Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 LSM6P2-201ENST00000552208 177 ntBASIC4.01□□□□□ -1.77
LDB2O43679 GNRHR2P1-201ENST00000555315 631 ntBASIC4.01□□□□□ -1.77
LDB2O43679 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.01□□□□□ -1.77
LDB2O43679 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.01□□□□□ -1.77
LDB2O43679 MIR4512-201ENST00000583257 77 ntBASIC4.01□□□□□ -1.77
LDB2O43679 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.01□□□□□ -1.77
LDB2O43679 AC083760.1-201ENST00000589621 670 ntBASIC4.01□□□□□ -1.77
LDB2O43679 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.01□□□□□ -1.77
LDB2O43679 AC012065.4-201ENST00000602445 679 ntBASIC4.01□□□□□ -1.77
LDB2O43679 AL136363.2-201ENST00000604173 851 ntBASIC4.01□□□□□ -1.77
LDB2O43679 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.01□□□□□ -1.77
LDB2O43679 AC015540.1-201ENST00000615828 501 ntBASIC4.01□□□□□ -1.77
LDB2O43679 MIR6864-201ENST00000617935 70 ntBASIC4.01□□□□□ -1.77
LDB2O43679 AC233309.1-201ENST00000619522 751 ntBASIC4.01□□□□□ -1.77
LDB2O43679 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.01□□□□□ -1.77
LDB2O43679 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.01□□□□□ -1.77
LDB2O43679 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LDB2O43679 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
LDB2O43679 AC022893.2-201ENST00000564832 3296 ntBASIC4□□□□□ -1.77
LDB2O43679 RNA5SP399-201ENST00000364003 117 ntBASIC4□□□□□ -1.77
LDB2O43679 MIR1251-201ENST00000408552 70 ntBASIC4□□□□□ -1.77
LDB2O43679 RN7SKP27-201ENST00000410684 333 ntBASIC4□□□□□ -1.77
LDB2O43679 RPL17P12-201ENST00000413391 526 ntBASIC4□□□□□ -1.77
LDB2O43679 MTCO1P21-201ENST00000416634 589 ntBASIC4□□□□□ -1.77
LDB2O43679 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4□□□□□ -1.77
LDB2O43679 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4□□□□□ -1.77
LDB2O43679 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4□□□□□ -1.77
LDB2O43679 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4□□□□□ -1.77
LDB2O43679 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4□□□□□ -1.77
LDB2O43679 TBCAP1-201ENST00000436520 327 ntBASIC4□□□□□ -1.77
LDB2O43679 AC083863.1-201ENST00000438811 231 ntBASIC4□□□□□ -1.77
LDB2O43679 AC122718.1-201ENST00000439448 744 ntBASIC4□□□□□ -1.77
LDB2O43679 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4□□□□□ -1.77
LDB2O43679 DNAJC19P1-201ENST00000455312 319 ntBASIC4□□□□□ -1.77
LDB2O43679 FAM133DP-201ENST00000464802 691 ntBASIC4□□□□□ -1.77
LDB2O43679 AC010683.1-201ENST00000473673 378 ntBASIC4□□□□□ -1.77
LDB2O43679 AC087879.1-201ENST00000474343 374 ntBASIC4□□□□□ -1.77
LDB2O43679 CREM-230ENST00000474931 626 ntTSL 2 BASIC4□□□□□ -1.77
LDB2O43679 AL132838.2-201ENST00000492041 314 ntBASIC4□□□□□ -1.77
LDB2O43679 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4□□□□□ -1.77
LDB2O43679 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4□□□□□ -1.77
LDB2O43679 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4□□□□□ -1.77
LDB2O43679 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4□□□□□ -1.77
LDB2O43679 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4□□□□□ -1.77
LDB2O43679 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4□□□□□ -1.77
LDB2O43679 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4□□□□□ -1.77
LDB2O43679 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4□□□□□ -1.77
LDB2O43679 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4□□□□□ -1.77
LDB2O43679 HSPE1P3-201ENST00000559254 309 ntBASIC4□□□□□ -1.77
LDB2O43679 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4□□□□□ -1.77
LDB2O43679 AC106785.1-201ENST00000565935 262 ntBASIC4□□□□□ -1.77
LDB2O43679 AP001094.1-201ENST00000579805 193 ntBASIC4□□□□□ -1.77
LDB2O43679 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4□□□□□ -1.77
LDB2O43679 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4□□□□□ -1.77
LDB2O43679 AC128687.2-201ENST00000609657 566 ntBASIC4□□□□□ -1.77
LDB2O43679 AC068722.2-201ENST00000618734 544 ntBASIC4□□□□□ -1.77
LDB2O43679 AC000123.2-201ENST00000623124 461 ntBASIC4□□□□□ -1.77
LDB2O43679 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
LDB2O43679 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4□□□□□ -1.77
LDB2O43679 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4□□□□□ -1.77
LDB2O43679 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4□□□□□ -1.77
LDB2O43679 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4□□□□□ -1.77
LDB2O43679 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4□□□□□ -1.77
LDB2O43679 MTND4P26-201ENST00000415971 1359 ntBASIC4□□□□□ -1.77
LDB2O43679 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4□□□□□ -1.77
LDB2O43679 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4□□□□□ -1.77
LDB2O43679 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
LDB2O43679 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LDB2O43679 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
LDB2O43679 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
LDB2O43679 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
LDB2O43679 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
LDB2O43679 MTND5P28-201ENST00000438005 1594 ntBASIC3.99□□□□□ -1.77
LDB2O43679 MIR372-201ENST00000362225 67 ntBASIC3.99□□□□□ -1.77
LDB2O43679 RNU5F-6P-201ENST00000362979 116 ntBASIC3.99□□□□□ -1.77
LDB2O43679 Y_RNA.359-201ENST00000365498 102 ntBASIC3.99□□□□□ -1.77
LDB2O43679 RNA5SP283-201ENST00000365604 119 ntBASIC3.99□□□□□ -1.77
LDB2O43679 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
LDB2O43679 SNORA75-201ENST00000384158 137 ntBASIC3.99□□□□□ -1.77
LDB2O43679 MIR708-201ENST00000390708 88 ntBASIC3.99□□□□□ -1.77
LDB2O43679 AL121972.1-201ENST00000402023 252 ntBASIC3.99□□□□□ -1.77
LDB2O43679 ZNF603P-201ENST00000405613 487 ntBASIC3.99□□□□□ -1.77
LDB2O43679 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.99□□□□□ -1.77
LDB2O43679 AL023807.1-201ENST00000407932 359 ntBASIC3.99□□□□□ -1.77
LDB2O43679 AC004552.1-201ENST00000419089 348 ntBASIC3.99□□□□□ -1.77
LDB2O43679 RPS27AP14-201ENST00000422868 454 ntBASIC3.99□□□□□ -1.77
LDB2O43679 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LDB2O43679 NANOGP6-201ENST00000429190 847 ntBASIC3.99□□□□□ -1.77
LDB2O43679 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.99□□□□□ -1.77
LDB2O43679 SNRPEP7-201ENST00000438350 220 ntBASIC3.99□□□□□ -1.77
LDB2O43679 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.99□□□□□ -1.77
LDB2O43679 AC239367.2-201ENST00000447309 705 ntBASIC3.99□□□□□ -1.77
LDB2O43679 RPL7P31-201ENST00000450192 724 ntBASIC3.99□□□□□ -1.77
LDB2O43679 SSXP1-201ENST00000453640 473 ntBASIC3.99□□□□□ -1.77
LDB2O43679 TRBV26-201ENST00000456572 344 ntBASIC3.99□□□□□ -1.77
LDB2O43679 AC026410.2-201ENST00000460281 156 ntBASIC3.99□□□□□ -1.77
LDB2O43679 AC091564.1-201ENST00000464563 479 ntBASIC3.99□□□□□ -1.77
LDB2O43679 RPS26P3-201ENST00000470205 348 ntBASIC3.99□□□□□ -1.77
LDB2O43679 AC090543.2-201ENST00000483963 348 ntBASIC3.99□□□□□ -1.77
LDB2O43679 AC004057.1-201ENST00000485827 348 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms