Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC1.63□□□□□ -2.15
CSMD3Q7Z407 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC1.63□□□□□ -2.15
CSMD3Q7Z407 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CSMD3Q7Z407 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC1.63□□□□□ -2.15
CSMD3Q7Z407 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
CSMD3Q7Z407 RNU6-661P-201ENST00000362409 107 ntBASIC1.63□□□□□ -2.15
CSMD3Q7Z407 RNA5SP383-201ENST00000362934 120 ntBASIC1.63□□□□□ -2.15
CSMD3Q7Z407 RPL23AP16-201ENST00000441715 421 ntBASIC1.63□□□□□ -2.15
CSMD3Q7Z407 AL035551.1-201ENST00000446931 348 ntBASIC1.63□□□□□ -2.15
CSMD3Q7Z407 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC1.63□□□□□ -2.15
CSMD3Q7Z407 AC092851.1-201ENST00000535964 478 ntBASIC1.63□□□□□ -2.15
CSMD3Q7Z407 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CSMD3Q7Z407 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.63□□□□□ -2.15
CSMD3Q7Z407 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
CSMD3Q7Z407 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC1.63□□□□□ -2.15
CSMD3Q7Z407 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
CSMD3Q7Z407 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
CSMD3Q7Z407 MIR708-201ENST00000390708 88 ntBASIC1.63□□□□□ -2.15
CSMD3Q7Z407 BTF3P4-201ENST00000418852 495 ntBASIC1.63□□□□□ -2.15
CSMD3Q7Z407 RNU4ATAC15P-201ENST00000516415 126 ntBASIC1.63□□□□□ -2.15
CSMD3Q7Z407 AC074029.1-201ENST00000552531 1044 ntBASIC1.63□□□□□ -2.15
CSMD3Q7Z407 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CSMD3Q7Z407 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
CSMD3Q7Z407 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
CSMD3Q7Z407 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
CSMD3Q7Z407 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.62□□□□□ -2.15
CSMD3Q7Z407 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC1.62□□□□□ -2.15
CSMD3Q7Z407 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC1.62□□□□□ -2.15
CSMD3Q7Z407 AL590399.6-201ENST00000446396 307 ntBASIC1.62□□□□□ -2.15
CSMD3Q7Z407 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC1.62□□□□□ -2.15
CSMD3Q7Z407 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC1.62□□□□□ -2.15
CSMD3Q7Z407 AC128657.1-201ENST00000549459 145 ntBASIC1.62□□□□□ -2.15
CSMD3Q7Z407 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC1.62□□□□□ -2.15
CSMD3Q7Z407 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CSMD3Q7Z407 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC1.62□□□□□ -2.15
CSMD3Q7Z407 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC1.62□□□□□ -2.15
CSMD3Q7Z407 MTND5P12-201ENST00000502851 1449 ntBASIC1.62□□□□□ -2.15
CSMD3Q7Z407 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
CSMD3Q7Z407 MIR1183-201ENST00000408856 89 ntBASIC1.62□□□□□ -2.15
CSMD3Q7Z407 COX6CP2-201ENST00000444980 225 ntBASIC1.62□□□□□ -2.15
CSMD3Q7Z407 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC1.62□□□□□ -2.15
CSMD3Q7Z407 AC092045.1-201ENST00000495716 1231 ntBASIC1.62□□□□□ -2.15
CSMD3Q7Z407 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.62□□□□□ -2.15
CSMD3Q7Z407 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
CSMD3Q7Z407 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.62□□□□□ -2.15
CSMD3Q7Z407 AC100870.1-201ENST00000522035 505 ntBASIC1.62□□□□□ -2.15
CSMD3Q7Z407 HMGB3P26-201ENST00000560051 582 ntBASIC1.62□□□□□ -2.15
CSMD3Q7Z407 MIR3605-201ENST00000583214 100 ntBASIC1.62□□□□□ -2.15
CSMD3Q7Z407 AC061975.8-201ENST00000587058 721 ntBASIC1.62□□□□□ -2.15
CSMD3Q7Z407 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC1.62□□□□□ -2.15
CSMD3Q7Z407 AL110115.1-201ENST00000614396 364 ntBASIC1.62□□□□□ -2.15
CSMD3Q7Z407 MIR1291-201ENST00000627649 87 ntBASIC1.62□□□□□ -2.15
CSMD3Q7Z407 MIR6733-201ENST00000635723 61 ntBASIC1.62□□□□□ -2.15
CSMD3Q7Z407 AC002546.1-201ENST00000588041 2504 ntBASIC1.62□□□□□ -2.15
CSMD3Q7Z407 RNU1-73P-201ENST00000383971 164 ntBASIC1.62□□□□□ -2.15
CSMD3Q7Z407 ATG3P1-201ENST00000419507 911 ntBASIC1.62□□□□□ -2.15
CSMD3Q7Z407 AC080013.2-201ENST00000460866 323 ntBASIC1.62□□□□□ -2.15
CSMD3Q7Z407 AC122134.1-201ENST00000565664 1104 ntBASIC1.62□□□□□ -2.15
CSMD3Q7Z407 AP001542.2-201ENST00000593141 364 ntBASIC1.62□□□□□ -2.15
CSMD3Q7Z407 AL008729.2-201ENST00000606393 473 ntBASIC1.62□□□□□ -2.15
CSMD3Q7Z407 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.61□□□□□ -2.15
CSMD3Q7Z407 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC1.61□□□□□ -2.15
CSMD3Q7Z407 AL451074.5-201ENST00000415894 435 ntBASIC1.61□□□□□ -2.15
CSMD3Q7Z407 AL606490.7-201ENST00000433136 191 ntBASIC1.61□□□□□ -2.15
CSMD3Q7Z407 RPL23AP58-201ENST00000440453 469 ntBASIC1.61□□□□□ -2.15
CSMD3Q7Z407 AP000893.1-201ENST00000474462 794 ntBASIC1.61□□□□□ -2.15
CSMD3Q7Z407 AC103975.1-201ENST00000482506 483 ntBASIC1.61□□□□□ -2.15
CSMD3Q7Z407 RAD51AP1P1-201ENST00000484195 1001 ntBASIC1.61□□□□□ -2.15
CSMD3Q7Z407 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
CSMD3Q7Z407 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC1.61□□□□□ -2.15
CSMD3Q7Z407 AC008126.1-201ENST00000549019 480 ntBASIC1.61□□□□□ -2.15
CSMD3Q7Z407 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC1.61□□□□□ -2.15
CSMD3Q7Z407 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
CSMD3Q7Z407 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
CSMD3Q7Z407 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CSMD3Q7Z407 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC1.61□□□□□ -2.15
CSMD3Q7Z407 SNORA41-201ENST00000384675 132 ntBASIC1.61□□□□□ -2.15
CSMD3Q7Z407 SNORA26.9-201ENST00000391322 122 ntBASIC1.61□□□□□ -2.15
CSMD3Q7Z407 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.61□□□□□ -2.15
CSMD3Q7Z407 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC1.61□□□□□ -2.15
CSMD3Q7Z407 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC1.61□□□□□ -2.15
CSMD3Q7Z407 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC1.61□□□□□ -2.15
CSMD3Q7Z407 MIR3199-1-201ENST00000582434 88 ntBASIC1.61□□□□□ -2.15
CSMD3Q7Z407 AC110994.2-201ENST00000635481 492 ntBASIC1.61□□□□□ -2.15
CSMD3Q7Z407 AL359715.4-201ENST00000606629 1436 ntBASIC1.61□□□□□ -2.15
CSMD3Q7Z407 AL136964.1-201ENST00000622038 2990 ntBASIC1.61□□□□□ -2.15
CSMD3Q7Z407 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC1.61□□□□□ -2.15
CSMD3Q7Z407 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC1.61□□□□□ -2.15
CSMD3Q7Z407 RNU7-170P-201ENST00000459303 61 ntBASIC1.61□□□□□ -2.15
CSMD3Q7Z407 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.61□□□□□ -2.15
CSMD3Q7Z407 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.61□□□□□ -2.15
CSMD3Q7Z407 SNORA9.3-201ENST00000516383 129 ntBASIC1.61□□□□□ -2.15
CSMD3Q7Z407 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC1.61□□□□□ -2.15
CSMD3Q7Z407 AP000857.1-201ENST00000532151 543 ntBASIC1.61□□□□□ -2.15
CSMD3Q7Z407 snoU13.31-201ENST00000607291 104 ntBASIC1.61□□□□□ -2.15
CSMD3Q7Z407 AC016542.2-201ENST00000624201 619 ntBASIC1.61□□□□□ -2.15
CSMD3Q7Z407 MFSD8-245ENST00000641743 948 ntBASIC1.61□□□□□ -2.15
CSMD3Q7Z407 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
CSMD3Q7Z407 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
CSMD3Q7Z407 AC008432.1-201ENST00000615912 1320 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms