Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 RPL21P136-201ENST00000605378 396 ntBASIC3.27□□□□□ -1.89
NPAS2Q99743 AC096577.2-201ENST00000611455 153 ntBASIC3.27□□□□□ -1.89
NPAS2Q99743 VN1R74P-201ENST00000613259 503 ntBASIC3.27□□□□□ -1.89
NPAS2Q99743 AC018755.4-201ENST00000619715 454 ntBASIC3.27□□□□□ -1.89
NPAS2Q99743 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
NPAS2Q99743 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
NPAS2Q99743 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.27□□□□□ -1.89
NPAS2Q99743 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.26□□□□□ -1.89
NPAS2Q99743 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NPAS2Q99743 AC111188.2-201ENST00000529697 1387 ntBASIC3.26□□□□□ -1.89
NPAS2Q99743 MFSD8-233ENST00000641482 4860 ntBASIC3.26□□□□□ -1.89
NPAS2Q99743 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
NPAS2Q99743 AL645568.2-201ENST00000432815 1337 ntBASIC3.26□□□□□ -1.89
NPAS2Q99743 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
NPAS2Q99743 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.26□□□□□ -1.89
NPAS2Q99743 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
NPAS2Q99743 AL024474.1-201ENST00000404655 591 ntBASIC3.26□□□□□ -1.89
NPAS2Q99743 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NPAS2Q99743 AC099677.1-201ENST00000420575 175 ntBASIC3.26□□□□□ -1.89
NPAS2Q99743 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.26□□□□□ -1.89
NPAS2Q99743 HMGN2P20-201ENST00000437531 273 ntBASIC3.26□□□□□ -1.89
NPAS2Q99743 AC241584.1-201ENST00000438469 1241 ntBASIC3.26□□□□□ -1.89
NPAS2Q99743 MTCYBP31-201ENST00000438855 1122 ntBASIC3.26□□□□□ -1.89
NPAS2Q99743 SLC31A1P1-201ENST00000451221 567 ntBASIC3.26□□□□□ -1.89
NPAS2Q99743 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.26□□□□□ -1.89
NPAS2Q99743 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.26□□□□□ -1.89
NPAS2Q99743 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.26□□□□□ -1.89
NPAS2Q99743 RPS20P24-201ENST00000457473 361 ntBASIC3.26□□□□□ -1.89
NPAS2Q99743 AC012181.1-201ENST00000479895 423 ntBASIC3.26□□□□□ -1.89
NPAS2Q99743 GAPDHP39-201ENST00000481866 979 ntBASIC3.26□□□□□ -1.89
NPAS2Q99743 WBP1LP4-201ENST00000505043 344 ntBASIC3.26□□□□□ -1.89
NPAS2Q99743 RNU6-885P-201ENST00000516607 104 ntBASIC3.26□□□□□ -1.89
NPAS2Q99743 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.26□□□□□ -1.89
NPAS2Q99743 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.26□□□□□ -1.89
NPAS2Q99743 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.26□□□□□ -1.89
NPAS2Q99743 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.26□□□□□ -1.89
NPAS2Q99743 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.26□□□□□ -1.89
NPAS2Q99743 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.26□□□□□ -1.89
NPAS2Q99743 AL389895.1-201ENST00000554127 252 ntBASIC3.26□□□□□ -1.89
NPAS2Q99743 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.26□□□□□ -1.89
NPAS2Q99743 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.26□□□□□ -1.89
NPAS2Q99743 AL136520.1-202ENST00000555494 763 ntBASIC3.26□□□□□ -1.89
NPAS2Q99743 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.26□□□□□ -1.89
NPAS2Q99743 RPAP2P1-201ENST00000603626 1168 ntBASIC3.26□□□□□ -1.89
NPAS2Q99743 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.26□□□□□ -1.89
NPAS2Q99743 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NPAS2Q99743 AL590240.3-201ENST00000621416 943 ntBASIC3.26□□□□□ -1.89
NPAS2Q99743 AL360181.4-201ENST00000621752 134 ntBASIC3.26□□□□□ -1.89
NPAS2Q99743 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.26□□□□□ -1.89
NPAS2Q99743 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.26□□□□□ -1.89
NPAS2Q99743 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.26□□□□□ -1.89
NPAS2Q99743 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NPAS2Q99743 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NPAS2Q99743 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
NPAS2Q99743 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
NPAS2Q99743 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
NPAS2Q99743 Y_RNA.110-201ENST00000363220 99 ntBASIC3.25□□□□□ -1.89
NPAS2Q99743 RNA5SP50-201ENST00000363731 107 ntBASIC3.25□□□□□ -1.89
NPAS2Q99743 RNU1-33P-201ENST00000364249 162 ntBASIC3.25□□□□□ -1.89
NPAS2Q99743 RNA5SP72-201ENST00000364442 117 ntBASIC3.25□□□□□ -1.89
NPAS2Q99743 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.25□□□□□ -1.89
NPAS2Q99743 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.25□□□□□ -1.89
NPAS2Q99743 RNU6-575P-201ENST00000411326 105 ntBASIC3.25□□□□□ -1.89
NPAS2Q99743 AC006960.1-201ENST00000419980 153 ntBASIC3.25□□□□□ -1.89
NPAS2Q99743 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.25□□□□□ -1.89
NPAS2Q99743 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.25□□□□□ -1.89
NPAS2Q99743 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.25□□□□□ -1.89
NPAS2Q99743 AC010301.1-201ENST00000473936 355 ntBASIC3.25□□□□□ -1.89
NPAS2Q99743 AC105914.1-201ENST00000511798 226 ntBASIC3.25□□□□□ -1.89
NPAS2Q99743 RNU1-143P-201ENST00000516296 146 ntBASIC3.25□□□□□ -1.89
NPAS2Q99743 SCARNA20.6-201ENST00000517251 106 ntBASIC3.25□□□□□ -1.89
NPAS2Q99743 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
NPAS2Q99743 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.25□□□□□ -1.89
NPAS2Q99743 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.25□□□□□ -1.89
NPAS2Q99743 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.25□□□□□ -1.89
NPAS2Q99743 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.25□□□□□ -1.89
NPAS2Q99743 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.25□□□□□ -1.89
NPAS2Q99743 U1.23-201ENST00000610293 146 ntBASIC3.25□□□□□ -1.89
NPAS2Q99743 RNU1-68P-201ENST00000615382 146 ntBASIC3.25□□□□□ -1.89
NPAS2Q99743 AL355365.1-201ENST00000616480 294 ntBASIC3.25□□□□□ -1.89
NPAS2Q99743 U1.39-201ENST00000621562 146 ntBASIC3.25□□□□□ -1.89
NPAS2Q99743 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.25□□□□□ -1.89
NPAS2Q99743 AC017071.1-201ENST00000564407 2204 ntBASIC3.25□□□□□ -1.89
NPAS2Q99743 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
NPAS2Q99743 NUP58P1-201ENST00000502546 1738 ntBASIC3.24□□□□□ -1.89
NPAS2Q99743 ZNF542P-204ENST00000482727 1305 ntBASIC3.24□□□□□ -1.89
NPAS2Q99743 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.24□□□□□ -1.89
NPAS2Q99743 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.24□□□□□ -1.89
NPAS2Q99743 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.24□□□□□ -1.89
NPAS2Q99743 RNA5SP197-201ENST00000363357 119 ntBASIC3.24□□□□□ -1.89
NPAS2Q99743 RNA5SP267-201ENST00000364893 126 ntBASIC3.24□□□□□ -1.89
NPAS2Q99743 SNORD82-201ENST00000365530 70 ntBASIC3.24□□□□□ -1.89
NPAS2Q99743 RSL24D1P1-201ENST00000404972 493 ntBASIC3.24□□□□□ -1.89
NPAS2Q99743 RNU6-712P-201ENST00000410558 100 ntBASIC3.24□□□□□ -1.89
NPAS2Q99743 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.24□□□□□ -1.89
NPAS2Q99743 HSFY4P-201ENST00000415994 1181 ntBASIC3.24□□□□□ -1.89
NPAS2Q99743 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.24□□□□□ -1.89
NPAS2Q99743 BX842559.1-201ENST00000419615 532 ntBASIC3.24□□□□□ -1.89
NPAS2Q99743 AL049610.1-201ENST00000423374 372 ntBASIC3.24□□□□□ -1.89
NPAS2Q99743 DUTP6-201ENST00000425573 462 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms