Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.14□□□□□ -1.91
ABCA3Q99758 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.14□□□□□ -1.91
ABCA3Q99758 Z99129.2-201ENST00000619967 314 ntBASIC3.14□□□□□ -1.91
ABCA3Q99758 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
ABCA3Q99758 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
ABCA3Q99758 RNA5SP456-201ENST00000364002 114 ntBASIC3.13□□□□□ -1.91
ABCA3Q99758 RPL23AP36-201ENST00000413895 458 ntBASIC3.13□□□□□ -1.91
ABCA3Q99758 AL158825.1-201ENST00000414735 521 ntBASIC3.13□□□□□ -1.91
ABCA3Q99758 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.13□□□□□ -1.91
ABCA3Q99758 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.13□□□□□ -1.91
ABCA3Q99758 AC147055.1-201ENST00000509261 750 ntBASIC3.13□□□□□ -1.91
ABCA3Q99758 AC108729.3-201ENST00000513484 108 ntBASIC3.13□□□□□ -1.91
ABCA3Q99758 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.13□□□□□ -1.91
ABCA3Q99758 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.13□□□□□ -1.91
ABCA3Q99758 MIR8070-201ENST00000616510 88 ntBASIC3.13□□□□□ -1.91
ABCA3Q99758 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ABCA3Q99758 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ABCA3Q99758 GABPAP-201ENST00000419271 1356 ntBASIC3.13□□□□□ -1.91
ABCA3Q99758 AC097714.1-201ENST00000511272 1647 ntBASIC3.13□□□□□ -1.91
ABCA3Q99758 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
ABCA3Q99758 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
ABCA3Q99758 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.13□□□□□ -1.91
ABCA3Q99758 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ABCA3Q99758 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
ABCA3Q99758 RPL9P7-201ENST00000330965 580 ntBASIC3.13□□□□□ -1.91
ABCA3Q99758 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
ABCA3Q99758 AC007390.1-201ENST00000415722 356 ntBASIC3.13□□□□□ -1.91
ABCA3Q99758 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.13□□□□□ -1.91
ABCA3Q99758 AL009174.1-201ENST00000426577 416 ntBASIC3.13□□□□□ -1.91
ABCA3Q99758 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.13□□□□□ -1.91
ABCA3Q99758 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.13□□□□□ -1.91
ABCA3Q99758 SNRPFP2-201ENST00000440710 251 ntBASIC3.13□□□□□ -1.91
ABCA3Q99758 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.13□□□□□ -1.91
ABCA3Q99758 UBE2V2P4-201ENST00000447495 259 ntBASIC3.13□□□□□ -1.91
ABCA3Q99758 AL354710.1-201ENST00000453641 246 ntBASIC3.13□□□□□ -1.91
ABCA3Q99758 AL024509.2-201ENST00000493462 493 ntBASIC3.13□□□□□ -1.91
ABCA3Q99758 AP001086.1-201ENST00000494882 321 ntBASIC3.13□□□□□ -1.91
ABCA3Q99758 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.13□□□□□ -1.91
ABCA3Q99758 AC021733.2-201ENST00000518830 497 ntBASIC3.13□□□□□ -1.91
ABCA3Q99758 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.13□□□□□ -1.91
ABCA3Q99758 MIR6766-201ENST00000622641 72 ntBASIC3.13□□□□□ -1.91
ABCA3Q99758 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
ABCA3Q99758 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.12□□□□□ -1.91
ABCA3Q99758 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ABCA3Q99758 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ABCA3Q99758 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.12□□□□□ -1.91
ABCA3Q99758 AC048351.1-201ENST00000420064 602 ntBASIC3.12□□□□□ -1.91
ABCA3Q99758 AL121882.1-201ENST00000422893 417 ntBASIC3.12□□□□□ -1.91
ABCA3Q99758 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ABCA3Q99758 RPL7P52-201ENST00000449200 742 ntBASIC3.12□□□□□ -1.91
ABCA3Q99758 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.12□□□□□ -1.91
ABCA3Q99758 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.12□□□□□ -1.91
ABCA3Q99758 MTCYBP20-201ENST00000524239 1129 ntBASIC3.12□□□□□ -1.91
ABCA3Q99758 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.12□□□□□ -1.91
ABCA3Q99758 AK6P1-201ENST00000540219 478 ntBASIC3.12□□□□□ -1.91
ABCA3Q99758 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.12□□□□□ -1.91
ABCA3Q99758 AC074029.1-201ENST00000552531 1044 ntBASIC3.12□□□□□ -1.91
ABCA3Q99758 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.12□□□□□ -1.91
ABCA3Q99758 AC026464.5-201ENST00000562497 722 ntBASIC3.12□□□□□ -1.91
ABCA3Q99758 AC104237.2-201ENST00000612456 443 ntBASIC3.12□□□□□ -1.91
ABCA3Q99758 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ABCA3Q99758 AL139156.1-201ENST00000412785 841 ntBASIC3.11□□□□□ -1.91
ABCA3Q99758 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.11□□□□□ -1.91
ABCA3Q99758 AC009414.1-201ENST00000427200 443 ntBASIC3.11□□□□□ -1.91
ABCA3Q99758 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ABCA3Q99758 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.11□□□□□ -1.91
ABCA3Q99758 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.11□□□□□ -1.91
ABCA3Q99758 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC3.11□□□□□ -1.91
ABCA3Q99758 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ABCA3Q99758 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ABCA3Q99758 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.11□□□□□ -1.91
ABCA3Q99758 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
ABCA3Q99758 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ABCA3Q99758 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
ABCA3Q99758 RNA5SP88-201ENST00000365560 109 ntBASIC3.1□□□□□ -1.91
ABCA3Q99758 RNU6-146P-201ENST00000384602 108 ntBASIC3.1□□□□□ -1.91
ABCA3Q99758 RNU6-1320P-201ENST00000390838 107 ntBASIC3.1□□□□□ -1.91
ABCA3Q99758 RNU6-1269P-201ENST00000391139 107 ntBASIC3.1□□□□□ -1.91
ABCA3Q99758 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.1□□□□□ -1.91
ABCA3Q99758 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.1□□□□□ -1.91
ABCA3Q99758 MTCO3P11-201ENST00000455103 774 ntBASIC3.1□□□□□ -1.91
ABCA3Q99758 RNU6-599P-201ENST00000459383 107 ntBASIC3.1□□□□□ -1.91
ABCA3Q99758 RNU6-1193P-201ENST00000459461 107 ntBASIC3.1□□□□□ -1.91
ABCA3Q99758 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.1□□□□□ -1.91
ABCA3Q99758 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.1□□□□□ -1.91
ABCA3Q99758 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.1□□□□□ -1.91
ABCA3Q99758 RNU6-368P-201ENST00000620928 107 ntBASIC3.1□□□□□ -1.91
ABCA3Q99758 RNU6-538P-201ENST00000622329 107 ntBASIC3.1□□□□□ -1.91
ABCA3Q99758 AC025125.1-201ENST00000624743 1922 ntBASIC3.1□□□□□ -1.91
ABCA3Q99758 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.1□□□□□ -1.91
ABCA3Q99758 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.1□□□□□ -1.91
ABCA3Q99758 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
ABCA3Q99758 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
ABCA3Q99758 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
ABCA3Q99758 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
ABCA3Q99758 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.1□□□□□ -1.91
ABCA3Q99758 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
ABCA3Q99758 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
ABCA3Q99758 RNU6-14P-201ENST00000384630 106 ntBASIC3.1□□□□□ -1.91
ABCA3Q99758 RPL7P53-201ENST00000421245 739 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms