Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.28□□□□□ -2.04
CHD8Q9HCK8 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.28□□□□□ -2.04
CHD8Q9HCK8 AL137159.1-201ENST00000452808 512 ntBASIC2.28□□□□□ -2.04
CHD8Q9HCK8 AC108078.3-201ENST00000502633 489 ntBASIC2.28□□□□□ -2.04
CHD8Q9HCK8 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.28□□□□□ -2.04
CHD8Q9HCK8 AC026436.1-201ENST00000510537 270 ntBASIC2.28□□□□□ -2.04
CHD8Q9HCK8 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.28□□□□□ -2.04
CHD8Q9HCK8 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.28□□□□□ -2.04
CHD8Q9HCK8 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC2.28□□□□□ -2.04
CHD8Q9HCK8 HMGB1P50-201ENST00000605814 607 ntBASIC2.28□□□□□ -2.04
CHD8Q9HCK8 AP001521.1-201ENST00000609150 300 ntBASIC2.28□□□□□ -2.04
CHD8Q9HCK8 AC005261.6-201ENST00000623072 1387 ntBASIC2.28□□□□□ -2.04
CHD8Q9HCK8 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.05
CHD8Q9HCK8 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
CHD8Q9HCK8 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
CHD8Q9HCK8 OR2X1P-201ENST00000421144 687 ntBASIC2.27□□□□□ -2.05
CHD8Q9HCK8 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.27□□□□□ -2.05
CHD8Q9HCK8 RPL31P12-201ENST00000422587 358 ntBASIC2.27□□□□□ -2.05
CHD8Q9HCK8 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.27□□□□□ -2.05
CHD8Q9HCK8 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.27□□□□□ -2.05
CHD8Q9HCK8 MIR4635-201ENST00000583759 79 ntBASIC2.27□□□□□ -2.05
CHD8Q9HCK8 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
CHD8Q9HCK8 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC2.27□□□□□ -2.05
CHD8Q9HCK8 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC2.27□□□□□ -2.05
CHD8Q9HCK8 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
CHD8Q9HCK8 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CHD8Q9HCK8 AC004987.3-201ENST00000413879 771 ntBASIC2.27□□□□□ -2.05
CHD8Q9HCK8 AC009237.2-201ENST00000421358 284 ntBASIC2.27□□□□□ -2.05
CHD8Q9HCK8 GLRXP1-201ENST00000423261 334 ntBASIC2.27□□□□□ -2.05
CHD8Q9HCK8 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC2.27□□□□□ -2.05
CHD8Q9HCK8 MTCO3P20-201ENST00000454926 688 ntBASIC2.27□□□□□ -2.05
CHD8Q9HCK8 AC140059.1-201ENST00000489238 361 ntBASIC2.27□□□□□ -2.05
CHD8Q9HCK8 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CHD8Q9HCK8 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.27□□□□□ -2.05
CHD8Q9HCK8 CR381653.2-201ENST00000624041 768 ntBASIC2.27□□□□□ -2.05
CHD8Q9HCK8 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
CHD8Q9HCK8 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CHD8Q9HCK8 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CHD8Q9HCK8 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CHD8Q9HCK8 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CHD8Q9HCK8 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CHD8Q9HCK8 Y_RNA.393-201ENST00000383936 102 ntBASIC2.26□□□□□ -2.05
CHD8Q9HCK8 RNU2-32P-201ENST00000411193 191 ntBASIC2.26□□□□□ -2.05
CHD8Q9HCK8 AC006960.1-201ENST00000419980 153 ntBASIC2.26□□□□□ -2.05
CHD8Q9HCK8 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.26□□□□□ -2.05
CHD8Q9HCK8 ACTR6P1-201ENST00000514311 1104 ntBASIC2.26□□□□□ -2.05
CHD8Q9HCK8 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.26□□□□□ -2.05
CHD8Q9HCK8 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.26□□□□□ -2.05
CHD8Q9HCK8 ARL2BPP2-201ENST00000550907 489 ntBASIC2.26□□□□□ -2.05
CHD8Q9HCK8 SULT1C2P1-202ENST00000562418 459 ntBASIC2.26□□□□□ -2.05
CHD8Q9HCK8 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.26□□□□□ -2.05
CHD8Q9HCK8 AC090115.4-201ENST00000609970 188 ntBASIC2.26□□□□□ -2.05
CHD8Q9HCK8 AC010378.1-201ENST00000619270 362 ntBASIC2.26□□□□□ -2.05
CHD8Q9HCK8 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CHD8Q9HCK8 API5P2-201ENST00000397055 1498 ntBASIC2.26□□□□□ -2.05
CHD8Q9HCK8 AC092435.3-201ENST00000565538 3654 ntBASIC2.26□□□□□ -2.05
CHD8Q9HCK8 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
CHD8Q9HCK8 RNU6-516P-201ENST00000411381 104 ntBASIC2.26□□□□□ -2.05
CHD8Q9HCK8 AC245054.2-201ENST00000415639 319 ntBASIC2.26□□□□□ -2.05
CHD8Q9HCK8 RPL23AP45-201ENST00000476406 468 ntBASIC2.26□□□□□ -2.05
CHD8Q9HCK8 RPL36AP51-201ENST00000487216 318 ntBASIC2.26□□□□□ -2.05
CHD8Q9HCK8 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC2.26□□□□□ -2.05
CHD8Q9HCK8 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.26□□□□□ -2.05
CHD8Q9HCK8 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.26□□□□□ -2.05
CHD8Q9HCK8 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.26□□□□□ -2.05
CHD8Q9HCK8 RPL23AP84-201ENST00000571193 464 ntBASIC2.26□□□□□ -2.05
CHD8Q9HCK8 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
CHD8Q9HCK8 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CHD8Q9HCK8 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CHD8Q9HCK8 TEX21P-201ENST00000447107 1476 ntBASIC2.26□□□□□ -2.05
CHD8Q9HCK8 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC2.26□□□□□ -2.05
CHD8Q9HCK8 AP000526.1-201ENST00000603308 1388 ntBASIC2.25□□□□□ -2.05
CHD8Q9HCK8 Z73417.1-201ENST00000447373 778 ntBASIC2.25□□□□□ -2.05
CHD8Q9HCK8 HMGB1P25-201ENST00000468402 607 ntBASIC2.25□□□□□ -2.05
CHD8Q9HCK8 AC008526.1-201ENST00000509149 338 ntBASIC2.25□□□□□ -2.05
CHD8Q9HCK8 AP002748.2-201ENST00000528671 348 ntBASIC2.25□□□□□ -2.05
CHD8Q9HCK8 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC2.25□□□□□ -2.05
CHD8Q9HCK8 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC2.25□□□□□ -2.05
CHD8Q9HCK8 AL162233.1-201ENST00000620014 944 ntBASIC2.25□□□□□ -2.05
CHD8Q9HCK8 AF127577.6-201ENST00000623352 2191 ntBASIC2.25□□□□□ -2.05
CHD8Q9HCK8 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.25□□□□□ -2.05
CHD8Q9HCK8 ST13P14-201ENST00000474095 734 ntBASIC2.25□□□□□ -2.05
CHD8Q9HCK8 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.25□□□□□ -2.05
CHD8Q9HCK8 HMGB1P1-201ENST00000522557 636 ntBASIC2.25□□□□□ -2.05
CHD8Q9HCK8 AP001804.3-201ENST00000525146 880 ntBASIC2.25□□□□□ -2.05
CHD8Q9HCK8 SNRPGP18-201ENST00000553000 214 ntBASIC2.25□□□□□ -2.05
CHD8Q9HCK8 AL022099.1-201ENST00000604551 712 ntBASIC2.25□□□□□ -2.05
CHD8Q9HCK8 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.25□□□□□ -2.05
CHD8Q9HCK8 MTND5P29-201ENST00000458676 1807 ntBASIC2.25□□□□□ -2.05
CHD8Q9HCK8 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.24□□□□□ -2.05
CHD8Q9HCK8 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
CHD8Q9HCK8 AL356489.2-201ENST00000566968 3528 ntBASIC2.24□□□□□ -2.05
CHD8Q9HCK8 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CHD8Q9HCK8 MIR30E-201ENST00000362104 92 ntBASIC2.24□□□□□ -2.05
CHD8Q9HCK8 AL023284.1-201ENST00000403956 276 ntBASIC2.24□□□□□ -2.05
CHD8Q9HCK8 RPS7P9-201ENST00000414704 586 ntBASIC2.24□□□□□ -2.05
CHD8Q9HCK8 USP9YP20-201ENST00000419224 558 ntBASIC2.24□□□□□ -2.05
CHD8Q9HCK8 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.24□□□□□ -2.05
CHD8Q9HCK8 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.24□□□□□ -2.05
CHD8Q9HCK8 DYNLL1P5-201ENST00000467158 270 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms