Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.09□□□□□ -1.92
EBF4Q9BQW3 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.08□□□□□ -1.92
EBF4Q9BQW3 AL445189.1-201ENST00000405722 338 ntBASIC3.08□□□□□ -1.92
EBF4Q9BQW3 AL136133.1-201ENST00000413694 376 ntBASIC3.08□□□□□ -1.92
EBF4Q9BQW3 SYF2P2-201ENST00000417620 583 ntBASIC3.08□□□□□ -1.92
EBF4Q9BQW3 RPL31P45-201ENST00000419532 356 ntBASIC3.08□□□□□ -1.92
EBF4Q9BQW3 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
EBF4Q9BQW3 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.08□□□□□ -1.92
EBF4Q9BQW3 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
EBF4Q9BQW3 TRIAP1P1-201ENST00000427062 225 ntBASIC3.08□□□□□ -1.92
EBF4Q9BQW3 RPL23AP69-201ENST00000431134 458 ntBASIC3.08□□□□□ -1.92
EBF4Q9BQW3 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.08□□□□□ -1.92
EBF4Q9BQW3 MTCO1P53-201ENST00000441633 699 ntBASIC3.08□□□□□ -1.92
EBF4Q9BQW3 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.08□□□□□ -1.92
EBF4Q9BQW3 RPL26P28-201ENST00000451325 435 ntBASIC3.08□□□□□ -1.92
EBF4Q9BQW3 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.08□□□□□ -1.92
EBF4Q9BQW3 AC068587.2-201ENST00000478386 781 ntBASIC3.08□□□□□ -1.92
EBF4Q9BQW3 RPL21P103-201ENST00000479921 488 ntBASIC3.08□□□□□ -1.92
EBF4Q9BQW3 MTCYBP35-201ENST00000503630 1137 ntBASIC3.08□□□□□ -1.92
EBF4Q9BQW3 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.08□□□□□ -1.92
EBF4Q9BQW3 AC021678.1-201ENST00000505195 936 ntBASIC3.08□□□□□ -1.92
EBF4Q9BQW3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
EBF4Q9BQW3 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.08□□□□□ -1.92
EBF4Q9BQW3 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.08□□□□□ -1.92
EBF4Q9BQW3 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.08□□□□□ -1.92
EBF4Q9BQW3 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.08□□□□□ -1.92
EBF4Q9BQW3 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.08□□□□□ -1.92
EBF4Q9BQW3 MTND3P12-201ENST00000559068 328 ntBASIC3.08□□□□□ -1.92
EBF4Q9BQW3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.08□□□□□ -1.92
EBF4Q9BQW3 AC009712.1-201ENST00000564938 316 ntBASIC3.08□□□□□ -1.92
EBF4Q9BQW3 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.08□□□□□ -1.92
EBF4Q9BQW3 MIR4509-3-201ENST00000578671 94 ntBASIC3.08□□□□□ -1.92
EBF4Q9BQW3 MIR5708-201ENST00000579723 85 ntBASIC3.08□□□□□ -1.92
EBF4Q9BQW3 MIR2682-201ENST00000580305 110 ntBASIC3.08□□□□□ -1.92
EBF4Q9BQW3 MIR4509-2-201ENST00000583920 94 ntBASIC3.08□□□□□ -1.92
EBF4Q9BQW3 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.08□□□□□ -1.92
EBF4Q9BQW3 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.08□□□□□ -1.92
EBF4Q9BQW3 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.08□□□□□ -1.92
EBF4Q9BQW3 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.08□□□□□ -1.92
EBF4Q9BQW3 LLPHP1-201ENST00000603571 367 ntBASIC3.08□□□□□ -1.92
EBF4Q9BQW3 RNU4-5P-201ENST00000607255 135 ntBASIC3.08□□□□□ -1.92
EBF4Q9BQW3 AC087683.2-201ENST00000611384 326 ntBASIC3.08□□□□□ -1.92
EBF4Q9BQW3 uc_338.25-201ENST00000613756 156 ntBASIC3.08□□□□□ -1.92
EBF4Q9BQW3 AL121772.2-201ENST00000614331 297 ntBASIC3.08□□□□□ -1.92
EBF4Q9BQW3 AC079395.3-201ENST00000615161 484 ntBASIC3.08□□□□□ -1.92
EBF4Q9BQW3 AC140725.3-201ENST00000616193 880 ntBASIC3.08□□□□□ -1.92
EBF4Q9BQW3 MIR4509-1-201ENST00000618224 94 ntBASIC3.08□□□□□ -1.92
EBF4Q9BQW3 AL158163.2-201ENST00000619110 700 ntBASIC3.08□□□□□ -1.92
EBF4Q9BQW3 AC006386.1-201ENST00000619436 415 ntBASIC3.08□□□□□ -1.92
EBF4Q9BQW3 AC006963.1-201ENST00000624003 1052 ntBASIC3.08□□□□□ -1.92
EBF4Q9BQW3 AC097655.1-201ENST00000635075 318 ntBASIC3.08□□□□□ -1.92
EBF4Q9BQW3 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.08□□□□□ -1.92
EBF4Q9BQW3 AL122126.1-201ENST00000546905 1318 ntBASIC3.08□□□□□ -1.92
EBF4Q9BQW3 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
EBF4Q9BQW3 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.08□□□□□ -1.92
EBF4Q9BQW3 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
EBF4Q9BQW3 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.08□□□□□ -1.92
EBF4Q9BQW3 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
EBF4Q9BQW3 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
EBF4Q9BQW3 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
EBF4Q9BQW3 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
EBF4Q9BQW3 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.07□□□□□ -1.92
EBF4Q9BQW3 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.07□□□□□ -1.92
EBF4Q9BQW3 AC011978.2-201ENST00000569835 2054 ntBASIC3.07□□□□□ -1.92
EBF4Q9BQW3 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
EBF4Q9BQW3 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
EBF4Q9BQW3 RNU6-224P-201ENST00000384055 107 ntBASIC3.07□□□□□ -1.92
EBF4Q9BQW3 BX323014.1-201ENST00000412876 237 ntBASIC3.07□□□□□ -1.92
EBF4Q9BQW3 AC016769.2-201ENST00000414815 475 ntBASIC3.07□□□□□ -1.92
EBF4Q9BQW3 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.07□□□□□ -1.92
EBF4Q9BQW3 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.07□□□□□ -1.92
EBF4Q9BQW3 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.07□□□□□ -1.92
EBF4Q9BQW3 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.07□□□□□ -1.92
EBF4Q9BQW3 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.07□□□□□ -1.92
EBF4Q9BQW3 OR10R1P-201ENST00000441524 1141 ntBASIC3.07□□□□□ -1.92
EBF4Q9BQW3 ELOCP13-201ENST00000443934 329 ntBASIC3.07□□□□□ -1.92
EBF4Q9BQW3 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.07□□□□□ -1.92
EBF4Q9BQW3 NDUFA5P7-201ENST00000452914 242 ntBASIC3.07□□□□□ -1.92
EBF4Q9BQW3 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.07□□□□□ -1.92
EBF4Q9BQW3 AC092754.2-201ENST00000463506 460 ntBASIC3.07□□□□□ -1.92
EBF4Q9BQW3 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.07□□□□□ -1.92
EBF4Q9BQW3 MTCO3P35-201ENST00000485582 781 ntBASIC3.07□□□□□ -1.92
EBF4Q9BQW3 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.07□□□□□ -1.92
EBF4Q9BQW3 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
EBF4Q9BQW3 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
EBF4Q9BQW3 RN7SKP43-201ENST00000516173 320 ntBASIC3.07□□□□□ -1.92
EBF4Q9BQW3 RNU1-95P-201ENST00000516357 160 ntBASIC3.07□□□□□ -1.92
EBF4Q9BQW3 RNU1-128P-201ENST00000516704 160 ntBASIC3.07□□□□□ -1.92
EBF4Q9BQW3 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.07□□□□□ -1.92
EBF4Q9BQW3 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.07□□□□□ -1.92
EBF4Q9BQW3 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.07□□□□□ -1.92
EBF4Q9BQW3 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.07□□□□□ -1.92
EBF4Q9BQW3 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.07□□□□□ -1.92
EBF4Q9BQW3 OR8L1P-201ENST00000534005 955 ntBASIC3.07□□□□□ -1.92
EBF4Q9BQW3 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.07□□□□□ -1.92
EBF4Q9BQW3 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.07□□□□□ -1.92
EBF4Q9BQW3 AC010198.2-201ENST00000550612 259 ntBASIC3.07□□□□□ -1.92
EBF4Q9BQW3 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.07□□□□□ -1.92
EBF4Q9BQW3 RPL21P12-201ENST00000559810 515 ntBASIC3.07□□□□□ -1.92
EBF4Q9BQW3 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms