Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC138Q96M89 OR4K8P-201ENST00000578842 1048 ntBASIC4.39□□□□□ -1.71
CCDC138Q96M89 AC069061.3-201ENST00000582254 823 ntBASIC4.39□□□□□ -1.71
CCDC138Q96M89 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC138Q96M89 AC073544.2-201ENST00000601155 540 ntBASIC4.39□□□□□ -1.71
CCDC138Q96M89 AC008745.1-201ENST00000604064 271 ntBASIC4.39□□□□□ -1.71
CCDC138Q96M89 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.39□□□□□ -1.71
CCDC138Q96M89 AL161637.1-201ENST00000622380 412 ntBASIC4.39□□□□□ -1.71
CCDC138Q96M89 AP000346.3-201ENST00000622821 210 ntBASIC4.39□□□□□ -1.71
CCDC138Q96M89 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.39□□□□□ -1.71
CCDC138Q96M89 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC138Q96M89 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
CCDC138Q96M89 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC138Q96M89 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.39□□□□□ -1.71
CCDC138Q96M89 MTND5P33-201ENST00000571250 1450 ntBASIC4.38□□□□□ -1.71
CCDC138Q96M89 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC138Q96M89 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CCDC138Q96M89 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC138Q96M89 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CCDC138Q96M89 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC138Q96M89 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC138Q96M89 SNORA31-201ENST00000362607 130 ntBASIC4.38□□□□□ -1.71
CCDC138Q96M89 RNU6-1078P-201ENST00000364522 103 ntBASIC4.38□□□□□ -1.71
CCDC138Q96M89 RNU1-63P-201ENST00000383902 164 ntBASIC4.38□□□□□ -1.71
CCDC138Q96M89 RNU6-533P-201ENST00000384144 107 ntBASIC4.38□□□□□ -1.71
CCDC138Q96M89 MIR135A2-201ENST00000384854 100 ntBASIC4.38□□□□□ -1.71
CCDC138Q96M89 RNA5SP332-201ENST00000391063 115 ntBASIC4.38□□□□□ -1.71
CCDC138Q96M89 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC138Q96M89 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.38□□□□□ -1.71
CCDC138Q96M89 RPEP3-201ENST00000425462 676 ntBASIC4.38□□□□□ -1.71
CCDC138Q96M89 TAF9P1-201ENST00000445421 515 ntBASIC4.38□□□□□ -1.71
CCDC138Q96M89 RPL23AP43-201ENST00000446445 471 ntBASIC4.38□□□□□ -1.71
CCDC138Q96M89 AC010655.1-201ENST00000449336 292 ntBASIC4.38□□□□□ -1.71
CCDC138Q96M89 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC138Q96M89 TAF9P2-201ENST00000454958 515 ntBASIC4.38□□□□□ -1.71
CCDC138Q96M89 SNRPFP4-201ENST00000456366 242 ntBASIC4.38□□□□□ -1.71
CCDC138Q96M89 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CCDC138Q96M89 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC138Q96M89 RPL31P13-201ENST00000484151 370 ntBASIC4.38□□□□□ -1.71
CCDC138Q96M89 AC013356.1-201ENST00000489027 564 ntBASIC4.38□□□□□ -1.71
CCDC138Q96M89 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC138Q96M89 RPL7P23-201ENST00000493874 747 ntBASIC4.38□□□□□ -1.71
CCDC138Q96M89 AC112204.1-201ENST00000502591 103 ntBASIC4.38□□□□□ -1.71
CCDC138Q96M89 MTCO3P28-201ENST00000513351 515 ntBASIC4.38□□□□□ -1.71
CCDC138Q96M89 FABP5P5-201ENST00000515537 406 ntBASIC4.38□□□□□ -1.71
CCDC138Q96M89 AC090151.1-201ENST00000520784 730 ntBASIC4.38□□□□□ -1.71
CCDC138Q96M89 AP004242.1-201ENST00000533701 349 ntBASIC4.38□□□□□ -1.71
CCDC138Q96M89 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC138Q96M89 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.38□□□□□ -1.71
CCDC138Q96M89 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CCDC138Q96M89 AC009101.1-201ENST00000568135 242 ntBASIC4.38□□□□□ -1.71
CCDC138Q96M89 AC012414.6-201ENST00000568241 401 ntBASIC4.38□□□□□ -1.71
CCDC138Q96M89 MIR5697-201ENST00000578045 78 ntBASIC4.38□□□□□ -1.71
CCDC138Q96M89 AC060771.1-201ENST00000582031 164 ntBASIC4.38□□□□□ -1.71
CCDC138Q96M89 AP002360.3-201ENST00000607673 710 ntBASIC4.38□□□□□ -1.71
CCDC138Q96M89 AC239868.4-201ENST00000608318 671 ntBASIC4.38□□□□□ -1.71
CCDC138Q96M89 AL590282.1-201ENST00000610379 1136 ntBASIC4.38□□□□□ -1.71
CCDC138Q96M89 AC025594.3-201ENST00000613068 790 ntBASIC4.38□□□□□ -1.71
CCDC138Q96M89 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC138Q96M89 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CCDC138Q96M89 AC112200.1-201ENST00000625015 234 ntBASIC4.38□□□□□ -1.71
CCDC138Q96M89 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.38□□□□□ -1.71
CCDC138Q96M89 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC138Q96M89 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC138Q96M89 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC138Q96M89 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC138Q96M89 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC138Q96M89 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC138Q96M89 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CCDC138Q96M89 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC138Q96M89 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC138Q96M89 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC138Q96M89 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC138Q96M89 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC138Q96M89 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC138Q96M89 MIR607-201ENST00000385241 96 ntBASIC4.37□□□□□ -1.71
CCDC138Q96M89 RN7SKP142-201ENST00000411236 328 ntBASIC4.37□□□□□ -1.71
CCDC138Q96M89 RNA5SP39-201ENST00000411245 120 ntBASIC4.37□□□□□ -1.71
CCDC138Q96M89 UQCRBP1-201ENST00000421129 336 ntBASIC4.37□□□□□ -1.71
CCDC138Q96M89 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4.37□□□□□ -1.71
CCDC138Q96M89 AL360221.1-201ENST00000445989 335 ntBASIC4.37□□□□□ -1.71
CCDC138Q96M89 AL590365.1-201ENST00000450788 243 ntBASIC4.37□□□□□ -1.71
CCDC138Q96M89 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC138Q96M89 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC138Q96M89 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC138Q96M89 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC138Q96M89 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC138Q96M89 RN7SL738P-201ENST00000470264 297 ntBASIC4.37□□□□□ -1.71
CCDC138Q96M89 RPS29P22-201ENST00000472363 168 ntBASIC4.37□□□□□ -1.71
CCDC138Q96M89 AC096751.1-202ENST00000502691 1067 ntBASIC4.37□□□□□ -1.71
CCDC138Q96M89 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CCDC138Q96M89 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC138Q96M89 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CCDC138Q96M89 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC138Q96M89 KCTD9P2-201ENST00000512203 1013 ntBASIC4.37□□□□□ -1.71
CCDC138Q96M89 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.37□□□□□ -1.71
CCDC138Q96M89 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC138Q96M89 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC138Q96M89 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC138Q96M89 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms