Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 AL157700.1-201ENST00000561973 1432 ntBASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 AC139713.2-214ENST00000642059 1811 ntBASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 DEFB108F-201ENST00000344638 222 ntBASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 RN7SKP145-201ENST00000363291 303 ntBASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 Y_RNA.157-201ENST00000363638 102 ntBASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 RNU6-1029P-201ENST00000384109 107 ntBASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 SNORA16A-201ENST00000384342 137 ntBASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 RPL12P9-201ENST00000412942 488 ntBASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 OR6C66P-201ENST00000414917 930 ntBASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 RPL21P111-201ENST00000418453 477 ntBASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 AC098614.3-201ENST00000438957 440 ntBASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 RPS24P6-201ENST00000452670 400 ntBASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 AZGP1P2-201ENST00000454506 345 ntBASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 AL389915.2-201ENST00000454576 441 ntBASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 RPS20P20-201ENST00000460498 340 ntBASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 RPS29P25-201ENST00000481709 171 ntBASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 AC106872.2-201ENST00000494303 480 ntBASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 AC098799.2-201ENST00000509466 868 ntBASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 SCARNA16.4-201ENST00000516956 187 ntBASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 RANP3-201ENST00000530970 276 ntBASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 AC122688.1-201ENST00000541494 223 ntBASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 FKBP1BP1-201ENST00000553366 325 ntBASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 AC068831.4-201ENST00000556118 109 ntBASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 AC022306.2-201ENST00000617563 647 ntBASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 API5P2-201ENST00000397055 1498 ntBASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 MTND4P12-201ENST00000498999 1377 ntBASIC5.93□□□□□ -1.46
TRAIPQ9BWF2 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 RNU6-946P-201ENST00000383878 107 ntBASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 SNORA24.1-201ENST00000384401 135 ntBASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 AL136116.1-201ENST00000403591 381 ntBASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 RAP1BP3-201ENST00000407180 549 ntBASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 RN7SKP114-201ENST00000410327 279 ntBASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 AC114491.1-201ENST00000416095 246 ntBASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 AC093106.2-201ENST00000428212 385 ntBASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 RPL34P6-201ENST00000432390 345 ntBASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 NEFMP1-201ENST00000443423 1006 ntBASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 AC090804.1-201ENST00000448870 490 ntBASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 AC073415.1-201ENST00000449240 153 ntBASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 RPL37P6-201ENST00000460682 294 ntBASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 AC110792.1-201ENST00000491826 472 ntBASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 RPL38P4-201ENST00000502376 214 ntBASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 RNU4-29P-201ENST00000515943 174 ntBASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 RNU6-352P-201ENST00000516908 107 ntBASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 RNU6-1073P-201ENST00000517182 106 ntBASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 SNORA31.22-201ENST00000517204 135 ntBASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 CENPUP1-201ENST00000526649 1202 ntBASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 AC021006.3-201ENST00000530771 192 ntBASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 AC069307.1-201ENST00000602820 447 ntBASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 AC008945.2-201ENST00000606056 604 ntBASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 RPSAP73-201ENST00000614820 330 ntBASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 AC011755.1-201ENST00000623763 2049 ntBASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 AL022311.1-201ENST00000623726 19416 ntBASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 NOL8P1-201ENST00000508336 3529 ntBASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TRAIPQ9BWF2 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms