Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 NANOGP10-201ENST00000453325 895 ntBASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 AC116562.3-201ENST00000506136 177 ntBASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 AC068587.5-201ENST00000528506 175 ntBASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 PMS2P3-207ENST00000529061 717 ntBASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 AC027667.1-201ENST00000545814 304 ntBASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 AC127381.1-201ENST00000555979 939 ntBASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 AC011447.4-201ENST00000587562 111 ntBASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 AC093799.2-201ENST00000610062 578 ntBASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 AC130454.1-201ENST00000622948 401 ntBASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 AC093909.5-201ENST00000621839 1799 ntBASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 AC130304.1-201ENST00000622942 2385 ntBASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 RNU6-22P-201ENST00000384355 107 ntBASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 MIR23B-201ENST00000384832 97 ntBASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 RNU2-50P-201ENST00000410494 143 ntBASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 AC011933.1-201ENST00000413334 321 ntBASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 AC012065.2-201ENST00000421295 375 ntBASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 HIGD1AP11-201ENST00000438361 280 ntBASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 RPS7P5-201ENST00000441482 581 ntBASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 MTCO3P8-201ENST00000453691 755 ntBASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 AC112187.1-201ENST00000455837 479 ntBASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 AL035690.1-201ENST00000490892 383 ntBASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 FTH1P8-201ENST00000498161 514 ntBASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 AC083829.1-201ENST00000503756 657 ntBASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 AC107393.1-201ENST00000512403 346 ntBASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 RNU6-479P-201ENST00000516348 105 ntBASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 AC100784.1-201ENST00000522790 310 ntBASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 AP006587.4-201ENST00000526053 529 ntBASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 DEFB109D-201ENST00000529497 240 ntBASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 CBX3P4-201ENST00000538909 354 ntBASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 BNIP3P5-201ENST00000562290 498 ntBASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 AC109583.2-201ENST00000617367 129 ntBASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 MIR7703-201ENST00000620784 77 ntBASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC5.4□□□□□ -1.54
RSPO4Q2I0M5 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
RSPO4Q2I0M5 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.4□□□□□ -1.55
RSPO4Q2I0M5 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RSPO4Q2I0M5 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RSPO4Q2I0M5 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RSPO4Q2I0M5 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RSPO4Q2I0M5 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RSPO4Q2I0M5 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC5.4□□□□□ -1.55
RSPO4Q2I0M5 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RSPO4Q2I0M5 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.4□□□□□ -1.55
RSPO4Q2I0M5 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 DOCK11P1-201ENST00000553480 5932 ntBASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 MFSD8-216ENST00000641147 4009 ntBASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 RN7SKP227-201ENST00000364445 330 ntBASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 Y_RNA.314-201ENST00000365114 102 ntBASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 RNU6-532P-201ENST00000384318 107 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms