Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 NAA50-211ENST00000630058 177 ntTSL 5 BASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 AC139769.1-204ENST00000472297 1931 ntBASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 AC025470.1-201ENST00000510053 2032 ntBASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 AC007938.2-201ENST00000604666 2634 ntBASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 Y_RNA.2-201ENST00000362330 96 ntBASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 RNU6-263P-201ENST00000363811 107 ntBASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 RNU6-371P-201ENST00000364283 108 ntBASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 RNU6-99P-201ENST00000364721 107 ntBASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 SNORA64.3-201ENST00000365647 134 ntBASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 DEFB109C-201ENST00000382575 264 ntBASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 DEFB109B-201ENST00000382656 264 ntBASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 RNU6-1109P-201ENST00000391187 107 ntBASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 RNU6-101P-201ENST00000410323 104 ntBASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 AC097713.2-201ENST00000430199 356 ntBASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 AL591212.2-201ENST00000433923 257 ntBASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 EIF5AP4-201ENST00000441206 465 ntBASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 TIMM8BP2-201ENST00000445940 251 ntBASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 AC007686.1-201ENST00000488511 463 ntBASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 HIGD1AP14-201ENST00000507617 282 ntBASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 AC092436.3-201ENST00000511788 257 ntBASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 SUB1P3-201ENST00000564581 315 ntBASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 MIR5692A1-201ENST00000580523 69 ntBASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 AL355297.3-201ENST00000604082 446 ntBASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 AC018889.1-201ENST00000605372 397 ntBASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 MIR6823-201ENST00000622118 61 ntBASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 AC073488.9-201ENST00000631601 754 ntBASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
DEPDC4Q8N2C3 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 RNU6-306P-201ENST00000384617 107 ntBASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 RNU6-837P-201ENST00000391056 108 ntBASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 GLULP6-201ENST00000399502 913 ntBASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 RNU2-23P-201ENST00000410545 195 ntBASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 RNU6-712P-201ENST00000410558 100 ntBASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 USP9YP16-201ENST00000430287 407 ntBASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 AC128677.1-201ENST00000436016 442 ntBASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 AC011816.1-201ENST00000441346 546 ntBASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 AC118758.1-202ENST00000454719 225 ntBASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 USP9YP23-201ENST00000455085 407 ntBASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 RPL21P41-201ENST00000459863 264 ntBASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 AP000926.1-201ENST00000479573 241 ntBASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 RN7SL170P-201ENST00000487098 295 ntBASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 AC008945.1-201ENST00000505144 499 ntBASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 Y_RNA.668-201ENST00000516233 93 ntBASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 AC022616.4-201ENST00000522985 181 ntBASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 TRIM77BP-201ENST00000524985 1119 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms