Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 AC133552.1-201ENST00000569988 4007 ntBASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 TAB3P1-202ENST00000452645 1634 ntBASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 RNU5E-8P-201ENST00000363502 116 ntBASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 SNORA51.6-201ENST00000384151 125 ntBASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 RNU6-903P-201ENST00000391270 109 ntBASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 AL023807.1-201ENST00000407932 359 ntBASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 RNU2-29P-201ENST00000410423 189 ntBASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 RNU2-47P-201ENST00000410649 186 ntBASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 RN7SKP235-201ENST00000410662 305 ntBASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 RPL31P12-201ENST00000422587 358 ntBASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 BRWD1P3-201ENST00000428816 390 ntBASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 FABP7P2-201ENST00000429946 379 ntBASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 FABP5P14-201ENST00000437273 393 ntBASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 HMGB1P15-201ENST00000453854 435 ntBASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 AP000893.1-201ENST00000474462 794 ntBASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 AC010655.3-201ENST00000478818 450 ntBASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 RPL7AP10-201ENST00000481016 791 ntBASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 AL049874.2-201ENST00000492636 288 ntBASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 AC015911.1-201ENST00000495111 156 ntBASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 AC021146.1-201ENST00000511202 716 ntBASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 RN7SKP96-201ENST00000516948 297 ntBASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 IMMP1LP2-201ENST00000552954 492 ntBASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 AC009962.1-201ENST00000567327 3813 ntBASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 AC004696.1-201ENST00000614345 607 ntBASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSBP3Q9BWW4 ZNF807-201ENST00000328088 1707 ntBASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 SCARNA15-201ENST00000607520 4325 ntBASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 AC002525.1-201ENST00000624392 1622 ntBASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 HSPE1P11-201ENST00000339579 310 ntBASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 RPL32P3-201ENST00000359025 275 ntBASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 RNU1-43P-201ENST00000365052 165 ntBASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 SNORA63.7-201ENST00000365579 123 ntBASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 RNU6-729P-201ENST00000384399 107 ntBASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 MIR649-201ENST00000384843 97 ntBASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 AC016769.3-201ENST00000396562 315 ntBASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 DBIP1-201ENST00000401435 260 ntBASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 SPTLC1P2-201ENST00000407089 121 ntBASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 RNU2-22P-201ENST00000411266 212 ntBASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 MCFD2P1-201ENST00000417812 300 ntBASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 RPL36AP36-201ENST00000418616 301 ntBASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 AC096644.2-201ENST00000429278 159 ntBASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 HMGB3P11-201ENST00000440127 604 ntBASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 MTCO3P10-201ENST00000455912 772 ntBASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 RPS29P15-201ENST00000458329 171 ntBASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 MIR2053-201ENST00000459295 91 ntBASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 RNU7-66P-201ENST00000459469 62 ntBASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 RPL35AP28-201ENST00000459730 331 ntBASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 AL049714.1-201ENST00000466686 347 ntBASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 RN7SL222P-201ENST00000476452 299 ntBASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 RPS18P6-201ENST00000476880 458 ntBASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 AC055855.1-201ENST00000489563 579 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms