Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 RPL7P60-201ENST00000397636 735 ntBASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 DSTNP4-201ENST00000399472 474 ntBASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 FCF1P2-201ENST00000415284 583 ntBASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 LUZP4P1-201ENST00000415420 344 ntBASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 RPP40P1-201ENST00000426762 456 ntBASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 RPS6P15-201ENST00000431996 751 ntBASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 RPL7P34-201ENST00000433316 712 ntBASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 AC108860.1-201ENST00000484521 383 ntBASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 AC108078.3-201ENST00000502633 489 ntBASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 AC079395.1-201ENST00000510981 262 ntBASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 AC005351.1-201ENST00000511152 786 ntBASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 AC109445.1-201ENST00000512356 383 ntBASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 RPL12P22-201ENST00000519073 490 ntBASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 AC027309.2-201ENST00000520566 192 ntBASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 AL132657.2-201ENST00000564417 358 ntBASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 AC145350.1-201ENST00000567426 208 ntBASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 AC087499.8-201ENST00000578406 226 ntBASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 OR4K7P-201ENST00000580232 945 ntBASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 MIR6716-201ENST00000613413 80 ntBASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 AC121761.2-201ENST00000617300 689 ntBASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 AP000484.1-201ENST00000620067 1252 ntBASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 AP003485.2-201ENST00000623636 610 ntBASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 AC109315.1-201ENST00000584143 1347 ntBASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 AC017071.1-201ENST00000564407 2204 ntBASIC3.39□□□□□ -1.87
CCDC28BQ9BUN5 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 AC104454.1-201ENST00000421341 1401 ntBASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 SAGE4P-201ENST00000442271 3381 ntBASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 OR4A15-201ENST00000314706 1035 ntBASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 RNU1-32P-201ENST00000363937 159 ntBASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 RNU6-621P-201ENST00000364752 109 ntBASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 RNU5A-2P-201ENST00000384337 116 ntBASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 SNORA70C-201ENST00000384538 135 ntBASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 MIR30B-201ENST00000384850 88 ntBASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 TAF9BP1-201ENST00000396646 746 ntBASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 RNA5SP317-201ENST00000410176 116 ntBASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 RNA5SP311-201ENST00000411290 116 ntBASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 AL161449.1-201ENST00000414531 1199 ntBASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 UBE2V1P1-201ENST00000430836 445 ntBASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 MTND1P32-201ENST00000433043 938 ntBASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 FGF7P5-201ENST00000441829 291 ntBASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 NPM1P49-201ENST00000448027 714 ntBASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 AC116353.3-201ENST00000511215 249 ntBASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 RNA5SP315-201ENST00000516340 116 ntBASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 RN7SKP31-201ENST00000516354 278 ntBASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 RN7SKP21-201ENST00000516503 220 ntBASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 RNA5SP312-201ENST00000517068 116 ntBASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 EIF5A2P1-201ENST00000564027 460 ntBASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 AC010928.3-201ENST00000587712 541 ntBASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC28BQ9BUN5 DUXAP3-201ENST00000603616 594 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms