Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AP000790.1-201ENST00000528891 737 ntBASIC2.97□□□□□ -1.93
RFX4Q33E94 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.97□□□□□ -1.93
RFX4Q33E94 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.97□□□□□ -1.93
RFX4Q33E94 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.97□□□□□ -1.93
RFX4Q33E94 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.97□□□□□ -1.93
RFX4Q33E94 MIR4666A-201ENST00000580160 79 ntBASIC2.97□□□□□ -1.93
RFX4Q33E94 AC090330.1-201ENST00000588646 764 ntBASIC2.97□□□□□ -1.93
RFX4Q33E94 DNAJC19P3-201ENST00000594491 331 ntBASIC2.97□□□□□ -1.93
RFX4Q33E94 AP002802.2-201ENST00000605877 235 ntBASIC2.97□□□□□ -1.93
RFX4Q33E94 U3.45-201ENST00000607547 219 ntBASIC2.97□□□□□ -1.93
RFX4Q33E94 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC2.97□□□□□ -1.93
RFX4Q33E94 AC004832.5-201ENST00000608677 401 ntBASIC2.97□□□□□ -1.93
RFX4Q33E94 AP000238.1-201ENST00000608759 426 ntBASIC2.97□□□□□ -1.93
RFX4Q33E94 AP005137.2-201ENST00000609238 400 ntBASIC2.97□□□□□ -1.93
RFX4Q33E94 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.97□□□□□ -1.93
RFX4Q33E94 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
RFX4Q33E94 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.97□□□□□ -1.93
RFX4Q33E94 CR392039.5-201ENST00000623201 510 ntBASIC2.97□□□□□ -1.93
RFX4Q33E94 AL356863.1-201ENST00000623378 1080 ntBASIC2.97□□□□□ -1.93
RFX4Q33E94 AC098679.5-201ENST00000624394 571 ntBASIC2.97□□□□□ -1.93
RFX4Q33E94 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.97□□□□□ -1.93
RFX4Q33E94 AL034408.1-202ENST00000636088 415 ntBASIC2.97□□□□□ -1.93
RFX4Q33E94 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RFX4Q33E94 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.97□□□□□ -1.93
RFX4Q33E94 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
RFX4Q33E94 AC004925.1-201ENST00000624256 2706 ntBASIC2.97□□□□□ -1.93
RFX4Q33E94 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.96□□□□□ -1.93
RFX4Q33E94 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.93
RFX4Q33E94 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.96□□□□□ -1.93
RFX4Q33E94 AL355578.1-201ENST00000607405 1328 ntBASIC2.96□□□□□ -1.93
RFX4Q33E94 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
RFX4Q33E94 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.96□□□□□ -1.94
RFX4Q33E94 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.96□□□□□ -1.94
RFX4Q33E94 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RFX4Q33E94 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
RFX4Q33E94 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RFX4Q33E94 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
RFX4Q33E94 SNORD116-23-201ENST00000384645 92 ntBASIC2.96□□□□□ -1.94
RFX4Q33E94 PVALB-202ENST00000404171 422 ntTSL 2 BASIC2.96□□□□□ -1.94
RFX4Q33E94 AL139098.1-201ENST00000407291 389 ntBASIC2.96□□□□□ -1.94
RFX4Q33E94 RPL36AP36-201ENST00000418616 301 ntBASIC2.96□□□□□ -1.94
RFX4Q33E94 AC233981.1-201ENST00000423224 461 ntBASIC2.96□□□□□ -1.94
RFX4Q33E94 MTCYBP32-201ENST00000427945 1084 ntBASIC2.96□□□□□ -1.94
RFX4Q33E94 RPL31P54-201ENST00000429803 370 ntBASIC2.96□□□□□ -1.94
RFX4Q33E94 HSPD1P21-201ENST00000436541 245 ntBASIC2.96□□□□□ -1.94
RFX4Q33E94 AL592437.1-201ENST00000443781 492 ntBASIC2.96□□□□□ -1.94
RFX4Q33E94 RPL21P23-201ENST00000446654 460 ntBASIC2.96□□□□□ -1.94
RFX4Q33E94 GAPDHP27-201ENST00000447427 1020 ntBASIC2.96□□□□□ -1.94
RFX4Q33E94 COX6CP18-201ENST00000448769 222 ntBASIC2.96□□□□□ -1.94
RFX4Q33E94 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC2.96□□□□□ -1.94
RFX4Q33E94 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.96□□□□□ -1.94
RFX4Q33E94 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.96□□□□□ -1.94
RFX4Q33E94 MTCO3P35-201ENST00000485582 781 ntBASIC2.96□□□□□ -1.94
RFX4Q33E94 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.96□□□□□ -1.94
RFX4Q33E94 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.96□□□□□ -1.94
RFX4Q33E94 SUMO2P5-201ENST00000506790 245 ntBASIC2.96□□□□□ -1.94
RFX4Q33E94 AC048346.1-201ENST00000510247 144 ntBASIC2.96□□□□□ -1.94
RFX4Q33E94 RNU6-885P-201ENST00000516607 104 ntBASIC2.96□□□□□ -1.94
RFX4Q33E94 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC2.96□□□□□ -1.94
RFX4Q33E94 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RFX4Q33E94 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.96□□□□□ -1.94
RFX4Q33E94 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.96□□□□□ -1.94
RFX4Q33E94 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.96□□□□□ -1.94
RFX4Q33E94 AC122134.1-202ENST00000569111 1201 ntBASIC2.96□□□□□ -1.94
RFX4Q33E94 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.96□□□□□ -1.94
RFX4Q33E94 AC005412.1-201ENST00000580812 1049 ntBASIC2.96□□□□□ -1.94
RFX4Q33E94 AC022069.1-201ENST00000582910 658 ntBASIC2.96□□□□□ -1.94
RFX4Q33E94 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC2.96□□□□□ -1.94
RFX4Q33E94 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RFX4Q33E94 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC2.96□□□□□ -1.94
RFX4Q33E94 AL390240.1-201ENST00000612950 384 ntBASIC2.96□□□□□ -1.94
RFX4Q33E94 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.96□□□□□ -1.94
RFX4Q33E94 AC243312.2-201ENST00000623340 601 ntBASIC2.96□□□□□ -1.94
RFX4Q33E94 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.96□□□□□ -1.94
RFX4Q33E94 AC244258.1-201ENST00000637553 1071 ntBASIC2.96□□□□□ -1.94
RFX4Q33E94 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RFX4Q33E94 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RFX4Q33E94 ZNF37BP-203ENST00000452306 1352 ntBASIC2.96□□□□□ -1.94
RFX4Q33E94 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC2.96□□□□□ -1.94
RFX4Q33E94 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
RFX4Q33E94 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.96□□□□□ -1.94
RFX4Q33E94 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
RFX4Q33E94 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.95□□□□□ -1.94
RFX4Q33E94 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.95□□□□□ -1.94
RFX4Q33E94 PABPC1P7-201ENST00000413177 1513 ntBASIC2.95□□□□□ -1.94
RFX4Q33E94 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
RFX4Q33E94 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC2.95□□□□□ -1.94
RFX4Q33E94 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.95□□□□□ -1.94
RFX4Q33E94 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.95□□□□□ -1.94
RFX4Q33E94 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
RFX4Q33E94 RPL23AP57-201ENST00000332361 466 ntBASIC2.95□□□□□ -1.94
RFX4Q33E94 RNU6-582P-201ENST00000362989 107 ntBASIC2.95□□□□□ -1.94
RFX4Q33E94 MIR218-2-201ENST00000385006 110 ntBASIC2.95□□□□□ -1.94
RFX4Q33E94 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
RFX4Q33E94 AC025750.1-201ENST00000399891 379 ntBASIC2.95□□□□□ -1.94
RFX4Q33E94 AL355143.1-201ENST00000407101 841 ntBASIC2.95□□□□□ -1.94
RFX4Q33E94 RNA5SP274-201ENST00000410484 108 ntBASIC2.95□□□□□ -1.94
RFX4Q33E94 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.95□□□□□ -1.94
RFX4Q33E94 BTF3P8-201ENST00000414577 526 ntBASIC2.95□□□□□ -1.94
RFX4Q33E94 C1DP1-201ENST00000426049 402 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 160.5 ms