Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AC019226.1-201ENST00000625666 515 ntBASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 EIF2AP4-201ENST00000424793 1781 ntBASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 ASNSP1-201ENST00000518311 1939 ntBASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 AC011978.2-201ENST00000569835 2054 ntBASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 SAGE2P-201ENST00000420011 2126 ntBASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 RNA5SP171-201ENST00000391071 115 ntBASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 PPIAP31-201ENST00000405422 495 ntBASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 SNRPFP1-201ENST00000414761 252 ntBASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 GLRXP1-201ENST00000423261 334 ntBASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 AL451062.2-201ENST00000427515 271 ntBASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 DPPA2P1-201ENST00000428060 556 ntBASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 AC008065.1-201ENST00000428525 348 ntBASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 AC004938.1-201ENST00000438468 308 ntBASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 AC127537.2-201ENST00000439258 465 ntBASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 RBMX2P4-201ENST00000441256 376 ntBASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 RPL23AP43-201ENST00000446445 471 ntBASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 PAXBP1P1-201ENST00000449315 447 ntBASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 AP002812.1-201ENST00000495378 474 ntBASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 HMGB1P21-201ENST00000502313 581 ntBASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 MTND2P33-201ENST00000506452 1031 ntBASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 AC005798.1-201ENST00000513715 387 ntBASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 SNORA67.7-201ENST00000516664 135 ntBASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 RNU6-1178P-201ENST00000516674 107 ntBASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 RN7SKP82-201ENST00000516786 223 ntBASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 OR5AP1P-201ENST00000529730 940 ntBASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 AC024224.1-201ENST00000538284 609 ntBASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 AP001180.3-201ENST00000582221 145 ntBASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 AC008638.3-201ENST00000603341 463 ntBASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 AC015871.2-201ENST00000603605 948 ntBASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 AC113403.1-201ENST00000604910 193 ntBASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 BCRP9-201ENST00000605312 388 ntBASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 COX6CP4-201ENST00000605798 228 ntBASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 AC020634.1-201ENST00000608701 549 ntBASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 AC140113.4-201ENST00000622087 222 ntBASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 AC112484.5-201ENST00000624189 228 ntBASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 SEPT14P19-203ENST00000633205 211 ntBASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 AC093591.3-201ENST00000634516 308 ntBASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 AL356489.2-201ENST00000566968 3528 ntBASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SLC44A4Q53GD3 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 AC019155.1-201ENST00000382242 574 ntBASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 RNU6-809P-201ENST00000384461 107 ntBASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 RN7SKP202-201ENST00000410439 330 ntBASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 RNA5SP104-201ENST00000410989 118 ntBASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 EIF1P1-201ENST00000421436 341 ntBASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 RPL37P21-201ENST00000435890 276 ntBASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 RSU1P2-202ENST00000437884 485 ntBASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 IFNWP4-201ENST00000453148 294 ntBASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 DHFRP3-201ENST00000455595 559 ntBASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 AC106872.3-201ENST00000495104 446 ntBASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 BNIP3P41-201ENST00000503774 571 ntBASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 AC021678.1-201ENST00000505195 936 ntBASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 PGBD4P4-201ENST00000509673 613 ntBASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 AC024589.1-201ENST00000512207 263 ntBASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 HIGD1AP3-201ENST00000515857 278 ntBASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 RNA5SP497-201ENST00000516081 97 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms