Protein–RNA interactions for Protein: Q02880

TOP2B, DNA topoisomerase 2-beta, humanhuman

Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2BQ02880 AC117522.2-201ENST00000510049 657 ntBASIC3.84□□□□□ -1.8
TOP2BQ02880 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.84□□□□□ -1.8
TOP2BQ02880 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.84□□□□□ -1.8
TOP2BQ02880 AC006116.7-201ENST00000590141 756 ntBASIC3.84□□□□□ -1.8
TOP2BQ02880 snoU13.31-201ENST00000607291 104 ntBASIC3.84□□□□□ -1.8
TOP2BQ02880 OR10AB1P-202ENST00000641219 1686 ntBASIC3.83□□□□□ -1.8
TOP2BQ02880 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TOP2BQ02880 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
TOP2BQ02880 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
TOP2BQ02880 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.83□□□□□ -1.8
TOP2BQ02880 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
TOP2BQ02880 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TOP2BQ02880 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TOP2BQ02880 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.83□□□□□ -1.8
TOP2BQ02880 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.83□□□□□ -1.8
TOP2BQ02880 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TOP2BQ02880 AC093311.1-201ENST00000506586 2021 ntBASIC3.83□□□□□ -1.8
TOP2BQ02880 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
TOP2BQ02880 MIR142-201ENST00000384835 87 ntBASIC3.82□□□□□ -1.8
TOP2BQ02880 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
TOP2BQ02880 AGGF1P8-201ENST00000562979 1000 ntBASIC3.82□□□□□ -1.8
TOP2BQ02880 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.82□□□□□ -1.8
TOP2BQ02880 MIR6873-201ENST00000622788 63 ntBASIC3.82□□□□□ -1.8
TOP2BQ02880 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TOP2BQ02880 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC3.82□□□□□ -1.8
TOP2BQ02880 Y_RNA.540-201ENST00000384638 111 ntBASIC3.81□□□□□ -1.8
TOP2BQ02880 AL023284.1-201ENST00000403956 276 ntBASIC3.81□□□□□ -1.8
TOP2BQ02880 GSTA9P-201ENST00000406231 611 ntBASIC3.81□□□□□ -1.8
TOP2BQ02880 PTP4A1P7-201ENST00000423476 514 ntBASIC3.81□□□□□ -1.8
TOP2BQ02880 AL353729.1-201ENST00000425044 720 ntBASIC3.81□□□□□ -1.8
TOP2BQ02880 AC092427.1-202ENST00000430569 476 ntBASIC3.81□□□□□ -1.8
TOP2BQ02880 XKRY-201ENST00000510392 1100 ntBASIC3.81□□□□□ -1.8
TOP2BQ02880 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.81□□□□□ -1.8
TOP2BQ02880 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.81□□□□□ -1.8
TOP2BQ02880 RNU6ATAC9P-201ENST00000516210 116 ntBASIC3.81□□□□□ -1.8
TOP2BQ02880 SCARNA17.1-201ENST00000516211 143 ntBASIC3.81□□□□□ -1.8
TOP2BQ02880 SCARNA17.2-201ENST00000516334 143 ntBASIC3.81□□□□□ -1.8
TOP2BQ02880 AP003467.2-201ENST00000520175 319 ntBASIC3.81□□□□□ -1.8
TOP2BQ02880 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.81□□□□□ -1.8
TOP2BQ02880 OR4U1P-201ENST00000554958 912 ntBASIC3.81□□□□□ -1.8
TOP2BQ02880 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.81□□□□□ -1.8
TOP2BQ02880 CR589904.2-201ENST00000612533 440 ntBASIC3.81□□□□□ -1.8
TOP2BQ02880 SCARNA17.4-201ENST00000614296 143 ntBASIC3.81□□□□□ -1.8
TOP2BQ02880 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
TOP2BQ02880 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TOP2BQ02880 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.81□□□□□ -1.8
TOP2BQ02880 AC011460.1-201ENST00000636268 1834 ntBASIC3.81□□□□□ -1.8
TOP2BQ02880 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.81□□□□□ -1.8
TOP2BQ02880 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.81□□□□□ -1.8
TOP2BQ02880 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.81□□□□□ -1.8
TOP2BQ02880 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TOP2BQ02880 HMGB1P11-201ENST00000413899 637 ntBASIC3.81□□□□□ -1.8
TOP2BQ02880 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.81□□□□□ -1.8
TOP2BQ02880 MTATP6P11-201ENST00000428071 670 ntBASIC3.81□□□□□ -1.8
TOP2BQ02880 EXTL2P1-201ENST00000446218 416 ntBASIC3.81□□□□□ -1.8
TOP2BQ02880 USP9YP5-201ENST00000511770 630 ntBASIC3.81□□□□□ -1.8
TOP2BQ02880 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.81□□□□□ -1.8
TOP2BQ02880 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.81□□□□□ -1.8
TOP2BQ02880 AP004247.3-201ENST00000608682 624 ntBASIC3.81□□□□□ -1.8
TOP2BQ02880 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.8□□□□□ -1.8
TOP2BQ02880 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TOP2BQ02880 AC012078.1-201ENST00000405035 1646 ntBASIC3.8□□□□□ -1.8
TOP2BQ02880 AL512646.1-201ENST00000269395 1077 ntBASIC3.8□□□□□ -1.8
TOP2BQ02880 MIR499A-201ENST00000384903 122 ntBASIC3.8□□□□□ -1.8
TOP2BQ02880 RPS15AP28-201ENST00000435088 386 ntBASIC3.8□□□□□ -1.8
TOP2BQ02880 AC108860.1-201ENST00000484521 383 ntBASIC3.8□□□□□ -1.8
TOP2BQ02880 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.8□□□□□ -1.8
TOP2BQ02880 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.8□□□□□ -1.8
TOP2BQ02880 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TOP2BQ02880 AL845331.3-202ENST00000562856 261 ntBASIC3.8□□□□□ -1.8
TOP2BQ02880 AC097714.1-201ENST00000511272 1647 ntBASIC3.79□□□□□ -1.8
TOP2BQ02880 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
TOP2BQ02880 AC011753.1-201ENST00000451001 220 ntBASIC3.79□□□□□ -1.8
TOP2BQ02880 AP000893.1-201ENST00000474462 794 ntBASIC3.79□□□□□ -1.8
TOP2BQ02880 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.79□□□□□ -1.8
TOP2BQ02880 NDUFA5P6-201ENST00000542110 379 ntBASIC3.79□□□□□ -1.8
TOP2BQ02880 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.79□□□□□ -1.8
TOP2BQ02880 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
TOP2BQ02880 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TOP2BQ02880 AC010881.1-201ENST00000433830 235 ntBASIC3.78□□□□□ -1.8
TOP2BQ02880 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.78□□□□□ -1.8
TOP2BQ02880 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.78□□□□□ -1.8
TOP2BQ02880 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.78□□□□□ -1.8
TOP2BQ02880 HMGB1P41-201ENST00000520234 440 ntBASIC3.78□□□□□ -1.8
TOP2BQ02880 OR5BN1P-201ENST00000532955 829 ntBASIC3.78□□□□□ -1.8
TOP2BQ02880 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.78□□□□□ -1.8
TOP2BQ02880 AC107294.3-201ENST00000609211 526 ntBASIC3.78□□□□□ -1.8
TOP2BQ02880 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
TOP2BQ02880 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TOP2BQ02880 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.78□□□□□ -1.81
TOP2BQ02880 ZNF542P-204ENST00000482727 1305 ntBASIC3.78□□□□□ -1.81
TOP2BQ02880 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
TOP2BQ02880 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
TOP2BQ02880 RNU2-2P-201ENST00000410396 191 ntBASIC3.77□□□□□ -1.81
TOP2BQ02880 AC234781.4-201ENST00000419384 244 ntBASIC3.77□□□□□ -1.81
TOP2BQ02880 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.77□□□□□ -1.81
TOP2BQ02880 TRIM60P18-201ENST00000441518 828 ntBASIC3.77□□□□□ -1.81
TOP2BQ02880 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
TOP2BQ02880 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.77□□□□□ -1.81
TOP2BQ02880 ELOCP31-201ENST00000540463 467 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms