Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC024595.1-201ENST00000623088 387 ntBASIC2.92□□□□□ -1.94
CXCL12P48061 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.92□□□□□ -1.94
CXCL12P48061 AC073476.4-201ENST00000628409 72 ntBASIC2.92□□□□□ -1.94
CXCL12P48061 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.92□□□□□ -1.94
CXCL12P48061 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
CXCL12P48061 AF117829.1-206ENST00000621883 3802 ntBASIC2.92□□□□□ -1.94
CXCL12P48061 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CXCL12P48061 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
CXCL12P48061 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
CXCL12P48061 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CXCL12P48061 MIR16-2-201ENST00000362117 81 ntBASIC2.91□□□□□ -1.94
CXCL12P48061 RNU6-481P-201ENST00000384194 107 ntBASIC2.91□□□□□ -1.94
CXCL12P48061 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
CXCL12P48061 RNU2-72P-201ENST00000411175 163 ntBASIC2.91□□□□□ -1.94
CXCL12P48061 PRELID3BP11-201ENST00000414230 479 ntBASIC2.91□□□□□ -1.94
CXCL12P48061 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC2.91□□□□□ -1.94
CXCL12P48061 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CXCL12P48061 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CXCL12P48061 MYL8P-204ENST00000431574 518 ntBASIC2.91□□□□□ -1.94
CXCL12P48061 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.91□□□□□ -1.94
CXCL12P48061 NEK4P1-201ENST00000433383 879 ntBASIC2.91□□□□□ -1.94
CXCL12P48061 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.91□□□□□ -1.94
CXCL12P48061 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.91□□□□□ -1.94
CXCL12P48061 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC2.91□□□□□ -1.94
CXCL12P48061 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.91□□□□□ -1.94
CXCL12P48061 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC2.91□□□□□ -1.94
CXCL12P48061 AL035407.2-201ENST00000454090 378 ntBASIC2.91□□□□□ -1.94
CXCL12P48061 AC078857.1-201ENST00000469870 667 ntBASIC2.91□□□□□ -1.94
CXCL12P48061 CYCSP20-201ENST00000473154 315 ntBASIC2.91□□□□□ -1.94
CXCL12P48061 RN7SL20P-201ENST00000488827 297 ntBASIC2.91□□□□□ -1.94
CXCL12P48061 AC110792.2-201ENST00000510278 224 ntBASIC2.91□□□□□ -1.94
CXCL12P48061 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC2.91□□□□□ -1.94
CXCL12P48061 RNU4-29P-201ENST00000515943 174 ntBASIC2.91□□□□□ -1.94
CXCL12P48061 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.91□□□□□ -1.94
CXCL12P48061 AP003049.1-201ENST00000529418 457 ntBASIC2.91□□□□□ -1.94
CXCL12P48061 AP000916.1-201ENST00000533869 835 ntBASIC2.91□□□□□ -1.94
CXCL12P48061 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.91□□□□□ -1.94
CXCL12P48061 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC2.91□□□□□ -1.94
CXCL12P48061 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.91□□□□□ -1.94
CXCL12P48061 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.91□□□□□ -1.94
CXCL12P48061 AC096947.1-201ENST00000603233 470 ntBASIC2.91□□□□□ -1.94
CXCL12P48061 AC113194.1-201ENST00000606037 500 ntBASIC2.91□□□□□ -1.94
CXCL12P48061 AC099778.2-201ENST00000610904 211 ntBASIC2.91□□□□□ -1.94
CXCL12P48061 AC008121.2-201ENST00000614647 523 ntBASIC2.91□□□□□ -1.94
CXCL12P48061 AC048347.1-201ENST00000624621 427 ntBASIC2.91□□□□□ -1.94
CXCL12P48061 AL590396.2-201ENST00000636511 1041 ntBASIC2.91□□□□□ -1.94
CXCL12P48061 ELF2P3-201ENST00000445099 1506 ntBASIC2.91□□□□□ -1.94
CXCL12P48061 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
CXCL12P48061 AC008432.1-201ENST00000615912 1320 ntBASIC2.91□□□□□ -1.94
CXCL12P48061 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
CXCL12P48061 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.9□□□□□ -1.94
CXCL12P48061 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.9□□□□□ -1.94
CXCL12P48061 Y_RNA.110-201ENST00000363220 99 ntBASIC2.9□□□□□ -1.95
CXCL12P48061 SNORD56.4-201ENST00000363883 71 ntBASIC2.9□□□□□ -1.95
CXCL12P48061 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
CXCL12P48061 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CXCL12P48061 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CXCL12P48061 AC092745.2-202ENST00000411880 369 ntBASIC2.9□□□□□ -1.95
CXCL12P48061 AC004987.3-201ENST00000413879 771 ntBASIC2.9□□□□□ -1.95
CXCL12P48061 AC073310.1-201ENST00000423226 1033 ntBASIC2.9□□□□□ -1.95
CXCL12P48061 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.9□□□□□ -1.95
CXCL12P48061 ELOCP6-201ENST00000429066 328 ntBASIC2.9□□□□□ -1.95
CXCL12P48061 ARL5AP4-201ENST00000430731 512 ntBASIC2.9□□□□□ -1.95
CXCL12P48061 RPS26P30-201ENST00000443431 335 ntBASIC2.9□□□□□ -1.95
CXCL12P48061 NIPA2P5-201ENST00000452282 464 ntBASIC2.9□□□□□ -1.95
CXCL12P48061 ELOCP12-201ENST00000458706 328 ntBASIC2.9□□□□□ -1.95
CXCL12P48061 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC2.9□□□□□ -1.95
CXCL12P48061 AC090071.1-201ENST00000507713 644 ntBASIC2.9□□□□□ -1.95
CXCL12P48061 PCBP2P3-201ENST00000509726 843 ntBASIC2.9□□□□□ -1.95
CXCL12P48061 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.9□□□□□ -1.95
CXCL12P48061 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.9□□□□□ -1.95
CXCL12P48061 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.9□□□□□ -1.95
CXCL12P48061 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC2.9□□□□□ -1.95
CXCL12P48061 AC007566.2-201ENST00000603642 413 ntBASIC2.9□□□□□ -1.95
CXCL12P48061 AL450489.1-201ENST00000612071 468 ntBASIC2.9□□□□□ -1.95
CXCL12P48061 MIR8084-201ENST00000614105 89 ntBASIC2.9□□□□□ -1.95
CXCL12P48061 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.9□□□□□ -1.95
CXCL12P48061 AC097372.4-201ENST00000625025 466 ntBASIC2.9□□□□□ -1.95
CXCL12P48061 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC2.9□□□□□ -1.95
CXCL12P48061 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.9□□□□□ -1.95
CXCL12P48061 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CXCL12P48061 DCAF13P1-201ENST00000495256 1330 ntBASIC2.9□□□□□ -1.95
CXCL12P48061 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.9□□□□□ -1.95
CXCL12P48061 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC2.89□□□□□ -1.95
CXCL12P48061 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CXCL12P48061 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CXCL12P48061 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.89□□□□□ -1.95
CXCL12P48061 SNORA70B-201ENST00000384210 135 ntBASIC2.89□□□□□ -1.95
CXCL12P48061 MIR34A-201ENST00000385130 110 ntBASIC2.89□□□□□ -1.95
CXCL12P48061 MIR591-201ENST00000385290 95 ntBASIC2.89□□□□□ -1.95
CXCL12P48061 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CXCL12P48061 HSPE1P26-201ENST00000405341 275 ntBASIC2.89□□□□□ -1.95
CXCL12P48061 RNA5SP274-201ENST00000410484 108 ntBASIC2.89□□□□□ -1.95
CXCL12P48061 RNU6-55P-201ENST00000411092 107 ntBASIC2.89□□□□□ -1.95
CXCL12P48061 RNU6-954P-201ENST00000411355 107 ntBASIC2.89□□□□□ -1.95
CXCL12P48061 AL592148.1-201ENST00000413568 445 ntBASIC2.89□□□□□ -1.95
CXCL12P48061 RPL31P45-201ENST00000419532 356 ntBASIC2.89□□□□□ -1.95
CXCL12P48061 AL606495.1-201ENST00000422100 813 ntBASIC2.89□□□□□ -1.95
CXCL12P48061 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.89□□□□□ -1.95
CXCL12P48061 AC093422.3-201ENST00000428506 305 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 154.2 ms