Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AL355578.1-201ENST00000607405 1328 ntBASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 RNU6-629P-201ENST00000384061 103 ntBASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 RNU6-1151P-201ENST00000384684 107 ntBASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 SNORA48.2-201ENST00000390926 124 ntBASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 U3.42-201ENST00000408746 214 ntBASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 OFD1P18Y-201ENST00000420889 959 ntBASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 AC093151.1-201ENST00000427711 313 ntBASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 PTP4A1P3-201ENST00000433661 420 ntBASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 RPS7P2-201ENST00000435134 607 ntBASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 snoU13.24-201ENST00000458998 104 ntBASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 AC010285.1-201ENST00000470580 392 ntBASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 RPS17P11-201ENST00000474297 293 ntBASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 AC012181.1-201ENST00000479895 423 ntBASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 HMGB1P22-201ENST00000505315 124 ntBASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 AC133963.2-201ENST00000513686 578 ntBASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 AC092470.1-201ENST00000546187 132 ntBASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 H3F3AP1-201ENST00000559984 334 ntBASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 MIR4474-201ENST00000579189 78 ntBASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 MAGOH2P-202ENST00000584384 429 ntBASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 AL162274.2-201ENST00000614406 332 ntBASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 AP001002.2-201ENST00000625137 386 ntBASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 FRG1DP-201ENST00000635586 771 ntBASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.62□□□□□ -1.99
ZIC4Q8N9L1 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 OR5H2-201ENST00000355273 945 ntBASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 DEFB109C-201ENST00000382575 264 ntBASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 DEFB109B-201ENST00000382656 264 ntBASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 RNU6-444P-201ENST00000383988 108 ntBASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 ATP5F1P6-201ENST00000402768 767 ntBASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 RNA5SP344-201ENST00000411081 104 ntBASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 UBE2V1P9-201ENST00000414760 368 ntBASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 AC008280.1-201ENST00000418851 412 ntBASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 RPL35AP12-201ENST00000425362 338 ntBASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 MTND4LP7-201ENST00000431728 294 ntBASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 AL034418.1-201ENST00000448675 860 ntBASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 AL162389.1-201ENST00000449233 177 ntBASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 RSL24D1P3-201ENST00000449255 495 ntBASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 BX248409.1-201ENST00000455497 255 ntBASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 NECAP1P2-201ENST00000455668 727 ntBASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 AC089999.1-201ENST00000460336 374 ntBASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 RNA5SP468-201ENST00000516782 93 ntBASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 AC113192.3-201ENST00000529152 742 ntBASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 AC010198.2-201ENST00000550612 259 ntBASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 AL163153.1-201ENST00000554223 283 ntBASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 AC015871.2-201ENST00000603605 948 ntBASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 AC016877.3-201ENST00000606778 504 ntBASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 AC084035.1-201ENST00000634543 607 ntBASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 MTND5P19-201ENST00000424872 1794 ntBASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 FAM35CP-201ENST00000554755 2470 ntBASIC2.61□□□□□ -1.99
ZIC4Q8N9L1 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 AC000403.1-201ENST00000613696 3585 ntBASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 ZNF833P-201ENST00000424938 1494 ntBASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 AC004925.1-201ENST00000624256 2706 ntBASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 SNORA51.4-201ENST00000364993 124 ntBASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 RNU6-1226P-201ENST00000384317 107 ntBASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 Y_RNA.493-201ENST00000384422 102 ntBASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 SNORA44-201ENST00000384584 132 ntBASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 MIR128-1-201ENST00000384921 82 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms