Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.68□□□□□ -1.98
LMX1AQ8TE12 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.68□□□□□ -1.98
LMX1AQ8TE12 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.68□□□□□ -1.98
LMX1AQ8TE12 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.68□□□□□ -1.98
LMX1AQ8TE12 AC093278.1-201ENST00000494700 600 ntBASIC2.68□□□□□ -1.98
LMX1AQ8TE12 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.68□□□□□ -1.98
LMX1AQ8TE12 AC006445.2-201ENST00000510061 472 ntBASIC2.68□□□□□ -1.98
LMX1AQ8TE12 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.68□□□□□ -1.98
LMX1AQ8TE12 AC245166.1-201ENST00000521012 253 ntBASIC2.68□□□□□ -1.98
LMX1AQ8TE12 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.68□□□□□ -1.98
LMX1AQ8TE12 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.68□□□□□ -1.98
LMX1AQ8TE12 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.68□□□□□ -1.98
LMX1AQ8TE12 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC2.68□□□□□ -1.98
LMX1AQ8TE12 AP004607.9-201ENST00000618202 316 ntBASIC2.68□□□□□ -1.98
LMX1AQ8TE12 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.68□□□□□ -1.98
LMX1AQ8TE12 U6.48-201ENST00000618523 106 ntBASIC2.68□□□□□ -1.98
LMX1AQ8TE12 SNORA50A-202ENST00000629536 136 ntBASIC2.68□□□□□ -1.98
LMX1AQ8TE12 AL049780.3-201ENST00000624612 1583 ntBASIC2.68□□□□□ -1.98
LMX1AQ8TE12 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
LMX1AQ8TE12 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
LMX1AQ8TE12 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
LMX1AQ8TE12 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
LMX1AQ8TE12 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.67□□□□□ -1.98
LMX1AQ8TE12 SNORA51.2-201ENST00000364595 132 ntBASIC2.67□□□□□ -1.98
LMX1AQ8TE12 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
LMX1AQ8TE12 DYNLT3P1-201ENST00000378574 347 ntBASIC2.67□□□□□ -1.98
LMX1AQ8TE12 RN7SKP284-201ENST00000411002 343 ntBASIC2.67□□□□□ -1.98
LMX1AQ8TE12 MTND2P16-201ENST00000419987 799 ntBASIC2.67□□□□□ -1.98
LMX1AQ8TE12 OR2AS1P-201ENST00000427827 319 ntBASIC2.67□□□□□ -1.98
LMX1AQ8TE12 AL513043.1-201ENST00000439124 535 ntBASIC2.67□□□□□ -1.98
LMX1AQ8TE12 RPL32P28-201ENST00000443577 397 ntBASIC2.67□□□□□ -1.98
LMX1AQ8TE12 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC2.67□□□□□ -1.98
LMX1AQ8TE12 PTGES3P5-201ENST00000455109 434 ntBASIC2.67□□□□□ -1.98
LMX1AQ8TE12 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.67□□□□□ -1.98
LMX1AQ8TE12 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.67□□□□□ -1.98
LMX1AQ8TE12 AC008565.1-201ENST00000509046 885 ntBASIC2.67□□□□□ -1.98
LMX1AQ8TE12 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.67□□□□□ -1.98
LMX1AQ8TE12 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.67□□□□□ -1.98
LMX1AQ8TE12 RNU4-29P-201ENST00000515943 174 ntBASIC2.67□□□□□ -1.98
LMX1AQ8TE12 AP003102.1-201ENST00000525638 661 ntBASIC2.67□□□□□ -1.98
LMX1AQ8TE12 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.67□□□□□ -1.98
LMX1AQ8TE12 AC007954.1-201ENST00000554198 494 ntBASIC2.67□□□□□ -1.98
LMX1AQ8TE12 AC012414.2-201ENST00000559474 187 ntBASIC2.67□□□□□ -1.98
LMX1AQ8TE12 AC090616.5-202ENST00000582111 297 ntBASIC2.67□□□□□ -1.98
LMX1AQ8TE12 AC006023.2-201ENST00000609916 167 ntBASIC2.67□□□□□ -1.98
LMX1AQ8TE12 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
LMX1AQ8TE12 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
LMX1AQ8TE12 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.66□□□□□ -1.98
LMX1AQ8TE12 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
LMX1AQ8TE12 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
LMX1AQ8TE12 SNORA27.3-201ENST00000364937 134 ntBASIC2.66□□□□□ -1.98
LMX1AQ8TE12 AC083799.1-201ENST00000366451 910 ntBASIC2.66□□□□□ -1.98
LMX1AQ8TE12 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC2.66□□□□□ -1.98
LMX1AQ8TE12 AL583834.1-201ENST00000406943 343 ntBASIC2.66□□□□□ -1.98
LMX1AQ8TE12 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.66□□□□□ -1.98
LMX1AQ8TE12 NUP35P2-201ENST00000416748 943 ntBASIC2.66□□□□□ -1.98
LMX1AQ8TE12 MRPL50P2-201ENST00000416821 482 ntBASIC2.66□□□□□ -1.98
LMX1AQ8TE12 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC2.66□□□□□ -1.98
LMX1AQ8TE12 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC2.66□□□□□ -1.98
LMX1AQ8TE12 AL662791.1-201ENST00000441992 928 ntBASIC2.66□□□□□ -1.98
LMX1AQ8TE12 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC2.66□□□□□ -1.98
LMX1AQ8TE12 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC2.66□□□□□ -1.98
LMX1AQ8TE12 RPL23AP15-201ENST00000450202 459 ntBASIC2.66□□□□□ -1.98
LMX1AQ8TE12 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.66□□□□□ -1.98
LMX1AQ8TE12 EEF1B2P7-201ENST00000451177 676 ntBASIC2.66□□□□□ -1.98
LMX1AQ8TE12 AC092754.2-201ENST00000463506 460 ntBASIC2.66□□□□□ -1.98
LMX1AQ8TE12 RPL21P104-201ENST00000464143 478 ntBASIC2.66□□□□□ -1.98
LMX1AQ8TE12 AC126121.1-201ENST00000482313 553 ntBASIC2.66□□□□□ -1.98
LMX1AQ8TE12 RN7SL283P-201ENST00000489055 303 ntBASIC2.66□□□□□ -1.98
LMX1AQ8TE12 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.66□□□□□ -1.98
LMX1AQ8TE12 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC2.66□□□□□ -1.98
LMX1AQ8TE12 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.66□□□□□ -1.98
LMX1AQ8TE12 AC096725.1-201ENST00000514266 313 ntBASIC2.66□□□□□ -1.98
LMX1AQ8TE12 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC2.66□□□□□ -1.98
LMX1AQ8TE12 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC2.66□□□□□ -1.98
LMX1AQ8TE12 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.66□□□□□ -1.98
LMX1AQ8TE12 AL157394.1-201ENST00000562983 1224 ntBASIC2.66□□□□□ -1.98
LMX1AQ8TE12 AC009097.3-201ENST00000563557 1018 ntBASIC2.66□□□□□ -1.98
LMX1AQ8TE12 MTATP6P25-201ENST00000574491 261 ntBASIC2.66□□□□□ -1.98
LMX1AQ8TE12 AC008277.2-201ENST00000605196 797 ntBASIC2.66□□□□□ -1.98
LMX1AQ8TE12 AC107294.1-201ENST00000609524 467 ntBASIC2.66□□□□□ -1.98
LMX1AQ8TE12 AC090115.4-201ENST00000609970 188 ntBASIC2.66□□□□□ -1.98
LMX1AQ8TE12 AL020991.1-201ENST00000612314 373 ntBASIC2.66□□□□□ -1.98
LMX1AQ8TE12 AC231759.1-201ENST00000616455 597 ntBASIC2.66□□□□□ -1.98
LMX1AQ8TE12 AL355493.4-201ENST00000618530 292 ntBASIC2.66□□□□□ -1.98
LMX1AQ8TE12 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
LMX1AQ8TE12 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
LMX1AQ8TE12 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.66□□□□□ -1.98
LMX1AQ8TE12 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.65□□□□□ -1.99
LMX1AQ8TE12 RPL9P7-201ENST00000330965 580 ntBASIC2.65□□□□□ -1.99
LMX1AQ8TE12 MIR26A1-201ENST00000362205 77 ntBASIC2.65□□□□□ -1.99
LMX1AQ8TE12 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.65□□□□□ -1.99
LMX1AQ8TE12 AL356057.3-201ENST00000402607 340 ntBASIC2.65□□□□□ -1.99
LMX1AQ8TE12 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.65□□□□□ -1.99
LMX1AQ8TE12 SDCBPP3-201ENST00000419629 891 ntBASIC2.65□□□□□ -1.99
LMX1AQ8TE12 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.65□□□□□ -1.99
LMX1AQ8TE12 CKS1BP5-201ENST00000434172 273 ntBASIC2.65□□□□□ -1.99
LMX1AQ8TE12 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.65□□□□□ -1.99
LMX1AQ8TE12 TRAPPC13P1-201ENST00000435991 1062 ntBASIC2.65□□□□□ -1.99
LMX1AQ8TE12 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms