Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 AC053481.4-201ENST00000583164 216 ntBASIC3.07□□□□□ -1.92
RAB40BQ12829 VN1R83P-201ENST00000595685 445 ntBASIC3.07□□□□□ -1.92
RAB40BQ12829 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.07□□□□□ -1.92
RAB40BQ12829 AC055876.5-201ENST00000605667 259 ntBASIC3.07□□□□□ -1.92
RAB40BQ12829 AC011816.2-201ENST00000607089 556 ntBASIC3.07□□□□□ -1.92
RAB40BQ12829 AC090425.2-201ENST00000608818 501 ntBASIC3.07□□□□□ -1.92
RAB40BQ12829 AL121652.1-201ENST00000608851 448 ntBASIC3.07□□□□□ -1.92
RAB40BQ12829 AC024257.5-201ENST00000612739 531 ntBASIC3.07□□□□□ -1.92
RAB40BQ12829 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.07□□□□□ -1.92
RAB40BQ12829 AC092650.2-201ENST00000619984 902 ntBASIC3.07□□□□□ -1.92
RAB40BQ12829 AC091925.2-201ENST00000625059 256 ntBASIC3.07□□□□□ -1.92
RAB40BQ12829 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RAB40BQ12829 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.07□□□□□ -1.92
RAB40BQ12829 ZNF542P-204ENST00000482727 1305 ntBASIC3.07□□□□□ -1.92
RAB40BQ12829 AC107982.1-201ENST00000507171 1300 ntBASIC3.07□□□□□ -1.92
RAB40BQ12829 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.07□□□□□ -1.92
RAB40BQ12829 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RAB40BQ12829 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RAB40BQ12829 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.07□□□□□ -1.92
RAB40BQ12829 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
RAB40BQ12829 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
RAB40BQ12829 RPL7P26-201ENST00000333817 754 ntBASIC3.06□□□□□ -1.92
RAB40BQ12829 SRP72P2-201ENST00000344851 1979 ntBASIC3.06□□□□□ -1.92
RAB40BQ12829 RNA5SP515-201ENST00000364570 118 ntBASIC3.06□□□□□ -1.92
RAB40BQ12829 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
RAB40BQ12829 SNRPEP2-201ENST00000397592 279 ntBASIC3.06□□□□□ -1.92
RAB40BQ12829 RNU2-15P-201ENST00000410692 191 ntBASIC3.06□□□□□ -1.92
RAB40BQ12829 Z99755.1-201ENST00000414048 380 ntBASIC3.06□□□□□ -1.92
RAB40BQ12829 AL354692.1-201ENST00000423044 315 ntBASIC3.06□□□□□ -1.92
RAB40BQ12829 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RAB40BQ12829 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.06□□□□□ -1.92
RAB40BQ12829 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.06□□□□□ -1.92
RAB40BQ12829 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.06□□□□□ -1.92
RAB40BQ12829 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.06□□□□□ -1.92
RAB40BQ12829 RRM2P4-201ENST00000441721 562 ntBASIC3.06□□□□□ -1.92
RAB40BQ12829 AL358794.1-201ENST00000445689 381 ntBASIC3.06□□□□□ -1.92
RAB40BQ12829 RPL7P52-201ENST00000449200 742 ntBASIC3.06□□□□□ -1.92
RAB40BQ12829 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.06□□□□□ -1.92
RAB40BQ12829 CFTRP1-201ENST00000456646 183 ntBASIC3.06□□□□□ -1.92
RAB40BQ12829 snoU13.4-201ENST00000458916 104 ntBASIC3.06□□□□□ -1.92
RAB40BQ12829 HMGB1P25-201ENST00000468402 607 ntBASIC3.06□□□□□ -1.92
RAB40BQ12829 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.06□□□□□ -1.92
RAB40BQ12829 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.06□□□□□ -1.92
RAB40BQ12829 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.06□□□□□ -1.92
RAB40BQ12829 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.06□□□□□ -1.92
RAB40BQ12829 AC113347.3-201ENST00000509113 148 ntBASIC3.06□□□□□ -1.92
RAB40BQ12829 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RAB40BQ12829 AC026402.1-201ENST00000513642 170 ntBASIC3.06□□□□□ -1.92
RAB40BQ12829 RNU6-1225P-201ENST00000516336 65 ntBASIC3.06□□□□□ -1.92
RAB40BQ12829 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.06□□□□□ -1.92
RAB40BQ12829 IGKV2-23-201ENST00000518729 323 ntBASIC3.06□□□□□ -1.92
RAB40BQ12829 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.06□□□□□ -1.92
RAB40BQ12829 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.06□□□□□ -1.92
RAB40BQ12829 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.06□□□□□ -1.92
RAB40BQ12829 SYF2P1-201ENST00000550658 413 ntBASIC3.06□□□□□ -1.92
RAB40BQ12829 AC084824.1-201ENST00000550917 1005 ntBASIC3.06□□□□□ -1.92
RAB40BQ12829 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.06□□□□□ -1.92
RAB40BQ12829 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.06□□□□□ -1.92
RAB40BQ12829 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.06□□□□□ -1.92
RAB40BQ12829 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.06□□□□□ -1.92
RAB40BQ12829 MTND3P13-201ENST00000574391 343 ntBASIC3.06□□□□□ -1.92
RAB40BQ12829 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.06□□□□□ -1.92
RAB40BQ12829 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.06□□□□□ -1.92
RAB40BQ12829 AC093227.2-201ENST00000589357 285 ntBASIC3.06□□□□□ -1.92
RAB40BQ12829 BNIP3P24-201ENST00000593398 557 ntBASIC3.06□□□□□ -1.92
RAB40BQ12829 RPL23AP92-201ENST00000603609 255 ntBASIC3.06□□□□□ -1.92
RAB40BQ12829 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
RAB40BQ12829 AL158163.2-201ENST00000619110 700 ntBASIC3.06□□□□□ -1.92
RAB40BQ12829 AC073348.1-201ENST00000623002 331 ntBASIC3.06□□□□□ -1.92
RAB40BQ12829 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.06□□□□□ -1.92
RAB40BQ12829 AL049780.3-201ENST00000624612 1583 ntBASIC3.06□□□□□ -1.92
RAB40BQ12829 U6.101-201ENST00000637707 76 ntBASIC3.06□□□□□ -1.92
RAB40BQ12829 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.06□□□□□ -1.92
RAB40BQ12829 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
RAB40BQ12829 AC116096.1-201ENST00000566804 2314 ntBASIC3.05□□□□□ -1.92
RAB40BQ12829 AC004972.1-201ENST00000623934 2209 ntBASIC3.05□□□□□ -1.92
RAB40BQ12829 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.05□□□□□ -1.92
RAB40BQ12829 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
RAB40BQ12829 AC109315.1-201ENST00000584143 1347 ntBASIC3.05□□□□□ -1.92
RAB40BQ12829 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
RAB40BQ12829 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RAB40BQ12829 MIR148B-201ENST00000362252 99 ntBASIC3.05□□□□□ -1.92
RAB40BQ12829 RNA5SP479-201ENST00000364858 117 ntBASIC3.05□□□□□ -1.92
RAB40BQ12829 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
RAB40BQ12829 SNORD116-12-201ENST00000384468 92 ntBASIC3.05□□□□□ -1.92
RAB40BQ12829 RNU6-878P-201ENST00000384578 110 ntBASIC3.05□□□□□ -1.92
RAB40BQ12829 MIR122-201ENST00000385044 85 ntBASIC3.05□□□□□ -1.92
RAB40BQ12829 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.05□□□□□ -1.92
RAB40BQ12829 RNA5SP129-201ENST00000410276 118 ntBASIC3.05□□□□□ -1.92
RAB40BQ12829 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.05□□□□□ -1.92
RAB40BQ12829 AC092447.6-201ENST00000414578 210 ntBASIC3.05□□□□□ -1.92
RAB40BQ12829 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.05□□□□□ -1.92
RAB40BQ12829 AC006960.1-201ENST00000419980 153 ntBASIC3.05□□□□□ -1.92
RAB40BQ12829 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.05□□□□□ -1.92
RAB40BQ12829 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
RAB40BQ12829 RPL7P44-201ENST00000424827 742 ntBASIC3.05□□□□□ -1.92
RAB40BQ12829 AC012497.1-201ENST00000429392 575 ntBASIC3.05□□□□□ -1.92
RAB40BQ12829 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.05□□□□□ -1.92
RAB40BQ12829 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.05□□□□□ -1.92
RAB40BQ12829 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 145.4 ms