Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 OR4T1P-201ENST00000554933 911 ntBASIC3.21□□□□□ -1.9
FDFT1P37268 AL136520.1-202ENST00000555494 763 ntBASIC3.21□□□□□ -1.9
FDFT1P37268 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.21□□□□□ -1.9
FDFT1P37268 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.21□□□□□ -1.9
FDFT1P37268 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.21□□□□□ -1.9
FDFT1P37268 AP005229.2-201ENST00000609980 697 ntBASIC3.21□□□□□ -1.9
FDFT1P37268 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
FDFT1P37268 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
FDFT1P37268 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
FDFT1P37268 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
FDFT1P37268 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.2□□□□□ -1.9
FDFT1P37268 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.2□□□□□ -1.9
FDFT1P37268 MTND5P19-201ENST00000424872 1794 ntBASIC3.2□□□□□ -1.9
FDFT1P37268 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
FDFT1P37268 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.2□□□□□ -1.9
FDFT1P37268 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
FDFT1P37268 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
FDFT1P37268 RNVU1-3-201ENST00000364313 161 ntBASIC3.2□□□□□ -1.9
FDFT1P37268 RNU6-730P-201ENST00000383954 104 ntBASIC3.2□□□□□ -1.9
FDFT1P37268 U6.112-201ENST00000384129 70 ntBASIC3.2□□□□□ -1.9
FDFT1P37268 RNU6-821P-201ENST00000390995 107 ntBASIC3.2□□□□□ -1.9
FDFT1P37268 AC245054.2-201ENST00000415639 319 ntBASIC3.2□□□□□ -1.9
FDFT1P37268 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.2□□□□□ -1.9
FDFT1P37268 FNDC3CP-201ENST00000420795 1155 ntBASIC3.2□□□□□ -1.9
FDFT1P37268 AC097713.2-201ENST00000430199 356 ntBASIC3.2□□□□□ -1.9
FDFT1P37268 AL159987.2-201ENST00000432754 307 ntBASIC3.2□□□□□ -1.9
FDFT1P37268 OR2B8P-201ENST00000432841 938 ntBASIC3.2□□□□□ -1.9
FDFT1P37268 AC108734.1-201ENST00000439549 399 ntBASIC3.2□□□□□ -1.9
FDFT1P37268 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.2□□□□□ -1.9
FDFT1P37268 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.2□□□□□ -1.9
FDFT1P37268 UQCRHP3-201ENST00000451503 251 ntBASIC3.2□□□□□ -1.9
FDFT1P37268 ARPC3P2-201ENST00000457786 533 ntBASIC3.2□□□□□ -1.9
FDFT1P37268 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.2□□□□□ -1.9
FDFT1P37268 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.2□□□□□ -1.9
FDFT1P37268 MTCYBP37-201ENST00000510642 1133 ntBASIC3.2□□□□□ -1.9
FDFT1P37268 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.2□□□□□ -1.9
FDFT1P37268 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.2□□□□□ -1.9
FDFT1P37268 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.2□□□□□ -1.9
FDFT1P37268 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.2□□□□□ -1.9
FDFT1P37268 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.2□□□□□ -1.9
FDFT1P37268 ZNF415P1-201ENST00000582279 1166 ntBASIC3.2□□□□□ -1.9
FDFT1P37268 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.2□□□□□ -1.9
FDFT1P37268 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.2□□□□□ -1.9
FDFT1P37268 AC133794.1-201ENST00000602731 914 ntBASIC3.2□□□□□ -1.9
FDFT1P37268 AL109618.2-201ENST00000605527 211 ntBASIC3.2□□□□□ -1.9
FDFT1P37268 AC073968.1-201ENST00000618594 637 ntBASIC3.2□□□□□ -1.9
FDFT1P37268 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.2□□□□□ -1.9
FDFT1P37268 AC018755.4-201ENST00000619715 454 ntBASIC3.2□□□□□ -1.9
FDFT1P37268 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
FDFT1P37268 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.2□□□□□ -1.9
FDFT1P37268 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.19□□□□□ -1.9
FDFT1P37268 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.19□□□□□ -1.9
FDFT1P37268 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
FDFT1P37268 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
FDFT1P37268 RNU6-932P-201ENST00000391108 106 ntBASIC3.19□□□□□ -1.9
FDFT1P37268 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.19□□□□□ -1.9
FDFT1P37268 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.19□□□□□ -1.9
FDFT1P37268 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.19□□□□□ -1.9
FDFT1P37268 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.19□□□□□ -1.9
FDFT1P37268 OR51B8P-201ENST00000449892 769 ntBASIC3.19□□□□□ -1.9
FDFT1P37268 FAM133DP-201ENST00000464802 691 ntBASIC3.19□□□□□ -1.9
FDFT1P37268 AL672167.3-201ENST00000465951 960 ntBASIC3.19□□□□□ -1.9
FDFT1P37268 RPL21P18-201ENST00000469899 480 ntBASIC3.19□□□□□ -1.9
FDFT1P37268 AC105914.1-201ENST00000511798 226 ntBASIC3.19□□□□□ -1.9
FDFT1P37268 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.19□□□□□ -1.9
FDFT1P37268 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.19□□□□□ -1.9
FDFT1P37268 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.19□□□□□ -1.9
FDFT1P37268 MIR3158-1-201ENST00000583596 81 ntBASIC3.19□□□□□ -1.9
FDFT1P37268 MIR4506-201ENST00000584693 77 ntBASIC3.19□□□□□ -1.9
FDFT1P37268 AP002906.1-201ENST00000603405 233 ntBASIC3.19□□□□□ -1.9
FDFT1P37268 AL110115.1-201ENST00000614396 364 ntBASIC3.19□□□□□ -1.9
FDFT1P37268 AC138932.5-201ENST00000617759 563 ntBASIC3.19□□□□□ -1.9
FDFT1P37268 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.19□□□□□ -1.9
FDFT1P37268 AC098679.5-201ENST00000624394 571 ntBASIC3.19□□□□□ -1.9
FDFT1P37268 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.19□□□□□ -1.9
FDFT1P37268 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.19□□□□□ -1.9
FDFT1P37268 MTND2P41-201ENST00000637599 773 ntBASIC3.19□□□□□ -1.9
FDFT1P37268 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.19□□□□□ -1.9
FDFT1P37268 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.19□□□□□ -1.9
FDFT1P37268 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
FDFT1P37268 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.19□□□□□ -1.9
FDFT1P37268 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.19□□□□□ -1.9
FDFT1P37268 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
FDFT1P37268 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
FDFT1P37268 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
FDFT1P37268 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.19□□□□□ -1.9
FDFT1P37268 SGO1P1-201ENST00000603525 1447 ntBASIC3.19□□□□□ -1.9
FDFT1P37268 AL645568.2-201ENST00000432815 1337 ntBASIC3.19□□□□□ -1.9
FDFT1P37268 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
FDFT1P37268 AC130650.2-201ENST00000618736 2403 ntBASIC3.18□□□□□ -1.9
FDFT1P37268 RNU6-1249P-201ENST00000363237 111 ntBASIC3.18□□□□□ -1.9
FDFT1P37268 SNORA51.4-201ENST00000364993 124 ntBASIC3.18□□□□□ -1.9
FDFT1P37268 RNU6-354P-201ENST00000383862 107 ntBASIC3.18□□□□□ -1.9
FDFT1P37268 RNU6-610P-201ENST00000384264 107 ntBASIC3.18□□□□□ -1.9
FDFT1P37268 MIR449B-201ENST00000384995 97 ntBASIC3.18□□□□□ -1.9
FDFT1P37268 MIR16-1-201ENST00000385271 89 ntBASIC3.18□□□□□ -1.9
FDFT1P37268 MTND4LP20-201ENST00000402379 270 ntBASIC3.18□□□□□ -1.9
FDFT1P37268 AL121978.1-201ENST00000402778 359 ntBASIC3.18□□□□□ -1.9
FDFT1P37268 AL357075.1-201ENST00000404107 726 ntBASIC3.18□□□□□ -1.9
FDFT1P37268 AL591034.1-201ENST00000407447 340 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms