Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 OR5H2-201ENST00000355273 945 ntBASIC3.02□□□□□ -1.93
THRAP10827 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
THRAP10827 RNU6-1339P-201ENST00000363574 91 ntBASIC3.02□□□□□ -1.93
THRAP10827 RNA5SP27-201ENST00000363839 119 ntBASIC3.02□□□□□ -1.93
THRAP10827 RNU6-1243P-201ENST00000364028 107 ntBASIC3.02□□□□□ -1.93
THRAP10827 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
THRAP10827 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
THRAP10827 RPL5P18-201ENST00000406671 891 ntBASIC3.02□□□□□ -1.93
THRAP10827 SNORA11.2-201ENST00000408318 127 ntBASIC3.02□□□□□ -1.93
THRAP10827 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.02□□□□□ -1.93
THRAP10827 RPL35AP12-201ENST00000425362 338 ntBASIC3.02□□□□□ -1.93
THRAP10827 VDAC1P3-201ENST00000434069 851 ntBASIC3.02□□□□□ -1.93
THRAP10827 ZFAND6P1-201ENST00000434138 605 ntBASIC3.02□□□□□ -1.93
THRAP10827 YWHAZP7-201ENST00000436906 631 ntBASIC3.02□□□□□ -1.93
THRAP10827 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.02□□□□□ -1.93
THRAP10827 AC004865.1-201ENST00000442276 1003 ntBASIC3.02□□□□□ -1.93
THRAP10827 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.02□□□□□ -1.93
THRAP10827 RPL21P8-201ENST00000465083 535 ntBASIC3.02□□□□□ -1.93
THRAP10827 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.02□□□□□ -1.93
THRAP10827 AP004217.1-201ENST00000480579 346 ntBASIC3.02□□□□□ -1.93
THRAP10827 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.02□□□□□ -1.93
THRAP10827 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
THRAP10827 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
THRAP10827 AC016065.2-201ENST00000514530 444 ntBASIC3.02□□□□□ -1.93
THRAP10827 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.02□□□□□ -1.93
THRAP10827 RNA5SP76-201ENST00000516277 87 ntBASIC3.02□□□□□ -1.93
THRAP10827 AC090136.1-201ENST00000520009 240 ntBASIC3.02□□□□□ -1.93
THRAP10827 AF279873.1-201ENST00000523393 313 ntBASIC3.02□□□□□ -1.93
THRAP10827 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.02□□□□□ -1.93
THRAP10827 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.02□□□□□ -1.93
THRAP10827 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.02□□□□□ -1.93
THRAP10827 AC007566.2-201ENST00000603642 413 ntBASIC3.02□□□□□ -1.93
THRAP10827 FRG1HP-204ENST00000617940 757 ntBASIC3.02□□□□□ -1.93
THRAP10827 AC073348.1-201ENST00000623002 331 ntBASIC3.02□□□□□ -1.93
THRAP10827 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
THRAP10827 AL136164.4-201ENST00000625013 2135 ntBASIC3.02□□□□□ -1.93
THRAP10827 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
THRAP10827 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.02□□□□□ -1.93
THRAP10827 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.02□□□□□ -1.93
THRAP10827 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
THRAP10827 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
THRAP10827 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
THRAP10827 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
THRAP10827 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
THRAP10827 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
THRAP10827 SNORA80A-201ENST00000363922 136 ntBASIC3.01□□□□□ -1.93
THRAP10827 SNORA54-201ENST00000384281 123 ntBASIC3.01□□□□□ -1.93
THRAP10827 NPM1P10-201ENST00000398310 865 ntBASIC3.01□□□□□ -1.93
THRAP10827 DSTNP4-201ENST00000399472 474 ntBASIC3.01□□□□□ -1.93
THRAP10827 AC110754.1-201ENST00000399740 601 ntBASIC3.01□□□□□ -1.93
THRAP10827 RNU2-71P-201ENST00000411395 189 ntBASIC3.01□□□□□ -1.93
THRAP10827 MTCYBP24-201ENST00000420387 1106 ntBASIC3.01□□□□□ -1.93
THRAP10827 AC244098.2-201ENST00000422068 99 ntBASIC3.01□□□□□ -1.93
THRAP10827 AC005517.2-201ENST00000424673 553 ntBASIC3.01□□□□□ -1.93
THRAP10827 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.01□□□□□ -1.93
THRAP10827 FABP5P3-201ENST00000437960 408 ntBASIC3.01□□□□□ -1.93
THRAP10827 AC107083.1-201ENST00000439643 279 ntBASIC3.01□□□□□ -1.93
THRAP10827 RPS26P56-201ENST00000444468 240 ntBASIC3.01□□□□□ -1.93
THRAP10827 SSXP4-201ENST00000451349 245 ntBASIC3.01□□□□□ -1.93
THRAP10827 AL035407.2-201ENST00000454090 378 ntBASIC3.01□□□□□ -1.93
THRAP10827 RN7SL633P-201ENST00000488974 297 ntBASIC3.01□□□□□ -1.93
THRAP10827 AC096576.1-201ENST00000489014 359 ntBASIC3.01□□□□□ -1.93
THRAP10827 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.01□□□□□ -1.93
THRAP10827 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
THRAP10827 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.01□□□□□ -1.93
THRAP10827 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.01□□□□□ -1.93
THRAP10827 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.01□□□□□ -1.93
THRAP10827 H3F3AP1-201ENST00000559984 334 ntBASIC3.01□□□□□ -1.93
THRAP10827 MTCYBP28-201ENST00000566728 1132 ntBASIC3.01□□□□□ -1.93
THRAP10827 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.01□□□□□ -1.93
THRAP10827 SNRPGP15-201ENST00000600149 222 ntBASIC3.01□□□□□ -1.93
THRAP10827 AL133393.1-201ENST00000603277 287 ntBASIC3.01□□□□□ -1.93
THRAP10827 U73479.1-201ENST00000618062 168 ntBASIC3.01□□□□□ -1.93
THRAP10827 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
THRAP10827 AP003400.6-201ENST00000624698 740 ntBASIC3.01□□□□□ -1.93
THRAP10827 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
THRAP10827 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
THRAP10827 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.01□□□□□ -1.93
THRAP10827 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3□□□□□ -1.93
THRAP10827 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
THRAP10827 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3□□□□□ -1.93
THRAP10827 AC016716.1-201ENST00000265882 708 ntBASIC3□□□□□ -1.93
THRAP10827 SAR1AP2-201ENST00000392696 594 ntBASIC3□□□□□ -1.93
THRAP10827 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3□□□□□ -1.93
THRAP10827 AL354719.1-201ENST00000406535 843 ntBASIC3□□□□□ -1.93
THRAP10827 AL031121.1-201ENST00000406553 254 ntBASIC3□□□□□ -1.93
THRAP10827 AL139281.1-201ENST00000422120 335 ntBASIC3□□□□□ -1.93
THRAP10827 MORF4L1P7-201ENST00000426038 703 ntBASIC3□□□□□ -1.93
THRAP10827 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3□□□□□ -1.93
THRAP10827 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3□□□□□ -1.93
THRAP10827 AC093422.3-201ENST00000428506 305 ntBASIC3□□□□□ -1.93
THRAP10827 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3□□□□□ -1.93
THRAP10827 PTP4A1P3-201ENST00000433661 420 ntBASIC3□□□□□ -1.93
THRAP10827 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3□□□□□ -1.93
THRAP10827 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3□□□□□ -1.93
THRAP10827 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3□□□□□ -1.93
THRAP10827 LAMTOR5P1-201ENST00000444290 270 ntBASIC3□□□□□ -1.93
THRAP10827 AC016696.1-201ENST00000446949 318 ntBASIC3□□□□□ -1.93
THRAP10827 RPL7P52-201ENST00000449200 742 ntBASIC3□□□□□ -1.93
THRAP10827 RPS15AP1-201ENST00000457423 391 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms