Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.41□□□□□ -1.86
CX3CL1P78423 AC080014.1-201ENST00000496877 1201 ntBASIC3.41□□□□□ -1.86
CX3CL1P78423 AC078918.1-201ENST00000498515 228 ntBASIC3.41□□□□□ -1.86
CX3CL1P78423 AC093840.1-201ENST00000511599 336 ntBASIC3.41□□□□□ -1.86
CX3CL1P78423 AC017037.2-201ENST00000513850 890 ntBASIC3.41□□□□□ -1.86
CX3CL1P78423 AC117532.1-201ENST00000514638 323 ntBASIC3.41□□□□□ -1.86
CX3CL1P78423 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.41□□□□□ -1.86
CX3CL1P78423 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.41□□□□□ -1.86
CX3CL1P78423 MTCYBP41-201ENST00000528913 1123 ntBASIC3.41□□□□□ -1.86
CX3CL1P78423 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.41□□□□□ -1.86
CX3CL1P78423 AC009643.1-201ENST00000532030 391 ntBASIC3.41□□□□□ -1.86
CX3CL1P78423 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.41□□□□□ -1.86
CX3CL1P78423 AC006064.5-201ENST00000541782 248 ntBASIC3.41□□□□□ -1.86
CX3CL1P78423 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.41□□□□□ -1.86
CX3CL1P78423 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.41□□□□□ -1.86
CX3CL1P78423 AL109766.1-201ENST00000555080 552 ntBASIC3.41□□□□□ -1.86
CX3CL1P78423 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.41□□□□□ -1.86
CX3CL1P78423 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.41□□□□□ -1.86
CX3CL1P78423 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.41□□□□□ -1.86
CX3CL1P78423 ACTR3BP3-201ENST00000565577 979 ntBASIC3.41□□□□□ -1.86
CX3CL1P78423 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.41□□□□□ -1.86
CX3CL1P78423 MIR4700-201ENST00000578311 74 ntBASIC3.41□□□□□ -1.86
CX3CL1P78423 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.41□□□□□ -1.86
CX3CL1P78423 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.41□□□□□ -1.86
CX3CL1P78423 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.41□□□□□ -1.86
CX3CL1P78423 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.41□□□□□ -1.86
CX3CL1P78423 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.41□□□□□ -1.86
CX3CL1P78423 PRELID3BP8-201ENST00000604148 295 ntBASIC3.41□□□□□ -1.86
CX3CL1P78423 AL354984.3-201ENST00000604803 325 ntBASIC3.41□□□□□ -1.86
CX3CL1P78423 HMGB1P50-201ENST00000605814 607 ntBASIC3.41□□□□□ -1.86
CX3CL1P78423 AC012360.2-201ENST00000609349 391 ntBASIC3.41□□□□□ -1.86
CX3CL1P78423 AL590099.1-201ENST00000615276 138 ntBASIC3.41□□□□□ -1.86
CX3CL1P78423 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
CX3CL1P78423 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.41□□□□□ -1.86
CX3CL1P78423 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.41□□□□□ -1.86
CX3CL1P78423 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CX3CL1P78423 AC138649.5-201ENST00000637456 137 ntBASIC3.41□□□□□ -1.86
CX3CL1P78423 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.41□□□□□ -1.86
CX3CL1P78423 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CX3CL1P78423 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.41□□□□□ -1.86
CX3CL1P78423 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.41□□□□□ -1.86
CX3CL1P78423 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CX3CL1P78423 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.41□□□□□ -1.86
CX3CL1P78423 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CX3CL1P78423 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.4□□□□□ -1.86
CX3CL1P78423 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.4□□□□□ -1.86
CX3CL1P78423 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
CX3CL1P78423 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
CX3CL1P78423 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.4□□□□□ -1.86
CX3CL1P78423 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.4□□□□□ -1.86
CX3CL1P78423 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CX3CL1P78423 RNA5SP509-201ENST00000364577 119 ntBASIC3.4□□□□□ -1.87
CX3CL1P78423 RNU6-359P-201ENST00000365466 108 ntBASIC3.4□□□□□ -1.87
CX3CL1P78423 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CX3CL1P78423 MTCYBP36-201ENST00000404146 440 ntBASIC3.4□□□□□ -1.87
CX3CL1P78423 SNORA11B-201ENST00000408175 129 ntBASIC3.4□□□□□ -1.87
CX3CL1P78423 AC011933.1-201ENST00000413334 321 ntBASIC3.4□□□□□ -1.87
CX3CL1P78423 EI24P1-201ENST00000416584 867 ntBASIC3.4□□□□□ -1.87
CX3CL1P78423 CYCSP46-201ENST00000423569 204 ntBASIC3.4□□□□□ -1.87
CX3CL1P78423 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CX3CL1P78423 AL157831.1-201ENST00000426134 473 ntBASIC3.4□□□□□ -1.87
CX3CL1P78423 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.4□□□□□ -1.87
CX3CL1P78423 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.4□□□□□ -1.87
CX3CL1P78423 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.4□□□□□ -1.87
CX3CL1P78423 RPL37P21-201ENST00000435890 276 ntBASIC3.4□□□□□ -1.87
CX3CL1P78423 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.4□□□□□ -1.87
CX3CL1P78423 RPL7P28-201ENST00000437739 740 ntBASIC3.4□□□□□ -1.87
CX3CL1P78423 CBX1P1-201ENST00000440184 427 ntBASIC3.4□□□□□ -1.87
CX3CL1P78423 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.4□□□□□ -1.87
CX3CL1P78423 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.4□□□□□ -1.87
CX3CL1P78423 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.4□□□□□ -1.87
CX3CL1P78423 HMGB3P22-202ENST00000451823 572 ntBASIC3.4□□□□□ -1.87
CX3CL1P78423 AC104308.1-201ENST00000454621 333 ntBASIC3.4□□□□□ -1.87
CX3CL1P78423 RPL23AP81-201ENST00000455252 467 ntBASIC3.4□□□□□ -1.87
CX3CL1P78423 AC116533.1-201ENST00000459748 321 ntBASIC3.4□□□□□ -1.87
CX3CL1P78423 AC011276.1-201ENST00000469688 323 ntBASIC3.4□□□□□ -1.87
CX3CL1P78423 AC006463.2-201ENST00000473326 348 ntBASIC3.4□□□□□ -1.87
CX3CL1P78423 AC021382.1-201ENST00000483523 359 ntBASIC3.4□□□□□ -1.87
CX3CL1P78423 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.4□□□□□ -1.87
CX3CL1P78423 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CX3CL1P78423 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.4□□□□□ -1.87
CX3CL1P78423 RNU6-1095P-201ENST00000516148 108 ntBASIC3.4□□□□□ -1.87
CX3CL1P78423 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.4□□□□□ -1.87
CX3CL1P78423 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CX3CL1P78423 AP003497.1-201ENST00000528472 562 ntBASIC3.4□□□□□ -1.87
CX3CL1P78423 CR383656.7-201ENST00000548164 174 ntBASIC3.4□□□□□ -1.87
CX3CL1P78423 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.4□□□□□ -1.87
CX3CL1P78423 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CX3CL1P78423 AL121603.1-201ENST00000553815 142 ntBASIC3.4□□□□□ -1.87
CX3CL1P78423 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.4□□□□□ -1.87
CX3CL1P78423 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.4□□□□□ -1.87
CX3CL1P78423 MIR4277-201ENST00000578298 84 ntBASIC3.4□□□□□ -1.87
CX3CL1P78423 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.4□□□□□ -1.87
CX3CL1P78423 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CX3CL1P78423 AC022916.3-201ENST00000592961 742 ntBASIC3.4□□□□□ -1.87
CX3CL1P78423 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.4□□□□□ -1.87
CX3CL1P78423 AC020914.4-201ENST00000597690 277 ntBASIC3.4□□□□□ -1.87
CX3CL1P78423 U73023.1-201ENST00000603134 700 ntBASIC3.4□□□□□ -1.87
CX3CL1P78423 AC012603.1-201ENST00000606424 528 ntBASIC3.4□□□□□ -1.87
CX3CL1P78423 AC135507.1-201ENST00000607214 561 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms