Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.91□□□□□ -1.78
NR1H4Q96RI1 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.91□□□□□ -1.78
NR1H4Q96RI1 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.91□□□□□ -1.78
NR1H4Q96RI1 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.91□□□□□ -1.78
NR1H4Q96RI1 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.91□□□□□ -1.78
NR1H4Q96RI1 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC3.91□□□□□ -1.78
NR1H4Q96RI1 AC135628.1-201ENST00000568867 534 ntBASIC3.91□□□□□ -1.78
NR1H4Q96RI1 RN7SL753P-201ENST00000581238 290 ntBASIC3.91□□□□□ -1.78
NR1H4Q96RI1 AC013444.2-201ENST00000603317 787 ntBASIC3.91□□□□□ -1.78
NR1H4Q96RI1 AL031320.1-201ENST00000604177 357 ntBASIC3.91□□□□□ -1.78
NR1H4Q96RI1 AL592436.1-201ENST00000605135 558 ntBASIC3.91□□□□□ -1.78
NR1H4Q96RI1 AL590282.1-201ENST00000610379 1136 ntBASIC3.91□□□□□ -1.78
NR1H4Q96RI1 AL592295.2-201ENST00000612578 206 ntBASIC3.91□□□□□ -1.78
NR1H4Q96RI1 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.91□□□□□ -1.78
NR1H4Q96RI1 AC092192.1-201ENST00000633154 1018 ntBASIC3.91□□□□□ -1.78
NR1H4Q96RI1 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.91□□□□□ -1.78
NR1H4Q96RI1 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NR1H4Q96RI1 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NR1H4Q96RI1 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
NR1H4Q96RI1 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.9□□□□□ -1.78
NR1H4Q96RI1 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
NR1H4Q96RI1 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
NR1H4Q96RI1 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
NR1H4Q96RI1 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
NR1H4Q96RI1 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
NR1H4Q96RI1 RNU6-1074P-201ENST00000383995 104 ntBASIC3.9□□□□□ -1.79
NR1H4Q96RI1 PTMAP5-201ENST00000393073 333 ntBASIC3.9□□□□□ -1.79
NR1H4Q96RI1 RSU1P3-201ENST00000412878 835 ntBASIC3.9□□□□□ -1.79
NR1H4Q96RI1 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.9□□□□□ -1.79
NR1H4Q96RI1 CCDC58P2-201ENST00000417131 366 ntBASIC3.9□□□□□ -1.79
NR1H4Q96RI1 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.9□□□□□ -1.79
NR1H4Q96RI1 BEND7P1-201ENST00000422058 457 ntBASIC3.9□□□□□ -1.79
NR1H4Q96RI1 RPS27AP14-201ENST00000422868 454 ntBASIC3.9□□□□□ -1.79
NR1H4Q96RI1 RPL21P66-201ENST00000426566 466 ntBASIC3.9□□□□□ -1.79
NR1H4Q96RI1 AL132765.1-201ENST00000434165 553 ntBASIC3.9□□□□□ -1.79
NR1H4Q96RI1 UBE2V1P13-201ENST00000436983 439 ntBASIC3.9□□□□□ -1.79
NR1H4Q96RI1 HMGB3P8-201ENST00000449709 577 ntBASIC3.9□□□□□ -1.79
NR1H4Q96RI1 ZNF114P1-201ENST00000453500 292 ntBASIC3.9□□□□□ -1.79
NR1H4Q96RI1 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NR1H4Q96RI1 snoU13.24-201ENST00000458998 104 ntBASIC3.9□□□□□ -1.79
NR1H4Q96RI1 RPL23AP62-201ENST00000463396 453 ntBASIC3.9□□□□□ -1.79
NR1H4Q96RI1 RPL30P9-201ENST00000465586 330 ntBASIC3.9□□□□□ -1.79
NR1H4Q96RI1 RN7SL329P-201ENST00000467740 299 ntBASIC3.9□□□□□ -1.79
NR1H4Q96RI1 RPL23AP14-201ENST00000468281 468 ntBASIC3.9□□□□□ -1.79
NR1H4Q96RI1 AC021382.1-201ENST00000483523 359 ntBASIC3.9□□□□□ -1.79
NR1H4Q96RI1 RPL31P13-201ENST00000484151 370 ntBASIC3.9□□□□□ -1.79
NR1H4Q96RI1 AC112198.1-201ENST00000505369 1220 ntBASIC3.9□□□□□ -1.79
NR1H4Q96RI1 MLLT10P2-201ENST00000506434 249 ntBASIC3.9□□□□□ -1.79
NR1H4Q96RI1 AC004062.1-201ENST00000509926 645 ntBASIC3.9□□□□□ -1.79
NR1H4Q96RI1 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.9□□□□□ -1.79
NR1H4Q96RI1 AC026726.1-201ENST00000512859 601 ntBASIC3.9□□□□□ -1.79
NR1H4Q96RI1 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.9□□□□□ -1.79
NR1H4Q96RI1 RNU6-1073P-201ENST00000517182 106 ntBASIC3.9□□□□□ -1.79
NR1H4Q96RI1 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NR1H4Q96RI1 AC103783.1-201ENST00000520506 373 ntBASIC3.9□□□□□ -1.79
NR1H4Q96RI1 AC106038.2-201ENST00000520706 568 ntBASIC3.9□□□□□ -1.79
NR1H4Q96RI1 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.9□□□□□ -1.79
NR1H4Q96RI1 AC023161.2-201ENST00000551218 780 ntBASIC3.9□□□□□ -1.79
NR1H4Q96RI1 EDDM3DP-201ENST00000554692 434 ntBASIC3.9□□□□□ -1.79
NR1H4Q96RI1 MIR544B-201ENST00000582372 78 ntBASIC3.9□□□□□ -1.79
NR1H4Q96RI1 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.9□□□□□ -1.79
NR1H4Q96RI1 PRELID3BP8-201ENST00000604148 295 ntBASIC3.9□□□□□ -1.79
NR1H4Q96RI1 RNVU1-4-201ENST00000612985 164 ntBASIC3.9□□□□□ -1.79
NR1H4Q96RI1 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.9□□□□□ -1.79
NR1H4Q96RI1 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.9□□□□□ -1.79
NR1H4Q96RI1 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.9□□□□□ -1.79
NR1H4Q96RI1 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NR1H4Q96RI1 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NR1H4Q96RI1 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
NR1H4Q96RI1 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.9□□□□□ -1.79
NR1H4Q96RI1 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NR1H4Q96RI1 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NR1H4Q96RI1 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.9□□□□□ -1.79
NR1H4Q96RI1 ZNF137P-201ENST00000456718 1920 ntBASIC3.89□□□□□ -1.79
NR1H4Q96RI1 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
NR1H4Q96RI1 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
NR1H4Q96RI1 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
NR1H4Q96RI1 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
NR1H4Q96RI1 RNU11-4P-201ENST00000391149 133 ntBASIC3.89□□□□□ -1.79
NR1H4Q96RI1 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.89□□□□□ -1.79
NR1H4Q96RI1 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.89□□□□□ -1.79
NR1H4Q96RI1 AC109780.2-201ENST00000413467 845 ntBASIC3.89□□□□□ -1.79
NR1H4Q96RI1 HSFY4P-201ENST00000415994 1181 ntBASIC3.89□□□□□ -1.79
NR1H4Q96RI1 TOMM22P1-201ENST00000418578 312 ntBASIC3.89□□□□□ -1.79
NR1H4Q96RI1 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.89□□□□□ -1.79
NR1H4Q96RI1 AL389915.1-201ENST00000422463 466 ntBASIC3.89□□□□□ -1.79
NR1H4Q96RI1 AC002075.2-201ENST00000425207 252 ntBASIC3.89□□□□□ -1.79
NR1H4Q96RI1 AL512649.1-201ENST00000428997 581 ntBASIC3.89□□□□□ -1.79
NR1H4Q96RI1 KCTD9P3-201ENST00000434597 1169 ntBASIC3.89□□□□□ -1.79
NR1H4Q96RI1 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.89□□□□□ -1.79
NR1H4Q96RI1 RSU1P2-202ENST00000437884 485 ntBASIC3.89□□□□□ -1.79
NR1H4Q96RI1 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.89□□□□□ -1.79
NR1H4Q96RI1 AC108734.1-201ENST00000439549 399 ntBASIC3.89□□□□□ -1.79
NR1H4Q96RI1 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC3.89□□□□□ -1.79
NR1H4Q96RI1 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.89□□□□□ -1.79
NR1H4Q96RI1 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.89□□□□□ -1.79
NR1H4Q96RI1 RPS24P6-201ENST00000452670 400 ntBASIC3.89□□□□□ -1.79
NR1H4Q96RI1 DNAJC19P1-201ENST00000455312 319 ntBASIC3.89□□□□□ -1.79
NR1H4Q96RI1 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.89□□□□□ -1.79
NR1H4Q96RI1 MTND3P7-201ENST00000474435 343 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms