Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.45□□□□□ -1.7
VRK3Q8IV63 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.45□□□□□ -1.7
VRK3Q8IV63 RN7SKP46-201ENST00000515942 234 ntBASIC4.45□□□□□ -1.7
VRK3Q8IV63 RNU6-835P-201ENST00000516974 104 ntBASIC4.45□□□□□ -1.7
VRK3Q8IV63 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.45□□□□□ -1.7
VRK3Q8IV63 AC008562.1-201ENST00000521763 330 ntBASIC4.45□□□□□ -1.7
VRK3Q8IV63 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VRK3Q8IV63 AC090502.2-201ENST00000549267 280 ntBASIC4.45□□□□□ -1.7
VRK3Q8IV63 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.45□□□□□ -1.7
VRK3Q8IV63 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.45□□□□□ -1.7
VRK3Q8IV63 AC078814.3-201ENST00000553036 491 ntBASIC4.45□□□□□ -1.7
VRK3Q8IV63 AC034268.2-201ENST00000571784 482 ntBASIC4.45□□□□□ -1.7
VRK3Q8IV63 KC877982.1-201ENST00000602313 470 ntBASIC4.45□□□□□ -1.7
VRK3Q8IV63 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.45□□□□□ -1.7
VRK3Q8IV63 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.45□□□□□ -1.7
VRK3Q8IV63 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.45□□□□□ -1.7
VRK3Q8IV63 AC068722.2-201ENST00000618734 544 ntBASIC4.45□□□□□ -1.7
VRK3Q8IV63 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.45□□□□□ -1.7
VRK3Q8IV63 MAPK10-286ENST00000641208 8747 ntBASIC4.45□□□□□ -1.7
VRK3Q8IV63 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
VRK3Q8IV63 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
VRK3Q8IV63 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
VRK3Q8IV63 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
VRK3Q8IV63 DHX40P1-201ENST00000588725 1412 ntBASIC4.45□□□□□ -1.7
VRK3Q8IV63 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
VRK3Q8IV63 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.45□□□□□ -1.7
VRK3Q8IV63 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
VRK3Q8IV63 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
VRK3Q8IV63 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.44□□□□□ -1.7
VRK3Q8IV63 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VRK3Q8IV63 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VRK3Q8IV63 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.44□□□□□ -1.7
VRK3Q8IV63 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
VRK3Q8IV63 Y_RNA.157-201ENST00000363638 102 ntBASIC4.44□□□□□ -1.7
VRK3Q8IV63 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
VRK3Q8IV63 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.44□□□□□ -1.7
VRK3Q8IV63 GLULP6-201ENST00000399502 913 ntBASIC4.44□□□□□ -1.7
VRK3Q8IV63 MIR921-201ENST00000401133 56 ntBASIC4.44□□□□□ -1.7
VRK3Q8IV63 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.44□□□□□ -1.7
VRK3Q8IV63 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.44□□□□□ -1.7
VRK3Q8IV63 RAD23BP1-201ENST00000421404 1227 ntBASIC4.44□□□□□ -1.7
VRK3Q8IV63 AC233981.1-201ENST00000423224 461 ntBASIC4.44□□□□□ -1.7
VRK3Q8IV63 AC073069.1-201ENST00000428657 441 ntBASIC4.44□□□□□ -1.7
VRK3Q8IV63 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.44□□□□□ -1.7
VRK3Q8IV63 RPS24P8-201ENST00000431490 402 ntBASIC4.44□□□□□ -1.7
VRK3Q8IV63 RSU1P2-202ENST00000437884 485 ntBASIC4.44□□□□□ -1.7
VRK3Q8IV63 RPL7P54-201ENST00000438336 674 ntBASIC4.44□□□□□ -1.7
VRK3Q8IV63 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.44□□□□□ -1.7
VRK3Q8IV63 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.44□□□□□ -1.7
VRK3Q8IV63 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.44□□□□□ -1.7
VRK3Q8IV63 AC140076.1-201ENST00000449897 361 ntBASIC4.44□□□□□ -1.7
VRK3Q8IV63 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.44□□□□□ -1.7
VRK3Q8IV63 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.44□□□□□ -1.7
VRK3Q8IV63 RPL23AP12-201ENST00000467573 473 ntBASIC4.44□□□□□ -1.7
VRK3Q8IV63 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.44□□□□□ -1.7
VRK3Q8IV63 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.44□□□□□ -1.7
VRK3Q8IV63 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.44□□□□□ -1.7
VRK3Q8IV63 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.44□□□□□ -1.7
VRK3Q8IV63 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.44□□□□□ -1.7
VRK3Q8IV63 AF279873.1-201ENST00000523393 313 ntBASIC4.44□□□□□ -1.7
VRK3Q8IV63 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.44□□□□□ -1.7
VRK3Q8IV63 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.44□□□□□ -1.7
VRK3Q8IV63 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.44□□□□□ -1.7
VRK3Q8IV63 PSMA3P-201ENST00000555485 635 ntBASIC4.44□□□□□ -1.7
VRK3Q8IV63 AC090515.3-201ENST00000560431 315 ntBASIC4.44□□□□□ -1.7
VRK3Q8IV63 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.44□□□□□ -1.7
VRK3Q8IV63 AC037471.2-201ENST00000564941 598 ntBASIC4.44□□□□□ -1.7
VRK3Q8IV63 AC022884.3-201ENST00000579571 248 ntBASIC4.44□□□□□ -1.7
VRK3Q8IV63 AC015917.1-201ENST00000579654 510 ntBASIC4.44□□□□□ -1.7
VRK3Q8IV63 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.44□□□□□ -1.7
VRK3Q8IV63 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.44□□□□□ -1.7
VRK3Q8IV63 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.44□□□□□ -1.7
VRK3Q8IV63 RNU6-87P-201ENST00000607561 108 ntBASIC4.44□□□□□ -1.7
VRK3Q8IV63 uc_338.18-201ENST00000615451 175 ntBASIC4.44□□□□□ -1.7
VRK3Q8IV63 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.44□□□□□ -1.7
VRK3Q8IV63 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.44□□□□□ -1.7
VRK3Q8IV63 CKAP2P1-201ENST00000555477 2049 ntBASIC4.44□□□□□ -1.7
VRK3Q8IV63 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.44□□□□□ -1.7
VRK3Q8IV63 CPHL1P-201ENST00000461341 3407 ntBASIC4.44□□□□□ -1.7
VRK3Q8IV63 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.44□□□□□ -1.7
VRK3Q8IV63 OR11H5P-202ENST00000641612 1325 ntBASIC4.44□□□□□ -1.7
VRK3Q8IV63 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VRK3Q8IV63 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
VRK3Q8IV63 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VRK3Q8IV63 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VRK3Q8IV63 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
VRK3Q8IV63 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VRK3Q8IV63 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
VRK3Q8IV63 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VRK3Q8IV63 ZBTB8OSP1-201ENST00000342688 498 ntBASIC4.43□□□□□ -1.7
VRK3Q8IV63 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
VRK3Q8IV63 Y_RNA.431-201ENST00000384086 102 ntBASIC4.43□□□□□ -1.7
VRK3Q8IV63 RNA5SP332-201ENST00000391063 115 ntBASIC4.43□□□□□ -1.7
VRK3Q8IV63 AL121972.1-201ENST00000402023 252 ntBASIC4.43□□□□□ -1.7
VRK3Q8IV63 RPS4XP8-201ENST00000402039 771 ntBASIC4.43□□□□□ -1.7
VRK3Q8IV63 OR9R1P-201ENST00000412200 877 ntBASIC4.43□□□□□ -1.7
VRK3Q8IV63 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.43□□□□□ -1.7
VRK3Q8IV63 UQCRBP1-201ENST00000421129 336 ntBASIC4.43□□□□□ -1.7
VRK3Q8IV63 RPS12P10-201ENST00000427031 377 ntBASIC4.43□□□□□ -1.7
VRK3Q8IV63 MTCO2P12-201ENST00000427426 682 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms