Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.79□□□□□ -1.48
USP48Q86UV5 AC022790.1-201ENST00000522872 204 ntBASIC5.79□□□□□ -1.48
USP48Q86UV5 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.79□□□□□ -1.48
USP48Q86UV5 AC133555.2-201ENST00000550213 292 ntBASIC5.79□□□□□ -1.48
USP48Q86UV5 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC5.79□□□□□ -1.48
USP48Q86UV5 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.79□□□□□ -1.48
USP48Q86UV5 AC073091.2-201ENST00000603205 907 ntBASIC5.79□□□□□ -1.48
USP48Q86UV5 AC055876.5-201ENST00000605667 259 ntBASIC5.79□□□□□ -1.48
USP48Q86UV5 AC113194.1-201ENST00000606037 500 ntBASIC5.79□□□□□ -1.48
USP48Q86UV5 AC008945.2-201ENST00000606056 604 ntBASIC5.79□□□□□ -1.48
USP48Q86UV5 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.79□□□□□ -1.48
USP48Q86UV5 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.79□□□□□ -1.48
USP48Q86UV5 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
USP48Q86UV5 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
USP48Q86UV5 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
USP48Q86UV5 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
USP48Q86UV5 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.78□□□□□ -1.48
USP48Q86UV5 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
USP48Q86UV5 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
USP48Q86UV5 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
USP48Q86UV5 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
USP48Q86UV5 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
USP48Q86UV5 RNVU1-3-201ENST00000364313 161 ntBASIC5.78□□□□□ -1.48
USP48Q86UV5 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
USP48Q86UV5 RNU6-780P-201ENST00000391030 104 ntBASIC5.78□□□□□ -1.48
USP48Q86UV5 RNA5SP397-201ENST00000391323 118 ntBASIC5.78□□□□□ -1.48
USP48Q86UV5 AL357515.1-201ENST00000402967 542 ntBASIC5.78□□□□□ -1.48
USP48Q86UV5 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
USP48Q86UV5 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC5.78□□□□□ -1.48
USP48Q86UV5 RPL7P57-201ENST00000423238 740 ntBASIC5.78□□□□□ -1.48
USP48Q86UV5 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.78□□□□□ -1.48
USP48Q86UV5 RPS20P1-201ENST00000434853 354 ntBASIC5.78□□□□□ -1.48
USP48Q86UV5 AC127537.2-201ENST00000439258 465 ntBASIC5.78□□□□□ -1.48
USP48Q86UV5 AC108734.1-201ENST00000439549 399 ntBASIC5.78□□□□□ -1.48
USP48Q86UV5 AC132479.1-201ENST00000449160 144 ntBASIC5.78□□□□□ -1.48
USP48Q86UV5 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC5.78□□□□□ -1.48
USP48Q86UV5 RPL23AP41-201ENST00000484754 458 ntBASIC5.78□□□□□ -1.48
USP48Q86UV5 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC5.78□□□□□ -1.48
USP48Q86UV5 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.78□□□□□ -1.48
USP48Q86UV5 MTCO1P35-201ENST00000515270 228 ntBASIC5.78□□□□□ -1.48
USP48Q86UV5 RNU6-507P-201ENST00000516045 100 ntBASIC5.78□□□□□ -1.48
USP48Q86UV5 AK6P1-201ENST00000540219 478 ntBASIC5.78□□□□□ -1.48
USP48Q86UV5 AC084783.1-201ENST00000565846 910 ntBASIC5.78□□□□□ -1.48
USP48Q86UV5 MIR3138-201ENST00000585238 82 ntBASIC5.78□□□□□ -1.48
USP48Q86UV5 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC5.78□□□□□ -1.48
USP48Q86UV5 C8orf59P2-201ENST00000603441 271 ntBASIC5.78□□□□□ -1.48
USP48Q86UV5 AC112230.1-201ENST00000604342 547 ntBASIC5.78□□□□□ -1.48
USP48Q86UV5 AC002553.4-201ENST00000616896 331 ntBASIC5.78□□□□□ -1.48
USP48Q86UV5 OR56B2P-202ENST00000641377 2453 ntBASIC5.78□□□□□ -1.48
USP48Q86UV5 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
USP48Q86UV5 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
USP48Q86UV5 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.78□□□□□ -1.48
USP48Q86UV5 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
USP48Q86UV5 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.78□□□□□ -1.48
USP48Q86UV5 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
USP48Q86UV5 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
USP48Q86UV5 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
USP48Q86UV5 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.77□□□□□ -1.49
USP48Q86UV5 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
USP48Q86UV5 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.77□□□□□ -1.49
USP48Q86UV5 AC008758.3-201ENST00000507003 1829 ntBASIC5.77□□□□□ -1.49
USP48Q86UV5 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
USP48Q86UV5 AC009951.1-201ENST00000623674 2614 ntBASIC5.77□□□□□ -1.49
USP48Q86UV5 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
USP48Q86UV5 RNU6-1085P-201ENST00000363576 107 ntBASIC5.77□□□□□ -1.49
USP48Q86UV5 RNU1-64P-201ENST00000365443 163 ntBASIC5.77□□□□□ -1.49
USP48Q86UV5 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
USP48Q86UV5 FGF7P8-201ENST00000402994 292 ntBASIC5.77□□□□□ -1.49
USP48Q86UV5 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.77□□□□□ -1.49
USP48Q86UV5 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.77□□□□□ -1.49
USP48Q86UV5 AC138393.2-201ENST00000414742 246 ntBASIC5.77□□□□□ -1.49
USP48Q86UV5 UQCRBP1-201ENST00000421129 336 ntBASIC5.77□□□□□ -1.49
USP48Q86UV5 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC5.77□□□□□ -1.49
USP48Q86UV5 CKS1BP6-201ENST00000424932 240 ntBASIC5.77□□□□□ -1.49
USP48Q86UV5 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.77□□□□□ -1.49
USP48Q86UV5 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
USP48Q86UV5 AL049734.2-201ENST00000441066 616 ntBASIC5.77□□□□□ -1.49
USP48Q86UV5 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC5.77□□□□□ -1.49
USP48Q86UV5 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC5.77□□□□□ -1.49
USP48Q86UV5 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.77□□□□□ -1.49
USP48Q86UV5 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.77□□□□□ -1.49
USP48Q86UV5 Y_RNA.702-201ENST00000516843 96 ntBASIC5.77□□□□□ -1.49
USP48Q86UV5 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC5.77□□□□□ -1.49
USP48Q86UV5 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.77□□□□□ -1.49
USP48Q86UV5 AC104383.1-201ENST00000530297 370 ntBASIC5.77□□□□□ -1.49
USP48Q86UV5 AP003034.1-201ENST00000534621 422 ntBASIC5.77□□□□□ -1.49
USP48Q86UV5 AL512310.1-201ENST00000548639 172 ntBASIC5.77□□□□□ -1.49
USP48Q86UV5 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.77□□□□□ -1.49
USP48Q86UV5 AC034105.4-201ENST00000568304 277 ntBASIC5.77□□□□□ -1.49
USP48Q86UV5 AL356432.3-201ENST00000568952 465 ntBASIC5.77□□□□□ -1.49
USP48Q86UV5 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC5.77□□□□□ -1.49
USP48Q86UV5 AC069061.3-201ENST00000582254 823 ntBASIC5.77□□□□□ -1.49
USP48Q86UV5 AC012507.3-201ENST00000603556 477 ntBASIC5.77□□□□□ -1.49
USP48Q86UV5 AP001330.5-201ENST00000607176 411 ntBASIC5.77□□□□□ -1.49
USP48Q86UV5 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.77□□□□□ -1.49
USP48Q86UV5 AL049794.2-201ENST00000616301 365 ntBASIC5.77□□□□□ -1.49
USP48Q86UV5 AC012150.2-201ENST00000621300 544 ntBASIC5.77□□□□□ -1.49
USP48Q86UV5 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.77□□□□□ -1.49
USP48Q86UV5 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
USP48Q86UV5 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms