Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
ATG3Q9NT62 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
ATG3Q9NT62 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
ATG3Q9NT62 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
ATG3Q9NT62 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.98□□□□□ -1.45
ATG3Q9NT62 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
ATG3Q9NT62 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.98□□□□□ -1.45
ATG3Q9NT62 CDR1-202ENST00000625883 1485 ntBASIC5.98□□□□□ -1.45
ATG3Q9NT62 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.98□□□□□ -1.45
ATG3Q9NT62 AC011155.1-201ENST00000316512 456 ntBASIC5.98□□□□□ -1.45
ATG3Q9NT62 MIR369-201ENST00000362155 70 ntBASIC5.98□□□□□ -1.45
ATG3Q9NT62 Y_RNA.184-201ENST00000363884 108 ntBASIC5.98□□□□□ -1.45
ATG3Q9NT62 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.98□□□□□ -1.45
ATG3Q9NT62 UBBP2-201ENST00000376781 231 ntBASIC5.98□□□□□ -1.45
ATG3Q9NT62 RNU6-784P-201ENST00000384330 106 ntBASIC5.98□□□□□ -1.45
ATG3Q9NT62 Y_RNA.481-201ENST00000384373 102 ntBASIC5.98□□□□□ -1.45
ATG3Q9NT62 RN7SKP32-201ENST00000410167 303 ntBASIC5.98□□□□□ -1.45
ATG3Q9NT62 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.98□□□□□ -1.45
ATG3Q9NT62 AL953862.1-201ENST00000423016 168 ntBASIC5.98□□□□□ -1.45
ATG3Q9NT62 AL513175.1-201ENST00000431492 780 ntBASIC5.98□□□□□ -1.45
ATG3Q9NT62 RPL7P29-201ENST00000437151 728 ntBASIC5.98□□□□□ -1.45
ATG3Q9NT62 CBWD4P-201ENST00000445695 655 ntBASIC5.98□□□□□ -1.45
ATG3Q9NT62 AC005229.2-201ENST00000456995 399 ntBASIC5.98□□□□□ -1.45
ATG3Q9NT62 RPL23AP12-201ENST00000467573 473 ntBASIC5.98□□□□□ -1.45
ATG3Q9NT62 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC5.98□□□□□ -1.45
ATG3Q9NT62 AC093677.1-201ENST00000514414 678 ntBASIC5.98□□□□□ -1.45
ATG3Q9NT62 RNU6-123P-201ENST00000516163 102 ntBASIC5.98□□□□□ -1.45
ATG3Q9NT62 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC5.98□□□□□ -1.45
ATG3Q9NT62 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.98□□□□□ -1.45
ATG3Q9NT62 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.98□□□□□ -1.45
ATG3Q9NT62 AC005868.1-201ENST00000536421 331 ntBASIC5.98□□□□□ -1.45
ATG3Q9NT62 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.98□□□□□ -1.45
ATG3Q9NT62 AC034105.3-201ENST00000565294 442 ntBASIC5.98□□□□□ -1.45
ATG3Q9NT62 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5.98□□□□□ -1.45
ATG3Q9NT62 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC5.98□□□□□ -1.45
ATG3Q9NT62 MIR4307-201ENST00000582802 84 ntBASIC5.98□□□□□ -1.45
ATG3Q9NT62 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
ATG3Q9NT62 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.98□□□□□ -1.45
ATG3Q9NT62 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC5.98□□□□□ -1.45
ATG3Q9NT62 AL023881.1-201ENST00000621088 301 ntBASIC5.98□□□□□ -1.45
ATG3Q9NT62 AL732618.1-201ENST00000623251 301 ntBASIC5.98□□□□□ -1.45
ATG3Q9NT62 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
ATG3Q9NT62 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
ATG3Q9NT62 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.98□□□□□ -1.45
ATG3Q9NT62 AL731532.2-201ENST00000623542 1953 ntBASIC5.98□□□□□ -1.45
ATG3Q9NT62 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
ATG3Q9NT62 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
ATG3Q9NT62 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
ATG3Q9NT62 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
ATG3Q9NT62 AC009313.2-201ENST00000417893 1941 ntBASIC5.97□□□□□ -1.45
ATG3Q9NT62 STX3-208ENST00000641815 3236 ntBASIC5.97□□□□□ -1.45
ATG3Q9NT62 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
ATG3Q9NT62 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.97□□□□□ -1.45
ATG3Q9NT62 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
ATG3Q9NT62 RNU6-1066P-201ENST00000363573 105 ntBASIC5.97□□□□□ -1.45
ATG3Q9NT62 Y_RNA.157-201ENST00000363638 102 ntBASIC5.97□□□□□ -1.45
ATG3Q9NT62 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.97□□□□□ -1.45
ATG3Q9NT62 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
ATG3Q9NT62 RNU6-98P-201ENST00000384173 107 ntBASIC5.97□□□□□ -1.45
ATG3Q9NT62 SNORA70C-201ENST00000384538 135 ntBASIC5.97□□□□□ -1.45
ATG3Q9NT62 RPL32P23-201ENST00000397237 405 ntBASIC5.97□□□□□ -1.45
ATG3Q9NT62 AL356057.3-201ENST00000402607 340 ntBASIC5.97□□□□□ -1.45
ATG3Q9NT62 Y_RNA.605-201ENST00000410577 105 ntBASIC5.97□□□□□ -1.45
ATG3Q9NT62 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC5.97□□□□□ -1.45
ATG3Q9NT62 TMBIM7P-201ENST00000418074 855 ntBASIC5.97□□□□□ -1.45
ATG3Q9NT62 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.97□□□□□ -1.45
ATG3Q9NT62 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC5.97□□□□□ -1.45
ATG3Q9NT62 RPL35AP12-201ENST00000425362 338 ntBASIC5.97□□□□□ -1.45
ATG3Q9NT62 MTCO3P46-201ENST00000425787 232 ntBASIC5.97□□□□□ -1.45
ATG3Q9NT62 USP9YP16-201ENST00000430287 407 ntBASIC5.97□□□□□ -1.45
ATG3Q9NT62 AC109583.1-201ENST00000432156 268 ntBASIC5.97□□□□□ -1.45
ATG3Q9NT62 RPL7P12-201ENST00000446719 750 ntBASIC5.97□□□□□ -1.45
ATG3Q9NT62 AC006480.1-201ENST00000449887 378 ntBASIC5.97□□□□□ -1.45
ATG3Q9NT62 USP9YP23-201ENST00000455085 407 ntBASIC5.97□□□□□ -1.45
ATG3Q9NT62 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.97□□□□□ -1.45
ATG3Q9NT62 AC090142.1-201ENST00000465776 462 ntBASIC5.97□□□□□ -1.45
ATG3Q9NT62 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.97□□□□□ -1.45
ATG3Q9NT62 TAF8-207ENST00000482432 556 ntTSL 2 BASIC5.97□□□□□ -1.45
ATG3Q9NT62 RPS3AP50-201ENST00000487064 803 ntBASIC5.97□□□□□ -1.45
ATG3Q9NT62 AC005912.1-201ENST00000495392 255 ntBASIC5.97□□□□□ -1.45
ATG3Q9NT62 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.97□□□□□ -1.45
ATG3Q9NT62 RNU6-445P-201ENST00000516949 107 ntBASIC5.97□□□□□ -1.45
ATG3Q9NT62 RNU6-835P-201ENST00000516974 104 ntBASIC5.97□□□□□ -1.45
ATG3Q9NT62 Y_RNA.711-201ENST00000516993 102 ntBASIC5.97□□□□□ -1.45
ATG3Q9NT62 RNU6-794P-201ENST00000517261 64 ntBASIC5.97□□□□□ -1.45
ATG3Q9NT62 DEFB131D-201ENST00000526803 184 ntBASIC5.97□□□□□ -1.45
ATG3Q9NT62 AP001189.2-201ENST00000527320 189 ntBASIC5.97□□□□□ -1.45
ATG3Q9NT62 OR5B19P-201ENST00000531766 928 ntBASIC5.97□□□□□ -1.45
ATG3Q9NT62 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.97□□□□□ -1.45
ATG3Q9NT62 CYCSP2-201ENST00000558168 301 ntBASIC5.97□□□□□ -1.45
ATG3Q9NT62 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.97□□□□□ -1.45
ATG3Q9NT62 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5.97□□□□□ -1.45
ATG3Q9NT62 VN1R85P-201ENST00000601587 426 ntBASIC5.97□□□□□ -1.45
ATG3Q9NT62 AC112187.2-201ENST00000604345 283 ntBASIC5.97□□□□□ -1.45
ATG3Q9NT62 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.97□□□□□ -1.45
ATG3Q9NT62 AC097468.3-201ENST00000607956 456 ntBASIC5.97□□□□□ -1.45
ATG3Q9NT62 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.97□□□□□ -1.45
ATG3Q9NT62 NMD3P1-201ENST00000439704 1488 ntBASIC5.96□□□□□ -1.45
ATG3Q9NT62 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
ATG3Q9NT62 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms