Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC023128.2-201ENST00000420880 1223 ntBASIC3.13□□□□□ -1.91
CTDNEP1O95476 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.13□□□□□ -1.91
CTDNEP1O95476 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.13□□□□□ -1.91
CTDNEP1O95476 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.13□□□□□ -1.91
CTDNEP1O95476 AC087499.2-201ENST00000432861 149 ntBASIC3.13□□□□□ -1.91
CTDNEP1O95476 RPS3AP12-201ENST00000443616 753 ntBASIC3.13□□□□□ -1.91
CTDNEP1O95476 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.13□□□□□ -1.91
CTDNEP1O95476 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.13□□□□□ -1.91
CTDNEP1O95476 GSTA11P-201ENST00000452866 669 ntBASIC3.13□□□□□ -1.91
CTDNEP1O95476 CACYBPP2-201ENST00000453625 678 ntBASIC3.13□□□□□ -1.91
CTDNEP1O95476 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.13□□□□□ -1.91
CTDNEP1O95476 RPL23AP11-201ENST00000475260 469 ntBASIC3.13□□□□□ -1.91
CTDNEP1O95476 RPL31P13-201ENST00000484151 370 ntBASIC3.13□□□□□ -1.91
CTDNEP1O95476 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CTDNEP1O95476 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.13□□□□□ -1.91
CTDNEP1O95476 AC005351.1-201ENST00000511152 786 ntBASIC3.13□□□□□ -1.91
CTDNEP1O95476 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.13□□□□□ -1.91
CTDNEP1O95476 OR4R2P-201ENST00000530815 597 ntBASIC3.13□□□□□ -1.91
CTDNEP1O95476 OR8L1P-201ENST00000534005 955 ntBASIC3.13□□□□□ -1.91
CTDNEP1O95476 OR6C73P-201ENST00000546432 358 ntBASIC3.13□□□□□ -1.91
CTDNEP1O95476 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.13□□□□□ -1.91
CTDNEP1O95476 AC079148.1-201ENST00000565944 819 ntBASIC3.13□□□□□ -1.91
CTDNEP1O95476 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.13□□□□□ -1.91
CTDNEP1O95476 AC023043.3-201ENST00000593113 385 ntBASIC3.13□□□□□ -1.91
CTDNEP1O95476 AC245100.7-201ENST00000609678 442 ntBASIC3.13□□□□□ -1.91
CTDNEP1O95476 AP001033.2-201ENST00000609701 1003 ntBASIC3.13□□□□□ -1.91
CTDNEP1O95476 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.13□□□□□ -1.91
CTDNEP1O95476 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CTDNEP1O95476 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CTDNEP1O95476 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
CTDNEP1O95476 DYNLT3P1-201ENST00000378574 347 ntBASIC3.12□□□□□ -1.91
CTDNEP1O95476 MIR607-201ENST00000385241 96 ntBASIC3.12□□□□□ -1.91
CTDNEP1O95476 SNORA48.8-201ENST00000391324 134 ntBASIC3.12□□□□□ -1.91
CTDNEP1O95476 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.12□□□□□ -1.91
CTDNEP1O95476 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.12□□□□□ -1.91
CTDNEP1O95476 RPL7P44-201ENST00000424827 742 ntBASIC3.12□□□□□ -1.91
CTDNEP1O95476 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.12□□□□□ -1.91
CTDNEP1O95476 RPL23AP74-201ENST00000437246 471 ntBASIC3.12□□□□□ -1.91
CTDNEP1O95476 AC006994.1-201ENST00000438212 839 ntBASIC3.12□□□□□ -1.91
CTDNEP1O95476 RPL36AP33-201ENST00000450395 310 ntBASIC3.12□□□□□ -1.91
CTDNEP1O95476 HMGB1P25-201ENST00000468402 607 ntBASIC3.12□□□□□ -1.91
CTDNEP1O95476 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.12□□□□□ -1.91
CTDNEP1O95476 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.12□□□□□ -1.91
CTDNEP1O95476 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.12□□□□□ -1.91
CTDNEP1O95476 AC010265.1-201ENST00000513509 211 ntBASIC3.12□□□□□ -1.91
CTDNEP1O95476 AC133963.2-201ENST00000513686 578 ntBASIC3.12□□□□□ -1.91
CTDNEP1O95476 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.12□□□□□ -1.91
CTDNEP1O95476 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.12□□□□□ -1.91
CTDNEP1O95476 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CTDNEP1O95476 MTND1P36-201ENST00000522384 936 ntBASIC3.12□□□□□ -1.91
CTDNEP1O95476 GTF2IP8-201ENST00000560687 584 ntBASIC3.12□□□□□ -1.91
CTDNEP1O95476 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.12□□□□□ -1.91
CTDNEP1O95476 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.12□□□□□ -1.91
CTDNEP1O95476 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.12□□□□□ -1.91
CTDNEP1O95476 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.12□□□□□ -1.91
CTDNEP1O95476 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.12□□□□□ -1.91
CTDNEP1O95476 U6.48-201ENST00000618523 106 ntBASIC3.12□□□□□ -1.91
CTDNEP1O95476 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CTDNEP1O95476 AL137790.1-201ENST00000634283 177 ntBASIC3.12□□□□□ -1.91
CTDNEP1O95476 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CTDNEP1O95476 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
CTDNEP1O95476 DNAJC19P6-201ENST00000401853 280 ntBASIC3.11□□□□□ -1.91
CTDNEP1O95476 RNU2-17P-201ENST00000410290 190 ntBASIC3.11□□□□□ -1.91
CTDNEP1O95476 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.11□□□□□ -1.91
CTDNEP1O95476 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC3.11□□□□□ -1.91
CTDNEP1O95476 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.11□□□□□ -1.91
CTDNEP1O95476 PTP4A1P3-201ENST00000433661 420 ntBASIC3.11□□□□□ -1.91
CTDNEP1O95476 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.11□□□□□ -1.91
CTDNEP1O95476 HMGB1P12-201ENST00000438594 598 ntBASIC3.11□□□□□ -1.91
CTDNEP1O95476 AC107083.1-201ENST00000439643 279 ntBASIC3.11□□□□□ -1.91
CTDNEP1O95476 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.11□□□□□ -1.91
CTDNEP1O95476 AC078857.1-201ENST00000469870 667 ntBASIC3.11□□□□□ -1.91
CTDNEP1O95476 AL136126.1-201ENST00000473603 402 ntBASIC3.11□□□□□ -1.91
CTDNEP1O95476 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CTDNEP1O95476 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.11□□□□□ -1.91
CTDNEP1O95476 GMPSP1-201ENST00000514075 579 ntBASIC3.11□□□□□ -1.91
CTDNEP1O95476 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.11□□□□□ -1.91
CTDNEP1O95476 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.11□□□□□ -1.91
CTDNEP1O95476 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.11□□□□□ -1.91
CTDNEP1O95476 AC011374.2-201ENST00000607135 526 ntBASIC3.11□□□□□ -1.91
CTDNEP1O95476 AC110792.4-201ENST00000609843 298 ntBASIC3.11□□□□□ -1.91
CTDNEP1O95476 AP000720.1-201ENST00000625091 483 ntBASIC3.11□□□□□ -1.91
CTDNEP1O95476 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CTDNEP1O95476 AL161431.1-201ENST00000618966 4205 ntBASIC3.11□□□□□ -1.91
CTDNEP1O95476 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CTDNEP1O95476 TAB3P1-202ENST00000452645 1634 ntBASIC3.11□□□□□ -1.91
CTDNEP1O95476 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CTDNEP1O95476 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CTDNEP1O95476 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CTDNEP1O95476 AL079305.1-201ENST00000623159 3008 ntBASIC3.1□□□□□ -1.91
CTDNEP1O95476 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CTDNEP1O95476 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CTDNEP1O95476 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CTDNEP1O95476 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CTDNEP1O95476 AL360182.1-201ENST00000397433 468 ntBASIC3.1□□□□□ -1.91
CTDNEP1O95476 ATP5F1P6-201ENST00000402768 767 ntBASIC3.1□□□□□ -1.91
CTDNEP1O95476 RPL23AP47-201ENST00000408017 460 ntBASIC3.1□□□□□ -1.91
CTDNEP1O95476 AL158050.1-201ENST00000416077 457 ntBASIC3.1□□□□□ -1.91
CTDNEP1O95476 AL121882.1-201ENST00000422893 417 ntBASIC3.1□□□□□ -1.91
CTDNEP1O95476 MTCO2P1-201ENST00000424648 477 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms