Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 AC087879.1-201ENST00000474343 374 ntBASIC3.84□□□□□ -1.79
LDB3O75112 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.84□□□□□ -1.79
LDB3O75112 MTCYBP17-201ENST00000503579 789 ntBASIC3.84□□□□□ -1.79
LDB3O75112 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.84□□□□□ -1.79
LDB3O75112 AC025554.1-201ENST00000505641 188 ntBASIC3.84□□□□□ -1.79
LDB3O75112 ARL2BPP4-201ENST00000506854 471 ntBASIC3.84□□□□□ -1.79
LDB3O75112 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.84□□□□□ -1.79
LDB3O75112 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.84□□□□□ -1.79
LDB3O75112 AC008549.1-201ENST00000512900 643 ntBASIC3.84□□□□□ -1.79
LDB3O75112 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.84□□□□□ -1.79
LDB3O75112 RN7SKP277-201ENST00000516895 283 ntBASIC3.84□□□□□ -1.79
LDB3O75112 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.84□□□□□ -1.79
LDB3O75112 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.84□□□□□ -1.79
LDB3O75112 AC239860.2-201ENST00000525886 270 ntBASIC3.84□□□□□ -1.79
LDB3O75112 MED28P5-201ENST00000528254 438 ntBASIC3.84□□□□□ -1.79
LDB3O75112 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.84□□□□□ -1.79
LDB3O75112 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LDB3O75112 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
LDB3O75112 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.84□□□□□ -1.79
LDB3O75112 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.84□□□□□ -1.79
LDB3O75112 AC068135.2-201ENST00000569293 1028 ntBASIC3.84□□□□□ -1.79
LDB3O75112 AC025627.2-201ENST00000576220 160 ntBASIC3.84□□□□□ -1.79
LDB3O75112 MIR5684-201ENST00000585074 65 ntBASIC3.84□□□□□ -1.79
LDB3O75112 AC020914.6-201ENST00000594327 272 ntBASIC3.84□□□□□ -1.79
LDB3O75112 AC012065.4-201ENST00000602445 679 ntBASIC3.84□□□□□ -1.79
LDB3O75112 AP000403.1-201ENST00000603349 851 ntBASIC3.84□□□□□ -1.79
LDB3O75112 AC010680.3-201ENST00000604215 520 ntBASIC3.84□□□□□ -1.79
LDB3O75112 AC067959.1-201ENST00000604334 379 ntBASIC3.84□□□□□ -1.79
LDB3O75112 AC068276.1-201ENST00000605793 379 ntBASIC3.84□□□□□ -1.79
LDB3O75112 AL357078.3-201ENST00000607528 618 ntBASIC3.84□□□□□ -1.79
LDB3O75112 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LDB3O75112 AC026368.1-201ENST00000614934 690 ntBASIC3.84□□□□□ -1.79
LDB3O75112 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.84□□□□□ -1.79
LDB3O75112 AC231657.1-201ENST00000624313 397 ntBASIC3.84□□□□□ -1.79
LDB3O75112 AC008785.1-201ENST00000624475 456 ntBASIC3.84□□□□□ -1.79
LDB3O75112 AP005264.7-201ENST00000625003 745 ntBASIC3.84□□□□□ -1.79
LDB3O75112 AC025048.6-202ENST00000627667 438 ntBASIC3.84□□□□□ -1.79
LDB3O75112 MIR492-201ENST00000638676 116 ntBASIC3.84□□□□□ -1.79
LDB3O75112 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LDB3O75112 MARK2P15-201ENST00000432204 2186 ntBASIC3.84□□□□□ -1.79
LDB3O75112 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.84□□□□□ -1.79
LDB3O75112 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LDB3O75112 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.84□□□□□ -1.79
LDB3O75112 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
LDB3O75112 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
LDB3O75112 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.84□□□□□ -1.8
LDB3O75112 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.84□□□□□ -1.8
LDB3O75112 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
LDB3O75112 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.84□□□□□ -1.8
LDB3O75112 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.84□□□□□ -1.8
LDB3O75112 ZNF962P-201ENST00000443465 3140 ntBASIC3.84□□□□□ -1.8
LDB3O75112 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.83□□□□□ -1.8
LDB3O75112 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
LDB3O75112 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LDB3O75112 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LDB3O75112 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
LDB3O75112 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.83□□□□□ -1.8
LDB3O75112 RNU6-1243P-201ENST00000364028 107 ntBASIC3.83□□□□□ -1.8
LDB3O75112 RNU6-657P-201ENST00000383904 107 ntBASIC3.83□□□□□ -1.8
LDB3O75112 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LDB3O75112 BTBD10P2-201ENST00000404779 676 ntBASIC3.83□□□□□ -1.8
LDB3O75112 RAP1BP3-201ENST00000407180 549 ntBASIC3.83□□□□□ -1.8
LDB3O75112 OR8G2P-201ENST00000412796 908 ntBASIC3.83□□□□□ -1.8
LDB3O75112 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LDB3O75112 RPL23AP39-201ENST00000415533 405 ntBASIC3.83□□□□□ -1.8
LDB3O75112 AL356095.1-201ENST00000417217 199 ntBASIC3.83□□□□□ -1.8
LDB3O75112 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LDB3O75112 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.83□□□□□ -1.8
LDB3O75112 AC092427.1-201ENST00000439177 601 ntBASIC3.83□□□□□ -1.8
LDB3O75112 MTND4P25-201ENST00000441039 533 ntBASIC3.83□□□□□ -1.8
LDB3O75112 RPL23AP16-201ENST00000441715 421 ntBASIC3.83□□□□□ -1.8
LDB3O75112 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.83□□□□□ -1.8
LDB3O75112 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.83□□□□□ -1.8
LDB3O75112 AL592447.1-201ENST00000447592 540 ntBASIC3.83□□□□□ -1.8
LDB3O75112 AC114755.5-201ENST00000447760 831 ntBASIC3.83□□□□□ -1.8
LDB3O75112 BX276092.4-201ENST00000452056 248 ntBASIC3.83□□□□□ -1.8
LDB3O75112 RN7SL860P-201ENST00000473738 223 ntBASIC3.83□□□□□ -1.8
LDB3O75112 RPS4XP15-201ENST00000489210 795 ntBASIC3.83□□□□□ -1.8
LDB3O75112 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.83□□□□□ -1.8
LDB3O75112 AC116353.2-201ENST00000505332 712 ntBASIC3.83□□□□□ -1.8
LDB3O75112 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
LDB3O75112 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.83□□□□□ -1.8
LDB3O75112 MTCO1P35-201ENST00000515270 228 ntBASIC3.83□□□□□ -1.8
LDB3O75112 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.83□□□□□ -1.8
LDB3O75112 DEFB131D-201ENST00000526803 184 ntBASIC3.83□□□□□ -1.8
LDB3O75112 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.83□□□□□ -1.8
LDB3O75112 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.83□□□□□ -1.8
LDB3O75112 LSM6P2-201ENST00000552208 177 ntBASIC3.83□□□□□ -1.8
LDB3O75112 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.83□□□□□ -1.8
LDB3O75112 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.83□□□□□ -1.8
LDB3O75112 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.83□□□□□ -1.8
LDB3O75112 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.83□□□□□ -1.8
LDB3O75112 AC136619.2-201ENST00000563361 631 ntBASIC3.83□□□□□ -1.8
LDB3O75112 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.83□□□□□ -1.8
LDB3O75112 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.83□□□□□ -1.8
LDB3O75112 MIR4697-201ENST00000582977 78 ntBASIC3.83□□□□□ -1.8
LDB3O75112 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.83□□□□□ -1.8
LDB3O75112 AL606834.2-201ENST00000602954 668 ntBASIC3.83□□□□□ -1.8
LDB3O75112 AL596327.1-201ENST00000603629 213 ntBASIC3.83□□□□□ -1.8
LDB3O75112 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms