Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 VN1R79P-201ENST00000593540 513 ntBASIC3.37□□□□□ -1.87
SHC1P29353 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.37□□□□□ -1.87
SHC1P29353 AC083899.3-201ENST00000603413 594 ntBASIC3.37□□□□□ -1.87
SHC1P29353 AP003973.1-201ENST00000604639 691 ntBASIC3.37□□□□□ -1.87
SHC1P29353 AL592221.1-201ENST00000605266 382 ntBASIC3.37□□□□□ -1.87
SHC1P29353 AP003117.2-201ENST00000606010 545 ntBASIC3.37□□□□□ -1.87
SHC1P29353 RNU1-30P-201ENST00000606575 163 ntBASIC3.37□□□□□ -1.87
SHC1P29353 AP004247.3-201ENST00000608682 624 ntBASIC3.37□□□□□ -1.87
SHC1P29353 AC004223.4-201ENST00000612426 332 ntBASIC3.37□□□□□ -1.87
SHC1P29353 HULC.1-201ENST00000612720 240 ntBASIC3.37□□□□□ -1.87
SHC1P29353 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SHC1P29353 AC026585.1-201ENST00000619582 524 ntBASIC3.37□□□□□ -1.87
SHC1P29353 AC073348.1-201ENST00000623002 331 ntBASIC3.37□□□□□ -1.87
SHC1P29353 AC098679.5-201ENST00000624394 571 ntBASIC3.37□□□□□ -1.87
SHC1P29353 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.37□□□□□ -1.87
SHC1P29353 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
SHC1P29353 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
SHC1P29353 AC073073.2-201ENST00000609827 2578 ntBASIC3.37□□□□□ -1.87
SHC1P29353 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SHC1P29353 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SHC1P29353 AL390237.1-201ENST00000404226 1415 ntBASIC3.36□□□□□ -1.87
SHC1P29353 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SHC1P29353 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.36□□□□□ -1.87
SHC1P29353 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
SHC1P29353 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.36□□□□□ -1.87
SHC1P29353 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
SHC1P29353 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SHC1P29353 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SHC1P29353 AC007685.1-201ENST00000329806 452 ntBASIC3.36□□□□□ -1.87
SHC1P29353 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SHC1P29353 RNU6-623P-201ENST00000363143 105 ntBASIC3.36□□□□□ -1.87
SHC1P29353 Y_RNA.194-201ENST00000363985 102 ntBASIC3.36□□□□□ -1.87
SHC1P29353 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
SHC1P29353 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SHC1P29353 AC007066.1-201ENST00000392902 381 ntBASIC3.36□□□□□ -1.87
SHC1P29353 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SHC1P29353 AL590704.1-201ENST00000402856 794 ntBASIC3.36□□□□□ -1.87
SHC1P29353 AL031577.2-201ENST00000404133 280 ntBASIC3.36□□□□□ -1.87
SHC1P29353 RNU2-65P-201ENST00000410162 185 ntBASIC3.36□□□□□ -1.87
SHC1P29353 RNU2-42P-201ENST00000410697 113 ntBASIC3.36□□□□□ -1.87
SHC1P29353 SNORA57.3-201ENST00000411095 141 ntBASIC3.36□□□□□ -1.87
SHC1P29353 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.36□□□□□ -1.87
SHC1P29353 AL031779.1-201ENST00000415663 330 ntBASIC3.36□□□□□ -1.87
SHC1P29353 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.36□□□□□ -1.87
SHC1P29353 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.36□□□□□ -1.87
SHC1P29353 DPRXP1-201ENST00000426312 460 ntBASIC3.36□□□□□ -1.87
SHC1P29353 AC017083.1-201ENST00000428093 483 ntBASIC3.36□□□□□ -1.87
SHC1P29353 FTH1P6-201ENST00000430768 320 ntBASIC3.36□□□□□ -1.87
SHC1P29353 AC129850.1-201ENST00000436203 508 ntBASIC3.36□□□□□ -1.87
SHC1P29353 ATP5C1P1-201ENST00000441945 895 ntBASIC3.36□□□□□ -1.87
SHC1P29353 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.36□□□□□ -1.87
SHC1P29353 CDC27P1-201ENST00000445384 715 ntBASIC3.36□□□□□ -1.87
SHC1P29353 MTCO2P25-201ENST00000447065 681 ntBASIC3.36□□□□□ -1.87
SHC1P29353 AP000936.2-201ENST00000447151 681 ntBASIC3.36□□□□□ -1.87
SHC1P29353 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.36□□□□□ -1.87
SHC1P29353 RPL7L1P8-201ENST00000469911 741 ntBASIC3.36□□□□□ -1.87
SHC1P29353 AC007537.2-201ENST00000472093 511 ntBASIC3.36□□□□□ -1.87
SHC1P29353 RPL30P6-201ENST00000475925 342 ntBASIC3.36□□□□□ -1.87
SHC1P29353 AC015724.1-201ENST00000478577 156 ntBASIC3.36□□□□□ -1.87
SHC1P29353 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.36□□□□□ -1.87
SHC1P29353 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.36□□□□□ -1.87
SHC1P29353 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.36□□□□□ -1.87
SHC1P29353 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.36□□□□□ -1.87
SHC1P29353 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.36□□□□□ -1.87
SHC1P29353 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.36□□□□□ -1.87
SHC1P29353 AC005178.1-201ENST00000508392 440 ntBASIC3.36□□□□□ -1.87
SHC1P29353 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.36□□□□□ -1.87
SHC1P29353 AC109445.1-201ENST00000512356 383 ntBASIC3.36□□□□□ -1.87
SHC1P29353 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.36□□□□□ -1.87
SHC1P29353 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
SHC1P29353 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.36□□□□□ -1.87
SHC1P29353 RNU6-1225P-201ENST00000516336 65 ntBASIC3.36□□□□□ -1.87
SHC1P29353 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.36□□□□□ -1.87
SHC1P29353 AC008802.1-201ENST00000519121 791 ntBASIC3.36□□□□□ -1.87
SHC1P29353 AC008562.1-201ENST00000521763 330 ntBASIC3.36□□□□□ -1.87
SHC1P29353 COX6B1P6-201ENST00000522347 255 ntBASIC3.36□□□□□ -1.87
SHC1P29353 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.36□□□□□ -1.87
SHC1P29353 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.36□□□□□ -1.87
SHC1P29353 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.36□□□□□ -1.87
SHC1P29353 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.36□□□□□ -1.87
SHC1P29353 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.36□□□□□ -1.87
SHC1P29353 GTF2IP22-201ENST00000554443 182 ntBASIC3.36□□□□□ -1.87
SHC1P29353 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.36□□□□□ -1.87
SHC1P29353 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.36□□□□□ -1.87
SHC1P29353 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.36□□□□□ -1.87
SHC1P29353 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.36□□□□□ -1.87
SHC1P29353 WISP1-OT1-201ENST00000602893 642 ntBASIC3.36□□□□□ -1.87
SHC1P29353 DUXAP11-201ENST00000603858 526 ntBASIC3.36□□□□□ -1.87
SHC1P29353 AC064872.1-201ENST00000604823 1072 ntBASIC3.36□□□□□ -1.87
SHC1P29353 AC018714.1-201ENST00000605028 208 ntBASIC3.36□□□□□ -1.87
SHC1P29353 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.36□□□□□ -1.87
SHC1P29353 AC073114.1-201ENST00000612027 490 ntBASIC3.36□□□□□ -1.87
SHC1P29353 AC008083.4-201ENST00000615076 444 ntBASIC3.36□□□□□ -1.87
SHC1P29353 AC018926.3-201ENST00000618841 406 ntBASIC3.36□□□□□ -1.87
SHC1P29353 AC039056.2-201ENST00000622261 511 ntBASIC3.36□□□□□ -1.87
SHC1P29353 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.36□□□□□ -1.87
SHC1P29353 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.36□□□□□ -1.87
SHC1P29353 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.36□□□□□ -1.87
SHC1P29353 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SHC1P29353 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms