Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
RNF41Q9H4P4 AL353743.1-202ENST00000431724 1695 ntBASIC3.59□□□□□ -1.83
RNF41Q9H4P4 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RNF41Q9H4P4 AC073325.2-201ENST00000339545 159 ntBASIC3.59□□□□□ -1.83
RNF41Q9H4P4 U3.6-201ENST00000363622 211 ntBASIC3.59□□□□□ -1.83
RNF41Q9H4P4 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.59□□□□□ -1.83
RNF41Q9H4P4 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.59□□□□□ -1.83
RNF41Q9H4P4 AC009237.2-201ENST00000421358 284 ntBASIC3.59□□□□□ -1.83
RNF41Q9H4P4 OR2AS1P-201ENST00000427827 319 ntBASIC3.59□□□□□ -1.83
RNF41Q9H4P4 AC127537.2-201ENST00000439258 465 ntBASIC3.59□□□□□ -1.83
RNF41Q9H4P4 AC233982.1-201ENST00000451247 436 ntBASIC3.59□□□□□ -1.83
RNF41Q9H4P4 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.59□□□□□ -1.83
RNF41Q9H4P4 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.59□□□□□ -1.83
RNF41Q9H4P4 RN7SL20P-201ENST00000488827 297 ntBASIC3.59□□□□□ -1.83
RNF41Q9H4P4 OR2A20P-203ENST00000498397 1268 ntBASIC3.59□□□□□ -1.83
RNF41Q9H4P4 AC118282.2-201ENST00000508739 374 ntBASIC3.59□□□□□ -1.83
RNF41Q9H4P4 AC008837.1-201ENST00000511513 412 ntBASIC3.59□□□□□ -1.83
RNF41Q9H4P4 RNA5SP341-201ENST00000516261 117 ntBASIC3.59□□□□□ -1.83
RNF41Q9H4P4 SCARNA1-201ENST00000517138 166 ntBASIC3.59□□□□□ -1.83
RNF41Q9H4P4 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.59□□□□□ -1.83
RNF41Q9H4P4 NDUFS5P6-201ENST00000529136 295 ntBASIC3.59□□□□□ -1.83
RNF41Q9H4P4 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.59□□□□□ -1.83
RNF41Q9H4P4 H3F3AP1-201ENST00000559984 334 ntBASIC3.59□□□□□ -1.83
RNF41Q9H4P4 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.59□□□□□ -1.83
RNF41Q9H4P4 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.59□□□□□ -1.83
RNF41Q9H4P4 GTF2IP8-201ENST00000560687 584 ntBASIC3.59□□□□□ -1.83
RNF41Q9H4P4 BPTFP1-201ENST00000579209 492 ntBASIC3.59□□□□□ -1.83
RNF41Q9H4P4 AC022146.1-201ENST00000595307 847 ntBASIC3.59□□□□□ -1.83
RNF41Q9H4P4 AC002487.1-201ENST00000604565 994 ntBASIC3.59□□□□□ -1.83
RNF41Q9H4P4 AL359535.1-201ENST00000612100 1087 ntBASIC3.59□□□□□ -1.83
RNF41Q9H4P4 VN1R74P-201ENST00000613259 503 ntBASIC3.59□□□□□ -1.83
RNF41Q9H4P4 MIR6864-201ENST00000617935 70 ntBASIC3.59□□□□□ -1.83
RNF41Q9H4P4 AC090772.4-201ENST00000623599 362 ntBASIC3.59□□□□□ -1.83
RNF41Q9H4P4 AP003485.1-201ENST00000625093 753 ntBASIC3.59□□□□□ -1.83
RNF41Q9H4P4 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.59□□□□□ -1.83
RNF41Q9H4P4 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.84
RNF41Q9H4P4 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
RNF41Q9H4P4 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
RNF41Q9H4P4 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
RNF41Q9H4P4 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
RNF41Q9H4P4 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
RNF41Q9H4P4 MTCO1P56-201ENST00000401674 224 ntBASIC3.58□□□□□ -1.84
RNF41Q9H4P4 SFR1P1-201ENST00000403720 688 ntBASIC3.58□□□□□ -1.84
RNF41Q9H4P4 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RNF41Q9H4P4 MTCO3P31-201ENST00000405526 789 ntBASIC3.58□□□□□ -1.84
RNF41Q9H4P4 RNA5SP293-201ENST00000410527 113 ntBASIC3.58□□□□□ -1.84
RNF41Q9H4P4 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.58□□□□□ -1.84
RNF41Q9H4P4 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.58□□□□□ -1.84
RNF41Q9H4P4 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.58□□□□□ -1.84
RNF41Q9H4P4 C1DP1-201ENST00000426049 402 ntBASIC3.58□□□□□ -1.84
RNF41Q9H4P4 YWHAZP8-201ENST00000436935 731 ntBASIC3.58□□□□□ -1.84
RNF41Q9H4P4 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.58□□□□□ -1.84
RNF41Q9H4P4 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.58□□□□□ -1.84
RNF41Q9H4P4 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.58□□□□□ -1.84
RNF41Q9H4P4 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.58□□□□□ -1.84
RNF41Q9H4P4 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.58□□□□□ -1.84
RNF41Q9H4P4 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.58□□□□□ -1.84
RNF41Q9H4P4 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.58□□□□□ -1.84
RNF41Q9H4P4 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.58□□□□□ -1.84
RNF41Q9H4P4 AC110792.2-201ENST00000510278 224 ntBASIC3.58□□□□□ -1.84
RNF41Q9H4P4 snoZ278.1-201ENST00000517059 112 ntBASIC3.58□□□□□ -1.84
RNF41Q9H4P4 AC091163.3-201ENST00000518269 1144 ntBASIC3.58□□□□□ -1.84
RNF41Q9H4P4 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.58□□□□□ -1.84
RNF41Q9H4P4 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.58□□□□□ -1.84
RNF41Q9H4P4 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.58□□□□□ -1.84
RNF41Q9H4P4 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
RNF41Q9H4P4 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.58□□□□□ -1.84
RNF41Q9H4P4 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.58□□□□□ -1.84
RNF41Q9H4P4 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.58□□□□□ -1.84
RNF41Q9H4P4 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.58□□□□□ -1.84
RNF41Q9H4P4 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.58□□□□□ -1.84
RNF41Q9H4P4 AC017100.2-201ENST00000584628 355 ntBASIC3.58□□□□□ -1.84
RNF41Q9H4P4 AC090330.1-201ENST00000588646 764 ntBASIC3.58□□□□□ -1.84
RNF41Q9H4P4 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.58□□□□□ -1.84
RNF41Q9H4P4 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.58□□□□□ -1.84
RNF41Q9H4P4 AL162274.2-201ENST00000614406 332 ntBASIC3.58□□□□□ -1.84
RNF41Q9H4P4 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RNF41Q9H4P4 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.58□□□□□ -1.84
RNF41Q9H4P4 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RNF41Q9H4P4 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
RNF41Q9H4P4 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RNF41Q9H4P4 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.58□□□□□ -1.84
RNF41Q9H4P4 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.58□□□□□ -1.84
RNF41Q9H4P4 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.58□□□□□ -1.84
RNF41Q9H4P4 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
RNF41Q9H4P4 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.57□□□□□ -1.84
RNF41Q9H4P4 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.57□□□□□ -1.84
RNF41Q9H4P4 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.57□□□□□ -1.84
RNF41Q9H4P4 MIR124-3-201ENST00000384866 87 ntBASIC3.57□□□□□ -1.84
RNF41Q9H4P4 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
RNF41Q9H4P4 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.57□□□□□ -1.84
RNF41Q9H4P4 BTF3P8-201ENST00000414577 526 ntBASIC3.57□□□□□ -1.84
RNF41Q9H4P4 AL049610.1-201ENST00000423374 372 ntBASIC3.57□□□□□ -1.84
RNF41Q9H4P4 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.57□□□□□ -1.84
RNF41Q9H4P4 XPOTP1-201ENST00000443317 2398 ntBASIC3.57□□□□□ -1.84
RNF41Q9H4P4 RPL23AP15-201ENST00000450202 459 ntBASIC3.57□□□□□ -1.84
RNF41Q9H4P4 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RNF41Q9H4P4 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.57□□□□□ -1.84
RNF41Q9H4P4 snoU109.3-201ENST00000459477 145 ntBASIC3.57□□□□□ -1.84
RNF41Q9H4P4 AC117440.1-201ENST00000474107 571 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms