Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 AC005832.3-201ENST00000537929 631 ntBASIC3.43□□□□□ -1.86
SIX1Q15475 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SIX1Q15475 NBEAP1-201ENST00000554452 979 ntBASIC3.43□□□□□ -1.86
SIX1Q15475 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.43□□□□□ -1.86
SIX1Q15475 AC090888.2-201ENST00000559765 1144 ntBASIC3.43□□□□□ -1.86
SIX1Q15475 GTF2IP8-201ENST00000560687 584 ntBASIC3.43□□□□□ -1.86
SIX1Q15475 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.43□□□□□ -1.86
SIX1Q15475 AC093519.1-201ENST00000566109 298 ntBASIC3.43□□□□□ -1.86
SIX1Q15475 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.43□□□□□ -1.86
SIX1Q15475 BNIP3P26-201ENST00000600827 554 ntBASIC3.43□□□□□ -1.86
SIX1Q15475 CLIC4P2-201ENST00000601934 717 ntBASIC3.43□□□□□ -1.86
SIX1Q15475 AL390838.2-201ENST00000602394 274 ntBASIC3.43□□□□□ -1.86
SIX1Q15475 U3.45-201ENST00000607547 219 ntBASIC3.43□□□□□ -1.86
SIX1Q15475 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.43□□□□□ -1.86
SIX1Q15475 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.43□□□□□ -1.86
SIX1Q15475 AL356321.1-201ENST00000621360 228 ntBASIC3.43□□□□□ -1.86
SIX1Q15475 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
SIX1Q15475 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.43□□□□□ -1.86
SIX1Q15475 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SIX1Q15475 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SIX1Q15475 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SIX1Q15475 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SIX1Q15475 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.43□□□□□ -1.86
SIX1Q15475 AC109315.1-201ENST00000584143 1347 ntBASIC3.43□□□□□ -1.86
SIX1Q15475 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
SIX1Q15475 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SIX1Q15475 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SIX1Q15475 MTND5P31-201ENST00000419366 1374 ntBASIC3.42□□□□□ -1.86
SIX1Q15475 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
SIX1Q15475 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SIX1Q15475 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.42□□□□□ -1.86
SIX1Q15475 MIR7-3-201ENST00000384898 110 ntBASIC3.42□□□□□ -1.86
SIX1Q15475 AL121978.1-201ENST00000402778 359 ntBASIC3.42□□□□□ -1.86
SIX1Q15475 RNA5SP80-201ENST00000410475 111 ntBASIC3.42□□□□□ -1.86
SIX1Q15475 AL136133.1-201ENST00000413694 376 ntBASIC3.42□□□□□ -1.86
SIX1Q15475 LUZP4P1-201ENST00000415420 344 ntBASIC3.42□□□□□ -1.86
SIX1Q15475 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.42□□□□□ -1.86
SIX1Q15475 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.42□□□□□ -1.86
SIX1Q15475 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.42□□□□□ -1.86
SIX1Q15475 AC010099.3-201ENST00000423896 409 ntBASIC3.42□□□□□ -1.86
SIX1Q15475 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.42□□□□□ -1.86
SIX1Q15475 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.42□□□□□ -1.86
SIX1Q15475 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.42□□□□□ -1.86
SIX1Q15475 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.42□□□□□ -1.86
SIX1Q15475 FGF7P5-201ENST00000441829 291 ntBASIC3.42□□□□□ -1.86
SIX1Q15475 MTCO2P25-201ENST00000447065 681 ntBASIC3.42□□□□□ -1.86
SIX1Q15475 NDUFA5P7-201ENST00000452914 242 ntBASIC3.42□□□□□ -1.86
SIX1Q15475 HMGN3P1-201ENST00000453847 193 ntBASIC3.42□□□□□ -1.86
SIX1Q15475 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.42□□□□□ -1.86
SIX1Q15475 MTCO2P6-201ENST00000463134 685 ntBASIC3.42□□□□□ -1.86
SIX1Q15475 AP000893.1-201ENST00000474462 794 ntBASIC3.42□□□□□ -1.86
SIX1Q15475 AC106707.2-201ENST00000484182 374 ntBASIC3.42□□□□□ -1.86
SIX1Q15475 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.42□□□□□ -1.86
SIX1Q15475 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.42□□□□□ -1.86
SIX1Q15475 AC114967.1-201ENST00000504890 259 ntBASIC3.42□□□□□ -1.86
SIX1Q15475 MTATP6P22-201ENST00000507369 598 ntBASIC3.42□□□□□ -1.86
SIX1Q15475 AC110792.2-201ENST00000510278 224 ntBASIC3.42□□□□□ -1.86
SIX1Q15475 USP9YP5-201ENST00000511770 630 ntBASIC3.42□□□□□ -1.86
SIX1Q15475 RNU5A-4P-201ENST00000516588 111 ntBASIC3.42□□□□□ -1.86
SIX1Q15475 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.42□□□□□ -1.86
SIX1Q15475 DUXAP5-201ENST00000529668 529 ntBASIC3.42□□□□□ -1.86
SIX1Q15475 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.42□□□□□ -1.86
SIX1Q15475 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.42□□□□□ -1.86
SIX1Q15475 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.42□□□□□ -1.86
SIX1Q15475 CBX3P5-201ENST00000552017 521 ntBASIC3.42□□□□□ -1.86
SIX1Q15475 AC074029.1-201ENST00000552531 1044 ntBASIC3.42□□□□□ -1.86
SIX1Q15475 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.42□□□□□ -1.86
SIX1Q15475 MTCYBP27-201ENST00000555160 670 ntBASIC3.42□□□□□ -1.86
SIX1Q15475 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.42□□□□□ -1.86
SIX1Q15475 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.42□□□□□ -1.86
SIX1Q15475 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.42□□□□□ -1.86
SIX1Q15475 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.42□□□□□ -1.86
SIX1Q15475 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.42□□□□□ -1.86
SIX1Q15475 VN1R78P-201ENST00000597393 564 ntBASIC3.42□□□□□ -1.86
SIX1Q15475 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.42□□□□□ -1.86
SIX1Q15475 AC006557.5-201ENST00000603126 811 ntBASIC3.42□□□□□ -1.86
SIX1Q15475 AC024220.1-201ENST00000603675 484 ntBASIC3.42□□□□□ -1.86
SIX1Q15475 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.42□□□□□ -1.86
SIX1Q15475 MIR7851-201ENST00000610611 160 ntBASIC3.42□□□□□ -1.86
SIX1Q15475 uc_338.1-201ENST00000612113 180 ntBASIC3.42□□□□□ -1.86
SIX1Q15475 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.42□□□□□ -1.86
SIX1Q15475 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SIX1Q15475 AC026634.1-201ENST00000634369 198 ntBASIC3.42□□□□□ -1.86
SIX1Q15475 AL034408.1-202ENST00000636088 415 ntBASIC3.42□□□□□ -1.86
SIX1Q15475 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SIX1Q15475 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.42□□□□□ -1.86
SIX1Q15475 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
SIX1Q15475 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SIX1Q15475 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
SIX1Q15475 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.41□□□□□ -1.86
SIX1Q15475 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
SIX1Q15475 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.41□□□□□ -1.86
SIX1Q15475 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SIX1Q15475 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SIX1Q15475 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SIX1Q15475 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
SIX1Q15475 XIAPP3-201ENST00000312918 795 ntBASIC3.41□□□□□ -1.86
SIX1Q15475 RNU5D-1-201ENST00000363299 116 ntBASIC3.41□□□□□ -1.86
SIX1Q15475 U3.11-201ENST00000364476 212 ntBASIC3.41□□□□□ -1.86
SIX1Q15475 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms