Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 MTCO2P5-201ENST00000422621 426 ntBASIC3.88□□□□□ -1.79
CDH12P55289 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.88□□□□□ -1.79
CDH12P55289 AC007742.1-201ENST00000425789 329 ntBASIC3.88□□□□□ -1.79
CDH12P55289 AL157831.1-201ENST00000426134 473 ntBASIC3.88□□□□□ -1.79
CDH12P55289 PSMA6P3-201ENST00000428242 164 ntBASIC3.88□□□□□ -1.79
CDH12P55289 AC008065.1-201ENST00000428525 348 ntBASIC3.88□□□□□ -1.79
CDH12P55289 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.88□□□□□ -1.79
CDH12P55289 RPS3AP54-201ENST00000435535 734 ntBASIC3.88□□□□□ -1.79
CDH12P55289 ELOCP26-201ENST00000436067 329 ntBASIC3.88□□□□□ -1.79
CDH12P55289 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.88□□□□□ -1.79
CDH12P55289 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.88□□□□□ -1.79
CDH12P55289 PDSS1P2-201ENST00000449397 678 ntBASIC3.88□□□□□ -1.79
CDH12P55289 AL590365.1-201ENST00000450788 243 ntBASIC3.88□□□□□ -1.79
CDH12P55289 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.88□□□□□ -1.79
CDH12P55289 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.88□□□□□ -1.79
CDH12P55289 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.88□□□□□ -1.79
CDH12P55289 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC3.88□□□□□ -1.79
CDH12P55289 RPL23AP81-201ENST00000455252 467 ntBASIC3.88□□□□□ -1.79
CDH12P55289 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.88□□□□□ -1.79
CDH12P55289 AC231760.1-201ENST00000498002 260 ntBASIC3.88□□□□□ -1.79
CDH12P55289 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.88□□□□□ -1.79
CDH12P55289 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.88□□□□□ -1.79
CDH12P55289 KCTD9P2-201ENST00000512203 1013 ntBASIC3.88□□□□□ -1.79
CDH12P55289 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.88□□□□□ -1.79
CDH12P55289 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.88□□□□□ -1.79
CDH12P55289 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.88□□□□□ -1.79
CDH12P55289 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.88□□□□□ -1.79
CDH12P55289 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.88□□□□□ -1.79
CDH12P55289 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.88□□□□□ -1.79
CDH12P55289 AC245505.1-201ENST00000556398 224 ntBASIC3.88□□□□□ -1.79
CDH12P55289 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CDH12P55289 OR4G1P-201ENST00000588632 938 ntBASIC3.88□□□□□ -1.79
CDH12P55289 AC007566.2-201ENST00000603642 413 ntBASIC3.88□□□□□ -1.79
CDH12P55289 AC112191.3-201ENST00000604371 277 ntBASIC3.88□□□□□ -1.79
CDH12P55289 AC090948.1-201ENST00000607464 549 ntBASIC3.88□□□□□ -1.79
CDH12P55289 AC098614.4-201ENST00000607601 462 ntBASIC3.88□□□□□ -1.79
CDH12P55289 AL513477.2-201ENST00000607858 568 ntBASIC3.88□□□□□ -1.79
CDH12P55289 AC013476.2-201ENST00000614456 459 ntBASIC3.88□□□□□ -1.79
CDH12P55289 MIR4727-201ENST00000622232 55 ntBASIC3.88□□□□□ -1.79
CDH12P55289 AL445363.3-201ENST00000623080 671 ntBASIC3.88□□□□□ -1.79
CDH12P55289 IQCB2P-201ENST00000401788 1633 ntBASIC3.88□□□□□ -1.79
CDH12P55289 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CDH12P55289 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.87□□□□□ -1.79
CDH12P55289 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.87□□□□□ -1.79
CDH12P55289 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDH12P55289 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDH12P55289 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CDH12P55289 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.87□□□□□ -1.79
CDH12P55289 AP002001.2-201ENST00000529025 1469 ntBASIC3.87□□□□□ -1.79
CDH12P55289 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.87□□□□□ -1.79
CDH12P55289 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDH12P55289 RNU6-398P-201ENST00000384143 109 ntBASIC3.87□□□□□ -1.79
CDH12P55289 SNORA37-201ENST00000384504 129 ntBASIC3.87□□□□□ -1.79
CDH12P55289 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDH12P55289 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.87□□□□□ -1.79
CDH12P55289 Y_RNA.598-201ENST00000410480 95 ntBASIC3.87□□□□□ -1.79
CDH12P55289 Z97055.1-201ENST00000419730 712 ntBASIC3.87□□□□□ -1.79
CDH12P55289 BRWD1P3-201ENST00000428816 390 ntBASIC3.87□□□□□ -1.79
CDH12P55289 MTCYBP45-201ENST00000435243 565 ntBASIC3.87□□□□□ -1.79
CDH12P55289 Z74696.2-201ENST00000436514 498 ntBASIC3.87□□□□□ -1.79
CDH12P55289 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDH12P55289 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.87□□□□□ -1.79
CDH12P55289 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.87□□□□□ -1.79
CDH12P55289 HMGB3P22-202ENST00000451823 572 ntBASIC3.87□□□□□ -1.79
CDH12P55289 SNRPFP4-201ENST00000456366 242 ntBASIC3.87□□□□□ -1.79
CDH12P55289 RN7SL98P-201ENST00000462271 300 ntBASIC3.87□□□□□ -1.79
CDH12P55289 SRRM1P2-201ENST00000464531 1192 ntBASIC3.87□□□□□ -1.79
CDH12P55289 AC010460.1-201ENST00000507087 466 ntBASIC3.87□□□□□ -1.79
CDH12P55289 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CDH12P55289 AC109464.2-201ENST00000510242 943 ntBASIC3.87□□□□□ -1.79
CDH12P55289 MTCO3P44-201ENST00000510977 541 ntBASIC3.87□□□□□ -1.79
CDH12P55289 AC108064.1-201ENST00000513791 460 ntBASIC3.87□□□□□ -1.79
CDH12P55289 AC093677.1-201ENST00000514414 678 ntBASIC3.87□□□□□ -1.79
CDH12P55289 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.87□□□□□ -1.79
CDH12P55289 IGKV2-38-201ENST00000517443 247 ntBASIC3.87□□□□□ -1.79
CDH12P55289 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.87□□□□□ -1.79
CDH12P55289 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.87□□□□□ -1.79
CDH12P55289 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.87□□□□□ -1.79
CDH12P55289 PTP4A1P6-201ENST00000531034 478 ntBASIC3.87□□□□□ -1.79
CDH12P55289 AC068446.3-201ENST00000555285 382 ntBASIC3.87□□□□□ -1.79
CDH12P55289 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.87□□□□□ -1.79
CDH12P55289 AC009063.1-201ENST00000563342 702 ntBASIC3.87□□□□□ -1.79
CDH12P55289 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.87□□□□□ -1.79
CDH12P55289 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.87□□□□□ -1.79
CDH12P55289 AC107304.1-201ENST00000604229 296 ntBASIC3.87□□□□□ -1.79
CDH12P55289 AC131902.3-201ENST00000611767 581 ntBASIC3.87□□□□□ -1.79
CDH12P55289 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.87□□□□□ -1.79
CDH12P55289 AL359893.1-201ENST00000447628 1580 ntBASIC3.87□□□□□ -1.79
CDH12P55289 AC097714.1-201ENST00000511272 1647 ntBASIC3.87□□□□□ -1.79
CDH12P55289 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDH12P55289 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.87□□□□□ -1.79
CDH12P55289 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CDH12P55289 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDH12P55289 EIF2AP4-201ENST00000424793 1781 ntBASIC3.86□□□□□ -1.79
CDH12P55289 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CDH12P55289 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CDH12P55289 CCT4P2-201ENST00000233836 1548 ntBASIC3.86□□□□□ -1.79
CDH12P55289 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.86□□□□□ -1.79
CDH12P55289 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.86□□□□□ -1.79
CDH12P55289 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms