Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.2□□□□□ -1.9
SMARCB1Q12824 AF117829.1-206ENST00000621883 3802 ntBASIC3.2□□□□□ -1.9
SMARCB1Q12824 AC004972.1-201ENST00000623934 2209 ntBASIC3.2□□□□□ -1.9
SMARCB1Q12824 MTCO1P4-201ENST00000520516 1409 ntBASIC3.2□□□□□ -1.9
SMARCB1Q12824 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SMARCB1Q12824 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SMARCB1Q12824 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SMARCB1Q12824 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.2□□□□□ -1.9
SMARCB1Q12824 RPL7P26-201ENST00000333817 754 ntBASIC3.2□□□□□ -1.9
SMARCB1Q12824 RNU6-609P-201ENST00000365459 107 ntBASIC3.2□□□□□ -1.9
SMARCB1Q12824 AL031121.1-201ENST00000406553 254 ntBASIC3.2□□□□□ -1.9
SMARCB1Q12824 AC092745.2-202ENST00000411880 369 ntBASIC3.2□□□□□ -1.9
SMARCB1Q12824 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.2□□□□□ -1.9
SMARCB1Q12824 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.2□□□□□ -1.9
SMARCB1Q12824 AC022018.1-201ENST00000430685 241 ntBASIC3.2□□□□□ -1.9
SMARCB1Q12824 AL590103.1-201ENST00000434488 307 ntBASIC3.2□□□□□ -1.9
SMARCB1Q12824 HMGB1P45-201ENST00000435986 653 ntBASIC3.2□□□□□ -1.9
SMARCB1Q12824 FABP5P3-201ENST00000437960 408 ntBASIC3.2□□□□□ -1.9
SMARCB1Q12824 AP000949.1-201ENST00000438328 629 ntBASIC3.2□□□□□ -1.9
SMARCB1Q12824 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.2□□□□□ -1.9
SMARCB1Q12824 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.2□□□□□ -1.9
SMARCB1Q12824 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.2□□□□□ -1.9
SMARCB1Q12824 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.2□□□□□ -1.9
SMARCB1Q12824 AL035407.2-201ENST00000454090 378 ntBASIC3.2□□□□□ -1.9
SMARCB1Q12824 RPS15AP1-201ENST00000457423 391 ntBASIC3.2□□□□□ -1.9
SMARCB1Q12824 RN7SL283P-201ENST00000489055 303 ntBASIC3.2□□□□□ -1.9
SMARCB1Q12824 AC080014.1-201ENST00000496877 1201 ntBASIC3.2□□□□□ -1.9
SMARCB1Q12824 MTCO2P9-201ENST00000503214 694 ntBASIC3.2□□□□□ -1.9
SMARCB1Q12824 AC114967.1-201ENST00000504890 259 ntBASIC3.2□□□□□ -1.9
SMARCB1Q12824 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.2□□□□□ -1.9
SMARCB1Q12824 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.2□□□□□ -1.9
SMARCB1Q12824 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.2□□□□□ -1.9
SMARCB1Q12824 AP001207.2-201ENST00000519490 539 ntBASIC3.2□□□□□ -1.9
SMARCB1Q12824 AC068657.1-201ENST00000520807 306 ntBASIC3.2□□□□□ -1.9
SMARCB1Q12824 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.2□□□□□ -1.9
SMARCB1Q12824 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.2□□□□□ -1.9
SMARCB1Q12824 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.2□□□□□ -1.9
SMARCB1Q12824 EIF4BP1-201ENST00000554881 351 ntBASIC3.2□□□□□ -1.9
SMARCB1Q12824 AC078899.3-201ENST00000599065 212 ntBASIC3.2□□□□□ -1.9
SMARCB1Q12824 MIR6864-201ENST00000617935 70 ntBASIC3.2□□□□□ -1.9
SMARCB1Q12824 AL590240.3-201ENST00000621416 943 ntBASIC3.2□□□□□ -1.9
SMARCB1Q12824 AP003400.6-201ENST00000624698 740 ntBASIC3.2□□□□□ -1.9
SMARCB1Q12824 XPOTP1-201ENST00000443317 2398 ntBASIC3.2□□□□□ -1.9
SMARCB1Q12824 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.2□□□□□ -1.9
SMARCB1Q12824 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.2□□□□□ -1.9
SMARCB1Q12824 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SMARCB1Q12824 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SMARCB1Q12824 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SMARCB1Q12824 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SMARCB1Q12824 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.19□□□□□ -1.9
SMARCB1Q12824 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SMARCB1Q12824 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
SMARCB1Q12824 Y_RNA.111-201ENST00000363248 100 ntBASIC3.19□□□□□ -1.9
SMARCB1Q12824 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.19□□□□□ -1.9
SMARCB1Q12824 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SMARCB1Q12824 RNU2-21P-201ENST00000410368 188 ntBASIC3.19□□□□□ -1.9
SMARCB1Q12824 RNA5SP274-201ENST00000410484 108 ntBASIC3.19□□□□□ -1.9
SMARCB1Q12824 AC006960.1-201ENST00000419980 153 ntBASIC3.19□□□□□ -1.9
SMARCB1Q12824 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.19□□□□□ -1.9
SMARCB1Q12824 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SMARCB1Q12824 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SMARCB1Q12824 UBE2V1P6-201ENST00000430840 422 ntBASIC3.19□□□□□ -1.9
SMARCB1Q12824 AC011242.1-201ENST00000433596 1158 ntBASIC3.19□□□□□ -1.9
SMARCB1Q12824 RPL21P112-201ENST00000434403 463 ntBASIC3.19□□□□□ -1.9
SMARCB1Q12824 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.19□□□□□ -1.9
SMARCB1Q12824 AL158053.1-201ENST00000441503 453 ntBASIC3.19□□□□□ -1.9
SMARCB1Q12824 AL096829.2-201ENST00000446582 742 ntBASIC3.19□□□□□ -1.9
SMARCB1Q12824 AC093392.2-201ENST00000450682 337 ntBASIC3.19□□□□□ -1.9
SMARCB1Q12824 AC117440.1-201ENST00000474107 571 ntBASIC3.19□□□□□ -1.9
SMARCB1Q12824 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.19□□□□□ -1.9
SMARCB1Q12824 AC126121.1-201ENST00000482313 553 ntBASIC3.19□□□□□ -1.9
SMARCB1Q12824 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.19□□□□□ -1.9
SMARCB1Q12824 PRELID3BP6-201ENST00000503839 571 ntBASIC3.19□□□□□ -1.9
SMARCB1Q12824 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.19□□□□□ -1.9
SMARCB1Q12824 SCARNA13-201ENST00000516672 275 ntBASIC3.19□□□□□ -1.9
SMARCB1Q12824 SNORA31.26-201ENST00000517250 137 ntBASIC3.19□□□□□ -1.9
SMARCB1Q12824 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.19□□□□□ -1.9
SMARCB1Q12824 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
SMARCB1Q12824 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.19□□□□□ -1.9
SMARCB1Q12824 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.19□□□□□ -1.9
SMARCB1Q12824 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.19□□□□□ -1.9
SMARCB1Q12824 OR6C73P-201ENST00000546432 358 ntBASIC3.19□□□□□ -1.9
SMARCB1Q12824 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.19□□□□□ -1.9
SMARCB1Q12824 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.19□□□□□ -1.9
SMARCB1Q12824 AC006504.3-201ENST00000586818 523 ntBASIC3.19□□□□□ -1.9
SMARCB1Q12824 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.19□□□□□ -1.9
SMARCB1Q12824 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.19□□□□□ -1.9
SMARCB1Q12824 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SMARCB1Q12824 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.19□□□□□ -1.9
SMARCB1Q12824 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SMARCB1Q12824 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SMARCB1Q12824 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.18□□□□□ -1.9
SMARCB1Q12824 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SMARCB1Q12824 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.18□□□□□ -1.9
SMARCB1Q12824 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.18□□□□□ -1.9
SMARCB1Q12824 AC116096.1-201ENST00000566804 2314 ntBASIC3.18□□□□□ -1.9
SMARCB1Q12824 MTND4P8-201ENST00000514997 1362 ntBASIC3.18□□□□□ -1.9
SMARCB1Q12824 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.18□□□□□ -1.9
SMARCB1Q12824 SNORA51.2-201ENST00000364595 132 ntBASIC3.18□□□□□ -1.9
SMARCB1Q12824 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms