW8 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.62□□□□□ -1.67
TDP1Q9NUW8 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.62□□□□□ -1.67
TDP1Q9NUW8 ELF2P3-201ENST00000445099 1506 ntBASIC4.62□□□□□ -1.67
TDP1Q9NUW8 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
TDP1Q9NUW8 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
TDP1Q9NUW8 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
TDP1Q9NUW8 IQCB2P-201ENST00000401788 1633 ntBASIC4.61□□□□□ -1.67
TDP1Q9NUW8 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TDP1Q9NUW8 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TDP1Q9NUW8 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.61□□□□□ -1.67
TDP1Q9NUW8 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TDP1Q9NUW8 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.61□□□□□ -1.67
TDP1Q9NUW8 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.61□□□□□ -1.67
TDP1Q9NUW8 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.61□□□□□ -1.67
TDP1Q9NUW8 FRG1BP-201ENST00000278882 761 ntBASIC4.61□□□□□ -1.67
TDP1Q9NUW8 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TDP1Q9NUW8 MIR331-201ENST00000362302 94 ntBASIC4.61□□□□□ -1.67
TDP1Q9NUW8 RPS26P8-201ENST00000393490 348 ntBASIC4.61□□□□□ -1.67
TDP1Q9NUW8 BTF3P7-201ENST00000407097 488 ntBASIC4.61□□□□□ -1.67
TDP1Q9NUW8 SNORA11F-201ENST00000408237 128 ntBASIC4.61□□□□□ -1.67
TDP1Q9NUW8 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.61□□□□□ -1.67
TDP1Q9NUW8 RPL17P36-201ENST00000420302 549 ntBASIC4.61□□□□□ -1.67
TDP1Q9NUW8 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TDP1Q9NUW8 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TDP1Q9NUW8 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TDP1Q9NUW8 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.61□□□□□ -1.67
TDP1Q9NUW8 AL451074.3-201ENST00000437709 472 ntBASIC4.61□□□□□ -1.67
TDP1Q9NUW8 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.61□□□□□ -1.67
TDP1Q9NUW8 AC079448.1-201ENST00000449377 373 ntBASIC4.61□□□□□ -1.67
TDP1Q9NUW8 PSPHP1-201ENST00000450062 261 ntBASIC4.61□□□□□ -1.67
TDP1Q9NUW8 MTCO3P20-201ENST00000454926 688 ntBASIC4.61□□□□□ -1.67
TDP1Q9NUW8 RPL7P15-201ENST00000461190 712 ntBASIC4.61□□□□□ -1.67
TDP1Q9NUW8 RPS4XP10-201ENST00000465034 731 ntBASIC4.61□□□□□ -1.67
TDP1Q9NUW8 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.61□□□□□ -1.67
TDP1Q9NUW8 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.61□□□□□ -1.67
TDP1Q9NUW8 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.61□□□□□ -1.67
TDP1Q9NUW8 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.61□□□□□ -1.67
TDP1Q9NUW8 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.61□□□□□ -1.67
TDP1Q9NUW8 AP003730.1-201ENST00000524605 285 ntBASIC4.61□□□□□ -1.67
TDP1Q9NUW8 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TDP1Q9NUW8 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.61□□□□□ -1.67
TDP1Q9NUW8 AC123904.2-201ENST00000548059 300 ntBASIC4.61□□□□□ -1.67
TDP1Q9NUW8 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.61□□□□□ -1.67
TDP1Q9NUW8 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.61□□□□□ -1.67
TDP1Q9NUW8 AC092325.1-201ENST00000566449 554 ntBASIC4.61□□□□□ -1.67
TDP1Q9NUW8 AC079587.1-201ENST00000603846 277 ntBASIC4.61□□□□□ -1.67
TDP1Q9NUW8 AL109618.2-201ENST00000605527 211 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms