Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 AC108078.2-201ENST00000510750 236 ntBASIC5.42□□□□□ -1.54
NID1P14543 RN7SKP238-201ENST00000516483 249 ntBASIC5.42□□□□□ -1.54
NID1P14543 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.42□□□□□ -1.54
NID1P14543 RNU6-323P-201ENST00000521915 107 ntBASIC5.42□□□□□ -1.54
NID1P14543 AC007991.1-201ENST00000522680 631 ntBASIC5.42□□□□□ -1.54
NID1P14543 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.42□□□□□ -1.54
NID1P14543 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.42□□□□□ -1.54
NID1P14543 AC026371.1-201ENST00000551867 419 ntBASIC5.42□□□□□ -1.54
NID1P14543 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.42□□□□□ -1.54
NID1P14543 AC068446.3-201ENST00000555285 382 ntBASIC5.42□□□□□ -1.54
NID1P14543 AC012433.1-201ENST00000588916 398 ntBASIC5.42□□□□□ -1.54
NID1P14543 AC060780.2-201ENST00000589047 198 ntBASIC5.42□□□□□ -1.54
NID1P14543 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NID1P14543 AL136131.3-201ENST00000607600 188 ntBASIC5.42□□□□□ -1.54
NID1P14543 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.42□□□□□ -1.54
NID1P14543 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.42□□□□□ -1.54
NID1P14543 AL136228.1-201ENST00000622221 319 ntBASIC5.42□□□□□ -1.54
NID1P14543 AL136313.1-201ENST00000624804 202 ntBASIC5.42□□□□□ -1.54
NID1P14543 AC091925.2-201ENST00000625059 256 ntBASIC5.42□□□□□ -1.54
NID1P14543 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
NID1P14543 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NID1P14543 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NID1P14543 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NID1P14543 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NID1P14543 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.42□□□□□ -1.54
NID1P14543 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.42□□□□□ -1.54
NID1P14543 AL592148.3-201ENST00000608771 2646 ntBASIC5.42□□□□□ -1.54
NID1P14543 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NID1P14543 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NID1P14543 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
NID1P14543 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
NID1P14543 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
NID1P14543 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NID1P14543 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
NID1P14543 AP001284.1-201ENST00000528393 2118 ntBASIC5.41□□□□□ -1.54
NID1P14543 AC009313.2-201ENST00000417893 1941 ntBASIC5.41□□□□□ -1.54
NID1P14543 MSL3P1-202ENST00000440028 1468 ntBASIC5.41□□□□□ -1.54
NID1P14543 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NID1P14543 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NID1P14543 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.41□□□□□ -1.54
NID1P14543 Y_RNA.19-201ENST00000362462 99 ntBASIC5.41□□□□□ -1.54
NID1P14543 SNORD27-201ENST00000363981 72 ntBASIC5.41□□□□□ -1.54
NID1P14543 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.41□□□□□ -1.54
NID1P14543 Y_RNA.399-201ENST00000383955 105 ntBASIC5.41□□□□□ -1.54
NID1P14543 Y_RNA.416-201ENST00000384014 113 ntBASIC5.41□□□□□ -1.54
NID1P14543 SNORD70.1-201ENST00000391007 85 ntBASIC5.41□□□□□ -1.54
NID1P14543 RPL11P3-201ENST00000395256 523 ntBASIC5.41□□□□□ -1.54
NID1P14543 AC097374.1-203ENST00000400783 485 ntBASIC5.41□□□□□ -1.54
NID1P14543 AL445189.1-201ENST00000405722 338 ntBASIC5.41□□□□□ -1.54
NID1P14543 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.41□□□□□ -1.54
NID1P14543 RPL21P109-201ENST00000422213 475 ntBASIC5.41□□□□□ -1.54
NID1P14543 CRIP1P1-201ENST00000427567 185 ntBASIC5.41□□□□□ -1.54
NID1P14543 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.41□□□□□ -1.54
NID1P14543 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.41□□□□□ -1.54
NID1P14543 NEFMP1-201ENST00000443423 1006 ntBASIC5.41□□□□□ -1.54
NID1P14543 NOTCH2P1-201ENST00000443481 624 ntBASIC5.41□□□□□ -1.54
NID1P14543 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NID1P14543 AC005077.1-201ENST00000449226 375 ntBASIC5.41□□□□□ -1.54
NID1P14543 GEMIN2P1-201ENST00000454246 752 ntBASIC5.41□□□□□ -1.54
NID1P14543 PCMTD1P1-201ENST00000455560 355 ntBASIC5.41□□□□□ -1.54
NID1P14543 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.41□□□□□ -1.54
NID1P14543 RNU7-167P-201ENST00000459160 62 ntBASIC5.41□□□□□ -1.54
NID1P14543 RNU1-88P-201ENST00000459274 128 ntBASIC5.41□□□□□ -1.54
NID1P14543 AC087879.1-201ENST00000474343 374 ntBASIC5.41□□□□□ -1.54
NID1P14543 TRBVB-201ENST00000477100 408 ntBASIC5.41□□□□□ -1.54
NID1P14543 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.41□□□□□ -1.54
NID1P14543 AC005726.1-201ENST00000494679 427 ntBASIC5.41□□□□□ -1.54
NID1P14543 CEACAMP10-202ENST00000495431 496 ntBASIC5.41□□□□□ -1.54
NID1P14543 AC083829.1-201ENST00000503756 657 ntBASIC5.41□□□□□ -1.54
NID1P14543 AC093767.1-201ENST00000504523 156 ntBASIC5.41□□□□□ -1.54
NID1P14543 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.41□□□□□ -1.54
NID1P14543 AC025458.1-201ENST00000506046 166 ntBASIC5.41□□□□□ -1.54
NID1P14543 AC096745.1-201ENST00000509945 370 ntBASIC5.41□□□□□ -1.54
NID1P14543 RNU6-570P-201ENST00000517051 105 ntBASIC5.41□□□□□ -1.54
NID1P14543 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC5.41□□□□□ -1.54
NID1P14543 AC079600.1-201ENST00000550326 297 ntBASIC5.41□□□□□ -1.54
NID1P14543 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.41□□□□□ -1.54
NID1P14543 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.41□□□□□ -1.54
NID1P14543 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NID1P14543 AC130289.1-201ENST00000577321 73 ntBASIC5.41□□□□□ -1.54
NID1P14543 MIR4443-201ENST00000585052 53 ntBASIC5.41□□□□□ -1.54
NID1P14543 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.41□□□□□ -1.54
NID1P14543 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC5.41□□□□□ -1.54
NID1P14543 RAC1P9-201ENST00000604990 392 ntBASIC5.41□□□□□ -1.54
NID1P14543 AC012443.1-201ENST00000605605 231 ntBASIC5.41□□□□□ -1.54
NID1P14543 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.41□□□□□ -1.54
NID1P14543 AL133481.2-203ENST00000607558 139 ntBASIC5.41□□□□□ -1.54
NID1P14543 AC023813.4-201ENST00000607580 580 ntBASIC5.41□□□□□ -1.54
NID1P14543 AC009570.1-201ENST00000609599 745 ntBASIC5.41□□□□□ -1.54
NID1P14543 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.41□□□□□ -1.54
NID1P14543 AL139099.4-201ENST00000614802 114 ntBASIC5.41□□□□□ -1.54
NID1P14543 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NID1P14543 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.41□□□□□ -1.54
NID1P14543 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NID1P14543 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
NID1P14543 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NID1P14543 AL445437.1-201ENST00000623157 3087 ntBASIC5.41□□□□□ -1.54
NID1P14543 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.41□□□□□ -1.54
NID1P14543 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
NID1P14543 AC130650.2-201ENST00000618736 2403 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms