Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC2.77□□□□□ -1.97
COL4A5P29400 U2.15-201ENST00000611544 191 ntBASIC2.77□□□□□ -1.97
COL4A5P29400 AC004241.3-201ENST00000611728 517 ntBASIC2.77□□□□□ -1.97
COL4A5P29400 U2.16-201ENST00000613119 191 ntBASIC2.77□□□□□ -1.97
COL4A5P29400 U2.12-201ENST00000613778 191 ntBASIC2.77□□□□□ -1.97
COL4A5P29400 U2.20-201ENST00000613956 192 ntBASIC2.77□□□□□ -1.97
COL4A5P29400 U2.9-201ENST00000615427 191 ntBASIC2.77□□□□□ -1.97
COL4A5P29400 U2.11-201ENST00000616345 191 ntBASIC2.77□□□□□ -1.97
COL4A5P29400 U2.2-201ENST00000616535 191 ntBASIC2.77□□□□□ -1.97
COL4A5P29400 U2.3-201ENST00000617785 191 ntBASIC2.77□□□□□ -1.97
COL4A5P29400 U2.19-201ENST00000618602 191 ntBASIC2.77□□□□□ -1.97
COL4A5P29400 RNU2-1-201ENST00000618664 191 ntBASIC2.77□□□□□ -1.97
COL4A5P29400 U2.6-201ENST00000619225 191 ntBASIC2.77□□□□□ -1.97
COL4A5P29400 U2.5-201ENST00000619465 191 ntBASIC2.77□□□□□ -1.97
COL4A5P29400 U2.10-201ENST00000620268 191 ntBASIC2.77□□□□□ -1.97
COL4A5P29400 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.77□□□□□ -1.97
COL4A5P29400 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
COL4A5P29400 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
COL4A5P29400 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.76□□□□□ -1.97
COL4A5P29400 MIR7-2-201ENST00000384970 110 ntBASIC2.76□□□□□ -1.97
COL4A5P29400 RNA5SP213-201ENST00000391031 106 ntBASIC2.76□□□□□ -1.97
COL4A5P29400 FAT1P1-201ENST00000406588 507 ntBASIC2.76□□□□□ -1.97
COL4A5P29400 AC098592.2-201ENST00000413158 265 ntBASIC2.76□□□□□ -1.97
COL4A5P29400 AL592045.1-201ENST00000429867 352 ntBASIC2.76□□□□□ -1.97
COL4A5P29400 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2.76□□□□□ -1.97
COL4A5P29400 RPL21P71-201ENST00000465598 459 ntBASIC2.76□□□□□ -1.97
COL4A5P29400 MIR4498-201ENST00000577599 66 ntBASIC2.76□□□□□ -1.97
COL4A5P29400 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.76□□□□□ -1.97
COL4A5P29400 MIR7153-201ENST00000637758 57 ntBASIC2.76□□□□□ -1.97
COL4A5P29400 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
COL4A5P29400 GABPAP-201ENST00000419271 1356 ntBASIC2.76□□□□□ -1.97
COL4A5P29400 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC2.76□□□□□ -1.97
COL4A5P29400 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC2.76□□□□□ -1.97
COL4A5P29400 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
COL4A5P29400 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.76□□□□□ -1.97
COL4A5P29400 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
COL4A5P29400 PHKBP1-201ENST00000450951 1951 ntBASIC2.76□□□□□ -1.97
COL4A5P29400 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
COL4A5P29400 RNU6-1331P-201ENST00000363658 106 ntBASIC2.76□□□□□ -1.97
COL4A5P29400 RPS15AP28-201ENST00000435088 386 ntBASIC2.76□□□□□ -1.97
COL4A5P29400 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC2.76□□□□□ -1.97
COL4A5P29400 MTND6P18-201ENST00000439477 513 ntBASIC2.76□□□□□ -1.97
COL4A5P29400 NPM1P49-201ENST00000448027 714 ntBASIC2.76□□□□□ -1.97
COL4A5P29400 AC107918.3-201ENST00000533272 382 ntBASIC2.76□□□□□ -1.97
COL4A5P29400 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC2.76□□□□□ -1.97
COL4A5P29400 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.76□□□□□ -1.97
COL4A5P29400 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC2.76□□□□□ -1.97
COL4A5P29400 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.76□□□□□ -1.97
COL4A5P29400 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.76□□□□□ -1.97
COL4A5P29400 CR589904.2-201ENST00000612533 440 ntBASIC2.76□□□□□ -1.97
COL4A5P29400 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
COL4A5P29400 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC2.75□□□□□ -1.97
COL4A5P29400 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.75□□□□□ -1.97
COL4A5P29400 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.75□□□□□ -1.97
COL4A5P29400 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
COL4A5P29400 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
COL4A5P29400 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
COL4A5P29400 RNU6-1159P-201ENST00000362933 107 ntBASIC2.75□□□□□ -1.97
COL4A5P29400 Y_RNA.140-201ENST00000363474 103 ntBASIC2.75□□□□□ -1.97
COL4A5P29400 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.75□□□□□ -1.97
COL4A5P29400 SNORA17.3-201ENST00000391159 129 ntBASIC2.75□□□□□ -1.97
COL4A5P29400 MTND4LP13-201ENST00000425022 298 ntBASIC2.75□□□□□ -1.97
COL4A5P29400 AC092427.1-202ENST00000430569 476 ntBASIC2.75□□□□□ -1.97
COL4A5P29400 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC2.75□□□□□ -1.97
COL4A5P29400 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.75□□□□□ -1.97
COL4A5P29400 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.75□□□□□ -1.97
COL4A5P29400 SCARNA17.1-201ENST00000516211 143 ntBASIC2.75□□□□□ -1.97
COL4A5P29400 SCARNA17.2-201ENST00000516334 143 ntBASIC2.75□□□□□ -1.97
COL4A5P29400 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.75□□□□□ -1.97
COL4A5P29400 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.75□□□□□ -1.97
COL4A5P29400 AP003117.2-201ENST00000606010 545 ntBASIC2.75□□□□□ -1.97
COL4A5P29400 SCARNA17.4-201ENST00000614296 143 ntBASIC2.75□□□□□ -1.97
COL4A5P29400 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
COL4A5P29400 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC2.74□□□□□ -1.97
COL4A5P29400 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.74□□□□□ -1.97
COL4A5P29400 SNORA41-201ENST00000384675 132 ntBASIC2.74□□□□□ -1.97
COL4A5P29400 MIR221-201ENST00000385135 110 ntBASIC2.74□□□□□ -1.97
COL4A5P29400 RPL23AP36-201ENST00000413895 458 ntBASIC2.74□□□□□ -1.97
COL4A5P29400 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.74□□□□□ -1.97
COL4A5P29400 RPL36AP33-201ENST00000450395 310 ntBASIC2.74□□□□□ -1.97
COL4A5P29400 RN7SKP210-201ENST00000459176 261 ntBASIC2.74□□□□□ -1.97
COL4A5P29400 AC091179.1-201ENST00000461606 579 ntBASIC2.74□□□□□ -1.97
COL4A5P29400 AC107222.1-201ENST00000510899 637 ntBASIC2.74□□□□□ -1.97
COL4A5P29400 NPM1P52-201ENST00000518264 846 ntBASIC2.74□□□□□ -1.97
COL4A5P29400 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC2.74□□□□□ -1.97
COL4A5P29400 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.74□□□□□ -1.97
COL4A5P29400 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC2.74□□□□□ -1.97
COL4A5P29400 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC2.74□□□□□ -1.97
COL4A5P29400 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.74□□□□□ -1.97
COL4A5P29400 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
COL4A5P29400 MTND5P28-201ENST00000438005 1594 ntBASIC2.74□□□□□ -1.97
COL4A5P29400 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
COL4A5P29400 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC2.73□□□□□ -1.97
COL4A5P29400 Y_RNA.355-201ENST00000365462 98 ntBASIC2.73□□□□□ -1.97
COL4A5P29400 RNA5SP129-201ENST00000410276 118 ntBASIC2.73□□□□□ -1.97
COL4A5P29400 CYCSP49-201ENST00000420810 319 ntBASIC2.73□□□□□ -1.97
COL4A5P29400 AL513175.2-201ENST00000422071 443 ntBASIC2.73□□□□□ -1.97
COL4A5P29400 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
COL4A5P29400 COX6CP2-201ENST00000444980 225 ntBASIC2.73□□□□□ -1.97
COL4A5P29400 HMGB1P48-201ENST00000446155 598 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms