Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 VPS26AP1-201ENST00000483197 979 ntBASIC4.35□□□□□ -1.71
CCDC96Q2M329 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC96Q2M329 HMGB1P22-201ENST00000505315 124 ntBASIC4.35□□□□□ -1.71
CCDC96Q2M329 RNU6-885P-201ENST00000516607 104 ntBASIC4.35□□□□□ -1.71
CCDC96Q2M329 snoZ278.1-201ENST00000517059 112 ntBASIC4.35□□□□□ -1.71
CCDC96Q2M329 SNORA31.20-201ENST00000517111 133 ntBASIC4.35□□□□□ -1.71
CCDC96Q2M329 AC026403.1-201ENST00000518938 295 ntBASIC4.35□□□□□ -1.71
CCDC96Q2M329 RPL12P22-201ENST00000519073 490 ntBASIC4.35□□□□□ -1.71
CCDC96Q2M329 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC96Q2M329 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC96Q2M329 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC96Q2M329 SYF2P1-201ENST00000550658 413 ntBASIC4.35□□□□□ -1.71
CCDC96Q2M329 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC96Q2M329 MTCYBP27-201ENST00000555160 670 ntBASIC4.35□□□□□ -1.71
CCDC96Q2M329 MTND3P12-201ENST00000559068 328 ntBASIC4.35□□□□□ -1.71
CCDC96Q2M329 MTND3P13-201ENST00000574391 343 ntBASIC4.35□□□□□ -1.71
CCDC96Q2M329 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC96Q2M329 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC96Q2M329 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC96Q2M329 SNORD84-203ENST00000584275 78 ntBASIC4.35□□□□□ -1.71
CCDC96Q2M329 AC015688.2-201ENST00000584523 262 ntBASIC4.35□□□□□ -1.71
CCDC96Q2M329 AC016877.3-201ENST00000606778 504 ntBASIC4.35□□□□□ -1.71
CCDC96Q2M329 AP000238.1-201ENST00000608759 426 ntBASIC4.35□□□□□ -1.71
CCDC96Q2M329 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC96Q2M329 MIR486-1-201ENST00000612171 68 ntBASIC4.35□□□□□ -1.71
CCDC96Q2M329 AC119674.1-207ENST00000641355 633 ntBASIC4.35□□□□□ -1.71
CCDC96Q2M329 AL672296.1-201ENST00000427780 2158 ntBASIC4.35□□□□□ -1.71
CCDC96Q2M329 AC021755.1-201ENST00000559747 1447 ntBASIC4.35□□□□□ -1.71
CCDC96Q2M329 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC96Q2M329 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC96Q2M329 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC96Q2M329 MFSD8-236ENST00000641509 4050 ntBASIC4.35□□□□□ -1.71
CCDC96Q2M329 ZNF826P-207ENST00000622273 1910 ntBASIC4.34□□□□□ -1.71
CCDC96Q2M329 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC96Q2M329 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC96Q2M329 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC96Q2M329 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC96Q2M329 MIR449B-201ENST00000384995 97 ntBASIC4.34□□□□□ -1.71
CCDC96Q2M329 SNORA40.2-201ENST00000390847 128 ntBASIC4.34□□□□□ -1.71
CCDC96Q2M329 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC96Q2M329 RNA5SP129-201ENST00000410276 118 ntBASIC4.34□□□□□ -1.71
CCDC96Q2M329 RNU6-575P-201ENST00000411326 105 ntBASIC4.34□□□□□ -1.71
CCDC96Q2M329 FCF1P2-201ENST00000415284 583 ntBASIC4.34□□□□□ -1.71
CCDC96Q2M329 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC96Q2M329 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.34□□□□□ -1.71
CCDC96Q2M329 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC96Q2M329 AC091286.1-201ENST00000431233 461 ntBASIC4.34□□□□□ -1.71
CCDC96Q2M329 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC96Q2M329 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC96Q2M329 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC96Q2M329 HMGN2P16-201ENST00000456802 261 ntBASIC4.34□□□□□ -1.71
CCDC96Q2M329 RPS20P24-201ENST00000457473 361 ntBASIC4.34□□□□□ -1.71
CCDC96Q2M329 AC034236.1-201ENST00000469891 373 ntBASIC4.34□□□□□ -1.71
CCDC96Q2M329 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC96Q2M329 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC96Q2M329 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.34□□□□□ -1.71
CCDC96Q2M329 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC96Q2M329 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC96Q2M329 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC96Q2M329 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC96Q2M329 UBTFL10-201ENST00000528532 562 ntBASIC4.34□□□□□ -1.71
CCDC96Q2M329 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC96Q2M329 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC96Q2M329 AC023813.2-201ENST00000564321 469 ntBASIC4.34□□□□□ -1.71
CCDC96Q2M329 MIR4474-201ENST00000579189 78 ntBASIC4.34□□□□□ -1.71
CCDC96Q2M329 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC96Q2M329 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC96Q2M329 VN1R83P-201ENST00000595685 445 ntBASIC4.34□□□□□ -1.71
CCDC96Q2M329 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.34□□□□□ -1.71
CCDC96Q2M329 NIFKP6-201ENST00000598115 845 ntBASIC4.34□□□□□ -1.71
CCDC96Q2M329 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC96Q2M329 AP003485.2-201ENST00000623636 610 ntBASIC4.34□□□□□ -1.71
CCDC96Q2M329 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.34□□□□□ -1.71
CCDC96Q2M329 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC96Q2M329 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CCDC96Q2M329 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC96Q2M329 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC96Q2M329 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC96Q2M329 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC96Q2M329 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC96Q2M329 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC96Q2M329 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC96Q2M329 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC96Q2M329 RPL7P26-201ENST00000333817 754 ntBASIC4.33□□□□□ -1.72
CCDC96Q2M329 SNORA71.3-201ENST00000362582 128 ntBASIC4.33□□□□□ -1.72
CCDC96Q2M329 RNU6-1066P-201ENST00000363573 105 ntBASIC4.33□□□□□ -1.72
CCDC96Q2M329 RNA5SP322-201ENST00000363617 119 ntBASIC4.33□□□□□ -1.72
CCDC96Q2M329 RNA5SP51-201ENST00000364750 119 ntBASIC4.33□□□□□ -1.72
CCDC96Q2M329 RNA5SP424-201ENST00000390988 115 ntBASIC4.33□□□□□ -1.72
CCDC96Q2M329 ERHP2-201ENST00000402323 299 ntBASIC4.33□□□□□ -1.72
CCDC96Q2M329 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC96Q2M329 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC96Q2M329 FNDC3CP-201ENST00000420795 1155 ntBASIC4.33□□□□□ -1.72
CCDC96Q2M329 RPF2P1-201ENST00000424137 906 ntBASIC4.33□□□□□ -1.72
CCDC96Q2M329 RAC1P8-201ENST00000427086 527 ntBASIC4.33□□□□□ -1.72
CCDC96Q2M329 AL050321.1-201ENST00000432363 400 ntBASIC4.33□□□□□ -1.72
CCDC96Q2M329 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC96Q2M329 AC127537.2-201ENST00000439258 465 ntBASIC4.33□□□□□ -1.72
CCDC96Q2M329 RPL7P52-201ENST00000449200 742 ntBASIC4.33□□□□□ -1.72
CCDC96Q2M329 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms