Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SCN4AP35499 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SCN4AP35499 RNU6-152P-201ENST00000384037 107 ntBASIC3.11□□□□□ -1.91
SCN4AP35499 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SCN4AP35499 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.11□□□□□ -1.91
SCN4AP35499 AL031736.2-201ENST00000426573 787 ntBASIC3.11□□□□□ -1.91
SCN4AP35499 AC069277.2-201ENST00000454211 432 ntBASIC3.11□□□□□ -1.91
SCN4AP35499 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.11□□□□□ -1.91
SCN4AP35499 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.11□□□□□ -1.91
SCN4AP35499 AC010928.3-201ENST00000587712 541 ntBASIC3.11□□□□□ -1.91
SCN4AP35499 AC145207.9-201ENST00000623802 325 ntBASIC3.11□□□□□ -1.91
SCN4AP35499 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SCN4AP35499 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
SCN4AP35499 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.11□□□□□ -1.91
SCN4AP35499 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.1□□□□□ -1.91
SCN4AP35499 AC087565.3-202ENST00000642085 1603 ntBASIC3.1□□□□□ -1.91
SCN4AP35499 AC016717.2-201ENST00000609089 5141 ntBASIC3.1□□□□□ -1.91
SCN4AP35499 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC3.1□□□□□ -1.91
SCN4AP35499 SNORD114-30-201ENST00000364448 72 ntBASIC3.1□□□□□ -1.91
SCN4AP35499 MTCYBP7-201ENST00000419540 1134 ntBASIC3.1□□□□□ -1.91
SCN4AP35499 NANOGP5-201ENST00000424456 877 ntBASIC3.1□□□□□ -1.91
SCN4AP35499 AC244505.4-201ENST00000434905 287 ntBASIC3.1□□□□□ -1.91
SCN4AP35499 SSXP5-201ENST00000443473 287 ntBASIC3.1□□□□□ -1.91
SCN4AP35499 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.1□□□□□ -1.91
SCN4AP35499 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.1□□□□□ -1.91
SCN4AP35499 NPM1P35-201ENST00000533043 868 ntBASIC3.1□□□□□ -1.91
SCN4AP35499 MTCO3P13-201ENST00000577757 781 ntBASIC3.1□□□□□ -1.91
SCN4AP35499 BX322635.1-201ENST00000605804 496 ntBASIC3.1□□□□□ -1.91
SCN4AP35499 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.1□□□□□ -1.91
SCN4AP35499 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SCN4AP35499 AC002543.1-201ENST00000299783 1954 ntBASIC3.1□□□□□ -1.91
SCN4AP35499 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.1□□□□□ -1.91
SCN4AP35499 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.1□□□□□ -1.91
SCN4AP35499 AC117529.2-201ENST00000512159 2068 ntBASIC3.1□□□□□ -1.91
SCN4AP35499 RNU6-76P-201ENST00000384060 104 ntBASIC3.09□□□□□ -1.91
SCN4AP35499 RNU6-225P-201ENST00000384613 103 ntBASIC3.09□□□□□ -1.91
SCN4AP35499 MIR7-1-201ENST00000384871 110 ntBASIC3.09□□□□□ -1.91
SCN4AP35499 RPL31P1-201ENST00000398116 372 ntBASIC3.09□□□□□ -1.91
SCN4AP35499 RNA5SP498-201ENST00000411342 120 ntBASIC3.09□□□□□ -1.91
SCN4AP35499 RPS20P25-201ENST00000412447 352 ntBASIC3.09□□□□□ -1.91
SCN4AP35499 SDCBPP3-201ENST00000419629 891 ntBASIC3.09□□□□□ -1.91
SCN4AP35499 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.09□□□□□ -1.91
SCN4AP35499 HIGD1AP2-201ENST00000446367 280 ntBASIC3.09□□□□□ -1.91
SCN4AP35499 AL627224.1-201ENST00000448334 444 ntBASIC3.09□□□□□ -1.91
SCN4AP35499 AP004217.1-201ENST00000480579 346 ntBASIC3.09□□□□□ -1.91
SCN4AP35499 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.09□□□□□ -1.91
SCN4AP35499 OR8X1P-201ENST00000534542 869 ntBASIC3.09□□□□□ -1.91
SCN4AP35499 HPRT1P3-201ENST00000539521 576 ntBASIC3.09□□□□□ -1.91
SCN4AP35499 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.09□□□□□ -1.91
SCN4AP35499 BNIP3P8-201ENST00000597863 560 ntBASIC3.09□□□□□ -1.91
SCN4AP35499 AC091488.1-201ENST00000604239 660 ntBASIC3.09□□□□□ -1.91
SCN4AP35499 AC008277.2-201ENST00000605196 797 ntBASIC3.09□□□□□ -1.91
SCN4AP35499 AC016727.1-205ENST00000605437 569 ntBASIC3.09□□□□□ -1.91
SCN4AP35499 RMST_5.1-201ENST00000618704 126 ntBASIC3.09□□□□□ -1.91
SCN4AP35499 BX005019.1-201ENST00000561881 1810 ntBASIC3.09□□□□□ -1.91
SCN4AP35499 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SCN4AP35499 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SCN4AP35499 Y_RNA.238-201ENST00000364441 102 ntBASIC3.09□□□□□ -1.92
SCN4AP35499 AC007064.1-201ENST00000412238 351 ntBASIC3.09□□□□□ -1.92
SCN4AP35499 AL512504.1-201ENST00000415494 778 ntBASIC3.09□□□□□ -1.92
SCN4AP35499 AC006020.1-201ENST00000420179 1854 ntBASIC3.09□□□□□ -1.92
SCN4AP35499 TRIM60P13-201ENST00000432350 1283 ntBASIC3.09□□□□□ -1.92
SCN4AP35499 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
SCN4AP35499 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.09□□□□□ -1.92
SCN4AP35499 RPS27AP9-201ENST00000477681 438 ntBASIC3.09□□□□□ -1.92
SCN4AP35499 AP003102.1-201ENST00000525638 661 ntBASIC3.09□□□□□ -1.92
SCN4AP35499 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.09□□□□□ -1.92
SCN4AP35499 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.09□□□□□ -1.92
SCN4AP35499 MIR4635-201ENST00000583759 79 ntBASIC3.09□□□□□ -1.92
SCN4AP35499 NRBF2P1-201ENST00000587407 859 ntBASIC3.09□□□□□ -1.92
SCN4AP35499 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.09□□□□□ -1.92
SCN4AP35499 AL021368.2-201ENST00000606125 5352 ntBASIC3.09□□□□□ -1.92
SCN4AP35499 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
SCN4AP35499 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SCN4AP35499 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SCN4AP35499 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SCN4AP35499 OR4G2P-202ENST00000641004 1759 ntBASIC3.08□□□□□ -1.92
SCN4AP35499 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
SCN4AP35499 Y_RNA.4-201ENST00000362333 112 ntBASIC3.08□□□□□ -1.92
SCN4AP35499 SNORA51.4-201ENST00000364993 124 ntBASIC3.08□□□□□ -1.92
SCN4AP35499 DYNLT3P1-201ENST00000378574 347 ntBASIC3.08□□□□□ -1.92
SCN4AP35499 RNU6-253P-201ENST00000384730 105 ntBASIC3.08□□□□□ -1.92
SCN4AP35499 AL359511.1-201ENST00000402970 211 ntBASIC3.08□□□□□ -1.92
SCN4AP35499 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SCN4AP35499 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
SCN4AP35499 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.08□□□□□ -1.92
SCN4AP35499 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.08□□□□□ -1.92
SCN4AP35499 ZFAND6P1-201ENST00000434138 605 ntBASIC3.08□□□□□ -1.92
SCN4AP35499 AL662791.1-201ENST00000441992 928 ntBASIC3.08□□□□□ -1.92
SCN4AP35499 AC243772.1-201ENST00000451620 410 ntBASIC3.08□□□□□ -1.92
SCN4AP35499 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.08□□□□□ -1.92
SCN4AP35499 MIR4506-201ENST00000584693 77 ntBASIC3.08□□□□□ -1.92
SCN4AP35499 AC012119.1-201ENST00000603184 222 ntBASIC3.08□□□□□ -1.92
SCN4AP35499 AC004696.1-201ENST00000614345 607 ntBASIC3.08□□□□□ -1.92
SCN4AP35499 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.08□□□□□ -1.92
SCN4AP35499 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.08□□□□□ -1.92
SCN4AP35499 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.08□□□□□ -1.92
SCN4AP35499 AC104454.1-201ENST00000421341 1401 ntBASIC3.08□□□□□ -1.92
SCN4AP35499 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.08□□□□□ -1.92
SCN4AP35499 RPL26P37-201ENST00000411983 438 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms