Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CD40P25942 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.49□□□□□ -1.69
CD40P25942 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.49□□□□□ -1.69
CD40P25942 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.49□□□□□ -1.69
CD40P25942 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.49□□□□□ -1.69
CD40P25942 AC010632.3-201ENST00000611377 369 ntBASIC4.49□□□□□ -1.69
CD40P25942 MIR6130-201ENST00000619419 109 ntBASIC4.49□□□□□ -1.69
CD40P25942 FRG1KP-201ENST00000623592 341 ntBASIC4.49□□□□□ -1.69
CD40P25942 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.49□□□□□ -1.69
CD40P25942 AC055839.1-201ENST00000634467 498 ntBASIC4.49□□□□□ -1.69
CD40P25942 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.49□□□□□ -1.69
CD40P25942 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.49□□□□□ -1.69
CD40P25942 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.49□□□□□ -1.69
CD40P25942 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CD40P25942 AC023421.1-201ENST00000590535 1785 ntBASIC4.49□□□□□ -1.69
CD40P25942 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
CD40P25942 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CD40P25942 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CD40P25942 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CD40P25942 MTND5P3-201ENST00000438536 1800 ntBASIC4.49□□□□□ -1.69
CD40P25942 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CD40P25942 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.48□□□□□ -1.69
CD40P25942 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CD40P25942 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CD40P25942 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
CD40P25942 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CD40P25942 AL034549.2-201ENST00000618285 3373 ntBASIC4.48□□□□□ -1.69
CD40P25942 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.48□□□□□ -1.69
CD40P25942 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CD40P25942 Y_RNA.263-201ENST00000364659 114 ntBASIC4.48□□□□□ -1.69
CD40P25942 RNU6-767P-201ENST00000384132 107 ntBASIC4.48□□□□□ -1.69
CD40P25942 MIR589-201ENST00000385238 99 ntBASIC4.48□□□□□ -1.69
CD40P25942 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.48□□□□□ -1.69
CD40P25942 RPS7P15-201ENST00000415804 584 ntBASIC4.48□□□□□ -1.69
CD40P25942 AL354766.1-201ENST00000423396 542 ntBASIC4.48□□□□□ -1.69
CD40P25942 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.48□□□□□ -1.69
CD40P25942 PSMD10P3-201ENST00000437000 448 ntBASIC4.48□□□□□ -1.69
CD40P25942 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.48□□□□□ -1.69
CD40P25942 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.48□□□□□ -1.69
CD40P25942 AMD1P1-201ENST00000457220 922 ntBASIC4.48□□□□□ -1.69
CD40P25942 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.48□□□□□ -1.69
CD40P25942 AC231760.1-201ENST00000498002 260 ntBASIC4.48□□□□□ -1.69
CD40P25942 RPL38P4-201ENST00000502376 214 ntBASIC4.48□□□□□ -1.69
CD40P25942 MTND3P22-201ENST00000510932 243 ntBASIC4.48□□□□□ -1.69
CD40P25942 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.48□□□□□ -1.69
CD40P25942 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.48□□□□□ -1.69
CD40P25942 PSMA2P1-201ENST00000526365 646 ntBASIC4.48□□□□□ -1.69
CD40P25942 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.48□□□□□ -1.69
CD40P25942 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CD40P25942 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CD40P25942 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CD40P25942 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CD40P25942 MIR4775-201ENST00000581168 75 ntBASIC4.48□□□□□ -1.69
CD40P25942 PRPF19P1-201ENST00000584766 898 ntBASIC4.48□□□□□ -1.69
CD40P25942 AC005261.5-201ENST00000596280 355 ntBASIC4.48□□□□□ -1.69
CD40P25942 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.48□□□□□ -1.69
CD40P25942 XIAPP1-201ENST00000603162 600 ntBASIC4.48□□□□□ -1.69
CD40P25942 AC011626.1-201ENST00000604710 562 ntBASIC4.48□□□□□ -1.69
CD40P25942 AL022394.1-201ENST00000606979 292 ntBASIC4.48□□□□□ -1.69
CD40P25942 AC133644.2-201ENST00000608142 540 ntBASIC4.48□□□□□ -1.69
CD40P25942 AC093799.2-201ENST00000610062 578 ntBASIC4.48□□□□□ -1.69
CD40P25942 EIF3FP1-201ENST00000613970 806 ntBASIC4.48□□□□□ -1.69
CD40P25942 AC130324.3-201ENST00000614165 542 ntBASIC4.48□□□□□ -1.69
CD40P25942 AL450472.3-201ENST00000615578 367 ntBASIC4.48□□□□□ -1.69
CD40P25942 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.48□□□□□ -1.69
CD40P25942 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CD40P25942 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CD40P25942 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CD40P25942 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CD40P25942 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CD40P25942 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.48□□□□□ -1.69
CD40P25942 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CD40P25942 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.48□□□□□ -1.69
CD40P25942 AC104118.1-201ENST00000607625 1589 ntBASIC4.48□□□□□ -1.69
CD40P25942 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.47□□□□□ -1.69
CD40P25942 AC108751.5-201ENST00000492880 1336 ntBASIC4.47□□□□□ -1.69
CD40P25942 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CD40P25942 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CD40P25942 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.47□□□□□ -1.69
CD40P25942 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.47□□□□□ -1.69
CD40P25942 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.47□□□□□ -1.69
CD40P25942 MTND5P17-201ENST00000418405 1603 ntBASIC4.47□□□□□ -1.69
CD40P25942 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.47□□□□□ -1.69
CD40P25942 DDX18P3-201ENST00000404856 2007 ntBASIC4.47□□□□□ -1.69
CD40P25942 AC067945.1-201ENST00000342609 618 ntBASIC4.47□□□□□ -1.69
CD40P25942 MIR133A2-201ENST00000347538 102 ntBASIC4.47□□□□□ -1.69
CD40P25942 RN7SKP145-201ENST00000363291 303 ntBASIC4.47□□□□□ -1.69
CD40P25942 RNU6-179P-201ENST00000363350 107 ntBASIC4.47□□□□□ -1.69
CD40P25942 RNU6-1284P-201ENST00000363701 100 ntBASIC4.47□□□□□ -1.69
CD40P25942 RNU6-1029P-201ENST00000384109 107 ntBASIC4.47□□□□□ -1.69
CD40P25942 RNU6-332P-201ENST00000391193 108 ntBASIC4.47□□□□□ -1.69
CD40P25942 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.47□□□□□ -1.69
CD40P25942 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CD40P25942 AC099677.1-201ENST00000420575 175 ntBASIC4.47□□□□□ -1.69
CD40P25942 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.47□□□□□ -1.69
CD40P25942 RPL7AP49-201ENST00000429522 581 ntBASIC4.47□□□□□ -1.69
CD40P25942 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.47□□□□□ -1.69
CD40P25942 AL591438.1-201ENST00000433508 581 ntBASIC4.47□□□□□ -1.69
CD40P25942 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.47□□□□□ -1.69
CD40P25942 AC004866.2-201ENST00000438285 481 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms