Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 DNAJC19P4-201ENST00000440115 345 ntBASIC1.68□□□□□ -2.14
PRKDCP78527 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.68□□□□□ -2.14
PRKDCP78527 RN7SL633P-201ENST00000488974 297 ntBASIC1.68□□□□□ -2.14
PRKDCP78527 RN7SL283P-201ENST00000489055 303 ntBASIC1.68□□□□□ -2.14
PRKDCP78527 AC100870.1-201ENST00000522035 505 ntBASIC1.68□□□□□ -2.14
PRKDCP78527 AC021269.2-201ENST00000532318 330 ntBASIC1.68□□□□□ -2.14
PRKDCP78527 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
PRKDCP78527 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.68□□□□□ -2.14
PRKDCP78527 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC1.68□□□□□ -2.14
PRKDCP78527 MIR6733-201ENST00000635723 61 ntBASIC1.68□□□□□ -2.14
PRKDCP78527 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC1.68□□□□□ -2.14
PRKDCP78527 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
PRKDCP78527 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC1.68□□□□□ -2.14
PRKDCP78527 RPL21P3-201ENST00000395517 478 ntBASIC1.68□□□□□ -2.14
PRKDCP78527 AL445646.1-201ENST00000431784 216 ntBASIC1.68□□□□□ -2.14
PRKDCP78527 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.68□□□□□ -2.14
PRKDCP78527 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.68□□□□□ -2.14
PRKDCP78527 RN7SKP234-201ENST00000517173 224 ntBASIC1.68□□□□□ -2.14
PRKDCP78527 AL356266.1-201ENST00000623311 483 ntBASIC1.68□□□□□ -2.14
PRKDCP78527 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.68□□□□□ -2.14
PRKDCP78527 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
PRKDCP78527 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
PRKDCP78527 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC1.68□□□□□ -2.14
PRKDCP78527 SNORA67.3-201ENST00000384366 140 ntBASIC1.68□□□□□ -2.14
PRKDCP78527 RN7SKP140-201ENST00000411196 284 ntBASIC1.68□□□□□ -2.14
PRKDCP78527 AC080125.1-201ENST00000414888 684 ntBASIC1.68□□□□□ -2.14
PRKDCP78527 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.68□□□□□ -2.14
PRKDCP78527 RPL5P13-201ENST00000462840 709 ntBASIC1.68□□□□□ -2.14
PRKDCP78527 AC135721.1-201ENST00000497954 479 ntBASIC1.68□□□□□ -2.14
PRKDCP78527 MIR2114-201ENST00000516645 80 ntBASIC1.68□□□□□ -2.14
PRKDCP78527 AC122134.1-201ENST00000565664 1104 ntBASIC1.68□□□□□ -2.14
PRKDCP78527 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC1.68□□□□□ -2.14
PRKDCP78527 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
PRKDCP78527 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
PRKDCP78527 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
PRKDCP78527 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC1.68□□□□□ -2.14
PRKDCP78527 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
PRKDCP78527 Y_RNA.224-201ENST00000364308 111 ntBASIC1.68□□□□□ -2.14
PRKDCP78527 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
PRKDCP78527 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC1.68□□□□□ -2.14
PRKDCP78527 RPS15AP28-201ENST00000435088 386 ntBASIC1.68□□□□□ -2.14
PRKDCP78527 IGLVIV-53-201ENST00000520107 367 ntBASIC1.68□□□□□ -2.14
PRKDCP78527 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC1.68□□□□□ -2.14
PRKDCP78527 MIR3605-201ENST00000583214 100 ntBASIC1.68□□□□□ -2.14
PRKDCP78527 AC103710.1-201ENST00000610003 901 ntBASIC1.68□□□□□ -2.14
PRKDCP78527 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC1.67□□□□□ -2.14
PRKDCP78527 AL592437.1-201ENST00000443781 492 ntBASIC1.67□□□□□ -2.14
PRKDCP78527 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC1.67□□□□□ -2.14
PRKDCP78527 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC1.67□□□□□ -2.14
PRKDCP78527 HSPE1P18-201ENST00000517602 280 ntBASIC1.67□□□□□ -2.14
PRKDCP78527 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC1.67□□□□□ -2.14
PRKDCP78527 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.67□□□□□ -2.14
PRKDCP78527 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.67□□□□□ -2.14
PRKDCP78527 AP001542.2-201ENST00000593141 364 ntBASIC1.67□□□□□ -2.14
PRKDCP78527 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
PRKDCP78527 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
PRKDCP78527 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC1.67□□□□□ -2.14
PRKDCP78527 AL353743.4-201ENST00000422653 1547 ntBASIC1.67□□□□□ -2.14
PRKDCP78527 MDM4-202ENST00000367180 547 ntTSL 3 BASIC1.67□□□□□ -2.14
PRKDCP78527 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC1.67□□□□□ -2.14
PRKDCP78527 RNY1P14-201ENST00000384426 108 ntBASIC1.67□□□□□ -2.14
PRKDCP78527 AC004987.3-201ENST00000413879 771 ntBASIC1.67□□□□□ -2.14
PRKDCP78527 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC1.67□□□□□ -2.14
PRKDCP78527 LTV1P1-201ENST00000510683 1237 ntBASIC1.67□□□□□ -2.14
PRKDCP78527 AP000857.1-201ENST00000532151 543 ntBASIC1.67□□□□□ -2.14
PRKDCP78527 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.67□□□□□ -2.14
PRKDCP78527 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.67□□□□□ -2.14
PRKDCP78527 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.67□□□□□ -2.14
PRKDCP78527 AC091046.2-201ENST00000620775 665 ntBASIC1.67□□□□□ -2.14
PRKDCP78527 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC1.67□□□□□ -2.14
PRKDCP78527 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
PRKDCP78527 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
PRKDCP78527 Y_RNA.295-201ENST00000364918 102 ntBASIC1.67□□□□□ -2.14
PRKDCP78527 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC1.67□□□□□ -2.14
PRKDCP78527 AC110741.2-201ENST00000605278 268 ntBASIC1.67□□□□□ -2.14
PRKDCP78527 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
PRKDCP78527 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.66□□□□□ -2.14
PRKDCP78527 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC1.66□□□□□ -2.14
PRKDCP78527 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
PRKDCP78527 FRG1BP-201ENST00000278882 761 ntBASIC1.66□□□□□ -2.14
PRKDCP78527 RPS15AP12-201ENST00000419498 388 ntBASIC1.66□□□□□ -2.14
PRKDCP78527 AL450263.2-201ENST00000439400 589 ntBASIC1.66□□□□□ -2.14
PRKDCP78527 Z73417.1-201ENST00000447373 778 ntBASIC1.66□□□□□ -2.14
PRKDCP78527 AC007395.1-201ENST00000451333 677 ntBASIC1.66□□□□□ -2.14
PRKDCP78527 REXO2-218ENST00000544827 880 ntTSL 3 BASIC1.66□□□□□ -2.14
PRKDCP78527 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.66□□□□□ -2.14
PRKDCP78527 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
PRKDCP78527 MTND5P19-201ENST00000424872 1794 ntBASIC1.66□□□□□ -2.14
PRKDCP78527 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
PRKDCP78527 RPL23AP45-201ENST00000476406 468 ntBASIC1.66□□□□□ -2.14
PRKDCP78527 RPL23AP84-201ENST00000571193 464 ntBASIC1.66□□□□□ -2.14
PRKDCP78527 AC074140.1-201ENST00000621617 208 ntBASIC1.66□□□□□ -2.14
PRKDCP78527 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
PRKDCP78527 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
PRKDCP78527 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.66□□□□□ -2.14
PRKDCP78527 RN7SKP285-201ENST00000410137 318 ntBASIC1.66□□□□□ -2.14
PRKDCP78527 RPL23AP58-201ENST00000440453 469 ntBASIC1.66□□□□□ -2.14
PRKDCP78527 CKS1BP7-201ENST00000522230 235 ntBASIC1.66□□□□□ -2.14
PRKDCP78527 Z99496.1-201ENST00000469424 1477 ntBASIC1.66□□□□□ -2.14
PRKDCP78527 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms