Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 RMST_2.1-201ENST00000617263 136 ntBASIC1.98□□□□□ -2.09
CSMD1Q96PZ7 AC138915.3-201ENST00000562908 1389 ntBASIC1.97□□□□□ -2.09
CSMD1Q96PZ7 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC1.97□□□□□ -2.09
CSMD1Q96PZ7 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC1.97□□□□□ -2.09
CSMD1Q96PZ7 OR52B1P-201ENST00000316506 909 ntBASIC1.97□□□□□ -2.09
CSMD1Q96PZ7 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.97□□□□□ -2.09
CSMD1Q96PZ7 AC126177.3-201ENST00000551839 688 ntBASIC1.97□□□□□ -2.09
CSMD1Q96PZ7 AC135628.1-201ENST00000568867 534 ntBASIC1.97□□□□□ -2.09
CSMD1Q96PZ7 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CSMD1Q96PZ7 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
CSMD1Q96PZ7 AL591416.1-201ENST00000404015 867 ntBASIC1.97□□□□□ -2.09
CSMD1Q96PZ7 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC1.97□□□□□ -2.09
CSMD1Q96PZ7 RPS15AP6-201ENST00000420703 385 ntBASIC1.97□□□□□ -2.09
CSMD1Q96PZ7 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC1.97□□□□□ -2.09
CSMD1Q96PZ7 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC1.97□□□□□ -2.09
CSMD1Q96PZ7 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC1.97□□□□□ -2.09
CSMD1Q96PZ7 TVP23BP2-201ENST00000455082 615 ntBASIC1.97□□□□□ -2.09
CSMD1Q96PZ7 RNA5SP380-201ENST00000517190 98 ntBASIC1.97□□□□□ -2.09
CSMD1Q96PZ7 AP004372.1-201ENST00000604842 844 ntBASIC1.97□□□□□ -2.09
CSMD1Q96PZ7 AL353684.1-201ENST00000622677 1120 ntBASIC1.97□□□□□ -2.09
CSMD1Q96PZ7 AC093311.1-201ENST00000506586 2021 ntBASIC1.97□□□□□ -2.09
CSMD1Q96PZ7 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CSMD1Q96PZ7 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CSMD1Q96PZ7 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC1.97□□□□□ -2.09
CSMD1Q96PZ7 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
CSMD1Q96PZ7 AC004987.3-201ENST00000413879 771 ntBASIC1.97□□□□□ -2.09
CSMD1Q96PZ7 RPL23AP14-201ENST00000468281 468 ntBASIC1.97□□□□□ -2.09
CSMD1Q96PZ7 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC1.97□□□□□ -2.09
CSMD1Q96PZ7 ACTR6P1-201ENST00000514311 1104 ntBASIC1.97□□□□□ -2.09
CSMD1Q96PZ7 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
CSMD1Q96PZ7 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC1.97□□□□□ -2.09
CSMD1Q96PZ7 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
CSMD1Q96PZ7 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC1.96□□□□□ -2.1
CSMD1Q96PZ7 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CSMD1Q96PZ7 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CSMD1Q96PZ7 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CSMD1Q96PZ7 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CSMD1Q96PZ7 RNU2-17P-201ENST00000410290 190 ntBASIC1.96□□□□□ -2.1
CSMD1Q96PZ7 AC125238.1-201ENST00000448842 249 ntBASIC1.96□□□□□ -2.1
CSMD1Q96PZ7 APOOP1-201ENST00000604695 592 ntBASIC1.96□□□□□ -2.1
CSMD1Q96PZ7 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.96□□□□□ -2.1
CSMD1Q96PZ7 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.96□□□□□ -2.1
CSMD1Q96PZ7 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC1.96□□□□□ -2.1
CSMD1Q96PZ7 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
CSMD1Q96PZ7 PHKBP1-201ENST00000450951 1951 ntBASIC1.96□□□□□ -2.1
CSMD1Q96PZ7 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CSMD1Q96PZ7 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CSMD1Q96PZ7 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.96□□□□□ -2.1
CSMD1Q96PZ7 RNU6-457P-201ENST00000363999 107 ntBASIC1.96□□□□□ -2.1
CSMD1Q96PZ7 RNU6-392P-201ENST00000364926 101 ntBASIC1.96□□□□□ -2.1
CSMD1Q96PZ7 AL451074.5-201ENST00000415894 435 ntBASIC1.96□□□□□ -2.1
CSMD1Q96PZ7 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.96□□□□□ -2.1
CSMD1Q96PZ7 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC1.96□□□□□ -2.1
CSMD1Q96PZ7 RAC1P5-201ENST00000512182 576 ntBASIC1.96□□□□□ -2.1
CSMD1Q96PZ7 AC061975.8-201ENST00000587058 721 ntBASIC1.96□□□□□ -2.1
CSMD1Q96PZ7 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.96□□□□□ -2.1
CSMD1Q96PZ7 Z99496.1-201ENST00000469424 1477 ntBASIC1.96□□□□□ -2.1
CSMD1Q96PZ7 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC1.96□□□□□ -2.1
CSMD1Q96PZ7 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
CSMD1Q96PZ7 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.95□□□□□ -2.1
CSMD1Q96PZ7 AL390023.1-201ENST00000428836 262 ntBASIC1.95□□□□□ -2.1
CSMD1Q96PZ7 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.95□□□□□ -2.1
CSMD1Q96PZ7 AC147055.1-201ENST00000509261 750 ntBASIC1.95□□□□□ -2.1
CSMD1Q96PZ7 MEPE-206ENST00000511670 550 ntTSL 4 BASIC1.95□□□□□ -2.1
CSMD1Q96PZ7 AP001207.1-201ENST00000524051 481 ntBASIC1.95□□□□□ -2.1
CSMD1Q96PZ7 AC092628.2-201ENST00000622492 339 ntBASIC1.95□□□□□ -2.1
CSMD1Q96PZ7 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
CSMD1Q96PZ7 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
CSMD1Q96PZ7 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
CSMD1Q96PZ7 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CSMD1Q96PZ7 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.95□□□□□ -2.1
CSMD1Q96PZ7 AL139156.1-201ENST00000412785 841 ntBASIC1.95□□□□□ -2.1
CSMD1Q96PZ7 ATG3P1-201ENST00000419507 911 ntBASIC1.95□□□□□ -2.1
CSMD1Q96PZ7 HMGN1P33-201ENST00000432945 451 ntBASIC1.95□□□□□ -2.1
CSMD1Q96PZ7 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.95□□□□□ -2.1
CSMD1Q96PZ7 FGF7P3-201ENST00000454645 303 ntBASIC1.95□□□□□ -2.1
CSMD1Q96PZ7 AC133473.1-201ENST00000455173 299 ntBASIC1.95□□□□□ -2.1
CSMD1Q96PZ7 AL020991.1-201ENST00000612314 373 ntBASIC1.95□□□□□ -2.1
CSMD1Q96PZ7 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC1.95□□□□□ -2.1
CSMD1Q96PZ7 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC1.95□□□□□ -2.1
CSMD1Q96PZ7 AC091046.2-201ENST00000620775 665 ntBASIC1.95□□□□□ -2.1
CSMD1Q96PZ7 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC1.95□□□□□ -2.1
CSMD1Q96PZ7 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC1.95□□□□□ -2.1
CSMD1Q96PZ7 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC1.95□□□□□ -2.1
CSMD1Q96PZ7 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.95□□□□□ -2.1
CSMD1Q96PZ7 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC1.95□□□□□ -2.1
CSMD1Q96PZ7 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC1.95□□□□□ -2.1
CSMD1Q96PZ7 REXO2-218ENST00000544827 880 ntTSL 3 BASIC1.95□□□□□ -2.1
CSMD1Q96PZ7 ARL2BPP2-201ENST00000550907 489 ntBASIC1.95□□□□□ -2.1
CSMD1Q96PZ7 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.95□□□□□ -2.1
CSMD1Q96PZ7 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
CSMD1Q96PZ7 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
CSMD1Q96PZ7 AC011978.2-201ENST00000569835 2054 ntBASIC1.94□□□□□ -2.1
CSMD1Q96PZ7 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC1.94□□□□□ -2.1
CSMD1Q96PZ7 AL590399.6-201ENST00000446396 307 ntBASIC1.94□□□□□ -2.1
CSMD1Q96PZ7 TXNP6-201ENST00000510190 310 ntBASIC1.94□□□□□ -2.1
CSMD1Q96PZ7 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CSMD1Q96PZ7 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.94□□□□□ -2.1
CSMD1Q96PZ7 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.94□□□□□ -2.1
CSMD1Q96PZ7 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms