Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 AC012150.2-201ENST00000621300 544 ntBASIC5.27□□□□□ -1.57
SSRP1Q08945 AC091905.2-201ENST00000623143 306 ntBASIC5.27□□□□□ -1.57
SSRP1Q08945 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSRP1Q08945 LRRC77P-213ENST00000637727 880 ntBASIC5.27□□□□□ -1.57
SSRP1Q08945 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSRP1Q08945 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SSRP1Q08945 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
SSRP1Q08945 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SSRP1Q08945 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SSRP1Q08945 EOGT-210ENST00000615922 1931 ntBASIC5.27□□□□□ -1.57
SSRP1Q08945 EIF2AP4-201ENST00000424793 1781 ntBASIC5.27□□□□□ -1.57
SSRP1Q08945 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SSRP1Q08945 SNORD113.2-201ENST00000364166 89 ntBASIC5.26□□□□□ -1.57
SSRP1Q08945 RNA5SP151-201ENST00000365632 117 ntBASIC5.26□□□□□ -1.57
SSRP1Q08945 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSRP1Q08945 MIR195-201ENST00000385194 87 ntBASIC5.26□□□□□ -1.57
SSRP1Q08945 AL049693.1-201ENST00000402760 611 ntBASIC5.26□□□□□ -1.57
SSRP1Q08945 VDAC1P9-201ENST00000412766 841 ntBASIC5.26□□□□□ -1.57
SSRP1Q08945 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.26□□□□□ -1.57
SSRP1Q08945 MTCO2P11-201ENST00000431069 680 ntBASIC5.26□□□□□ -1.57
SSRP1Q08945 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.26□□□□□ -1.57
SSRP1Q08945 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5.26□□□□□ -1.57
SSRP1Q08945 AL512326.1-201ENST00000443050 721 ntBASIC5.26□□□□□ -1.57
SSRP1Q08945 AL353691.1-201ENST00000451332 387 ntBASIC5.26□□□□□ -1.57
SSRP1Q08945 MTND1P12-201ENST00000455231 147 ntBASIC5.26□□□□□ -1.57
SSRP1Q08945 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC5.26□□□□□ -1.57
SSRP1Q08945 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC5.26□□□□□ -1.57
SSRP1Q08945 RN7SL354P-201ENST00000469282 294 ntBASIC5.26□□□□□ -1.57
SSRP1Q08945 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC5.26□□□□□ -1.57
SSRP1Q08945 ARL4AP2-201ENST00000507378 601 ntBASIC5.26□□□□□ -1.57
SSRP1Q08945 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.26□□□□□ -1.57
SSRP1Q08945 PGBD4P4-201ENST00000509673 613 ntBASIC5.26□□□□□ -1.57
SSRP1Q08945 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC5.26□□□□□ -1.57
SSRP1Q08945 AP001781.1-201ENST00000530977 207 ntBASIC5.26□□□□□ -1.57
SSRP1Q08945 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.26□□□□□ -1.57
SSRP1Q08945 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.26□□□□□ -1.57
SSRP1Q08945 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.26□□□□□ -1.57
SSRP1Q08945 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.26□□□□□ -1.57
SSRP1Q08945 HMGB1P33-201ENST00000563485 527 ntBASIC5.26□□□□□ -1.57
SSRP1Q08945 ATP5J2P6-201ENST00000565203 266 ntBASIC5.26□□□□□ -1.57
SSRP1Q08945 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.26□□□□□ -1.57
SSRP1Q08945 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.26□□□□□ -1.57
SSRP1Q08945 AC068790.3-201ENST00000602988 553 ntBASIC5.26□□□□□ -1.57
SSRP1Q08945 AC140113.4-201ENST00000622087 222 ntBASIC5.26□□□□□ -1.57
SSRP1Q08945 AC091905.1-201ENST00000624400 311 ntBASIC5.26□□□□□ -1.57
SSRP1Q08945 AL008636.1-201ENST00000625038 1018 ntBASIC5.26□□□□□ -1.57
SSRP1Q08945 AC091925.2-201ENST00000625059 256 ntBASIC5.26□□□□□ -1.57
SSRP1Q08945 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SSRP1Q08945 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.26□□□□□ -1.57
SSRP1Q08945 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSRP1Q08945 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSRP1Q08945 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.26□□□□□ -1.57
SSRP1Q08945 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.26□□□□□ -1.57
SSRP1Q08945 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSRP1Q08945 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SSRP1Q08945 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SSRP1Q08945 NXPH1-205ENST00000602349 1953 ntBASIC5.25□□□□□ -1.57
SSRP1Q08945 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SSRP1Q08945 CPHL1P-201ENST00000461341 3407 ntBASIC5.25□□□□□ -1.57
SSRP1Q08945 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
SSRP1Q08945 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
SSRP1Q08945 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.25□□□□□ -1.57
SSRP1Q08945 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.25□□□□□ -1.57
SSRP1Q08945 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SSRP1Q08945 Y_RNA.88-201ENST00000363029 99 ntBASIC5.25□□□□□ -1.57
SSRP1Q08945 RNU6-181P-201ENST00000363225 107 ntBASIC5.25□□□□□ -1.57
SSRP1Q08945 SNORD51-201ENST00000384320 80 ntBASIC5.25□□□□□ -1.57
SSRP1Q08945 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SSRP1Q08945 RPL37P18-201ENST00000411602 243 ntBASIC5.25□□□□□ -1.57
SSRP1Q08945 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC5.25□□□□□ -1.57
SSRP1Q08945 MTCYBP24-201ENST00000420387 1106 ntBASIC5.25□□□□□ -1.57
SSRP1Q08945 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC5.25□□□□□ -1.57
SSRP1Q08945 AC019097.1-201ENST00000424783 735 ntBASIC5.25□□□□□ -1.57
SSRP1Q08945 RPL23AP25-201ENST00000430973 463 ntBASIC5.25□□□□□ -1.57
SSRP1Q08945 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.25□□□□□ -1.57
SSRP1Q08945 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.25□□□□□ -1.57
SSRP1Q08945 USP9YP15-201ENST00000442391 422 ntBASIC5.25□□□□□ -1.57
SSRP1Q08945 AC073264.2-201ENST00000448886 166 ntBASIC5.25□□□□□ -1.57
SSRP1Q08945 AC132479.1-201ENST00000449160 144 ntBASIC5.25□□□□□ -1.57
SSRP1Q08945 TPT1P13-201ENST00000449760 499 ntBASIC5.25□□□□□ -1.57
SSRP1Q08945 AC012671.1-201ENST00000451912 203 ntBASIC5.25□□□□□ -1.57
SSRP1Q08945 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.25□□□□□ -1.57
SSRP1Q08945 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC5.25□□□□□ -1.57
SSRP1Q08945 AC092989.1-201ENST00000481235 277 ntBASIC5.25□□□□□ -1.57
SSRP1Q08945 AC055855.1-201ENST00000489563 579 ntBASIC5.25□□□□□ -1.57
SSRP1Q08945 AC108022.1-201ENST00000493466 478 ntBASIC5.25□□□□□ -1.57
SSRP1Q08945 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.25□□□□□ -1.57
SSRP1Q08945 FAM92A1P2-202ENST00000504766 877 ntBASIC5.25□□□□□ -1.57
SSRP1Q08945 AC010587.1-201ENST00000505809 469 ntBASIC5.25□□□□□ -1.57
SSRP1Q08945 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.25□□□□□ -1.57
SSRP1Q08945 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.25□□□□□ -1.57
SSRP1Q08945 RNU6-445P-201ENST00000516949 107 ntBASIC5.25□□□□□ -1.57
SSRP1Q08945 CDH12P4-201ENST00000517835 295 ntBASIC5.25□□□□□ -1.57
SSRP1Q08945 CDH12P3-201ENST00000517935 295 ntBASIC5.25□□□□□ -1.57
SSRP1Q08945 CDH12P1-201ENST00000518435 295 ntBASIC5.25□□□□□ -1.57
SSRP1Q08945 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.25□□□□□ -1.57
SSRP1Q08945 AC107934.1-201ENST00000522215 217 ntBASIC5.25□□□□□ -1.57
SSRP1Q08945 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.25□□□□□ -1.57
SSRP1Q08945 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.25□□□□□ -1.57
SSRP1Q08945 OR5AQ1P-201ENST00000527596 927 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms